| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gltP [H]
Identifier: 157962767
GI number: 157962767
Start: 3609712
End: 3610980
Strand: Direct
Name: gltP [H]
Synonym: Spea_2949
Alternate gene names: 157962767
Gene position: 3609712-3610980 (Clockwise)
Preceding gene: 157962764
Following gene: 157962772
Centisome position: 69.76
GC content: 47.6
Gene sequence:
>1269_bases ATGTTCAAATCATTATCATCCCGTATATTCGTTGGCTTATTTGCCGGCTTATTACTGGGCACACTTTTCCAATATGGCTT TAGCGAAAATAGCTTTGCCAATACCACACTTGTCGATATCGCATCAGGCGCTGGCAGCATGTTTGTCCAGCTCATCATGA TGCTGGTTGTACCGCTAGTCTTTTTCAGTATCGTTAGCGGTATTATCGAGCTGAAAGATCTAAAGTCATTCGGCCGACTC GGCAGTAAGACGTTTGGCTTGTACCTAGTCAATACCGTTATTGCGATTGCCGCAGCGATAGGTCTAGCACTACTGATAGC TCCTGGGCAAGGCATGCAGCTAACCGGAGAAGATGGCGCAGCCCTTACCTCCACCAGCTTGCCTAGCTTTATCGATATGA TTGTTAATATTATTCCAAGCAACCCTTTCCAGGCGTTTGCTGACGGCAATATGTTACAGATTATCTTTATGGCATTGCTC ACTGGCGGCATCATTAAGGCCCTAGGCGAAGATGTAAAACCCATAGTCACCTTCTTCAAGTACGGCAATAAAGTCATGCT TAAGGCGATTACCGTTGTTATGCAAGTCGCCCCTATTGGTGTGTTTGCGTTAATGGTAAAACTGGGTGCCACCTTCGAGC CATCGGCATTTGTCAGCGTATTGAGCTACATGGCGGTGATCTTAAGCTTACTCGCTGTATGGGCGCTTGTGGTGTATCCG GTAGTAGTTGGTATGACAACCAATATCTCCGCGGGTGAGTTTCGCCGTAAGACCCGCGAGCAGTTTCTGTTTGCCTTGTC GACCGCGAGTTCAAATGCGACTATTCCCGTCACCATGCGCACCTTAACCGACAAGCTTGGCGTAAAACCTAGCGTTGCAG GCTTTGGTGTACCTATGGGCGCGACCATGAATATGAGTGGTGTCGCGATATATATTACTGTCGCCGCTTTCTTTGTCGGT AATGCCTTTGGCTACCCTATCACCACAGATCAAATTCCAGCACTCGCCTTTAGTGTATTCCTACTGTCTATTGGTGCCGG TGGCGTTCCTGGTGGCGGTATTGTGATGATAGGTGTGCTTATTCATCAGATGGGCTTGCCTGTCGAAGCTATCGCATTAG TTGCTGCACTGGATCGTATCATCGATATGTTCTGTACTAGCACCAATGTGGTTGGTGACTCTGCTGTCGTCAGTATTGTT GATCACAGTGAGCAGCATGACTTATCTGCAGCAGCGTCACTGGATCTAAATACACAAACGCAAACTTAG
Upstream 100 bases:
>100_bases ACTTGTGAACCACGTCTCTTTAGTTGAATACTTTTTATACCAATCAGGGAGCGTTTATCTAAGGAAGGAAGTAACCAACA TCATTGAAGGCAGCAGACTT
Downstream 100 bases:
>100_bases CCGCGTACATAATCAGCTAGCTCGTCAATAGTCACCTATCACGTTAATAAACACTGATACGAAAAAAGGCACCCTAAGGT GCCTTTTTATTCGCTATCAC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MFKSLSSRIFVGLFAGLLLGTLFQYGFSENSFANTTLVDIASGAGSMFVQLIMMLVVPLVFFSIVSGIIELKDLKSFGRL GSKTFGLYLVNTVIAIAAAIGLALLIAPGQGMQLTGEDGAALTSTSLPSFIDMIVNIIPSNPFQAFADGNMLQIIFMALL TGGIIKALGEDVKPIVTFFKYGNKVMLKAITVVMQVAPIGVFALMVKLGATFEPSAFVSVLSYMAVILSLLAVWALVVYP VVVGMTTNISAGEFRRKTREQFLFALSTASSNATIPVTMRTLTDKLGVKPSVAGFGVPMGATMNMSGVAIYITVAAFFVG NAFGYPITTDQIPALAFSVFLLSIGAGGVPGGGIVMIGVLIHQMGLPVEAIALVAALDRIIDMFCTSTNVVGDSAVVSIV DHSEQHDLSAAASLDLNTQTQT
Sequences:
>Translated_422_residues MFKSLSSRIFVGLFAGLLLGTLFQYGFSENSFANTTLVDIASGAGSMFVQLIMMLVVPLVFFSIVSGIIELKDLKSFGRL GSKTFGLYLVNTVIAIAAAIGLALLIAPGQGMQLTGEDGAALTSTSLPSFIDMIVNIIPSNPFQAFADGNMLQIIFMALL TGGIIKALGEDVKPIVTFFKYGNKVMLKAITVVMQVAPIGVFALMVKLGATFEPSAFVSVLSYMAVILSLLAVWALVVYP VVVGMTTNISAGEFRRKTREQFLFALSTASSNATIPVTMRTLTDKLGVKPSVAGFGVPMGATMNMSGVAIYITVAAFFVG NAFGYPITTDQIPALAFSVFLLSIGAGGVPGGGIVMIGVLIHQMGLPVEAIALVAALDRIIDMFCTSTNVVGDSAVVSIV DHSEQHDLSAAASLDLNTQTQT >Mature_422_residues MFKSLSSRIFVGLFAGLLLGTLFQYGFSENSFANTTLVDIASGAGSMFVQLIMMLVVPLVFFSIVSGIIELKDLKSFGRL GSKTFGLYLVNTVIAIAAAIGLALLIAPGQGMQLTGEDGAALTSTSLPSFIDMIVNIIPSNPFQAFADGNMLQIIFMALL TGGIIKALGEDVKPIVTFFKYGNKVMLKAITVVMQVAPIGVFALMVKLGATFEPSAFVSVLSYMAVILSLLAVWALVVYP VVVGMTTNISAGEFRRKTREQFLFALSTASSNATIPVTMRTLTDKLGVKPSVAGFGVPMGATMNMSGVAIYITVAAFFVG NAFGYPITTDQIPALAFSVFLLSIGAGGVPGGGIVMIGVLIHQMGLPVEAIALVAALDRIIDMFCTSTNVVGDSAVVSIV DHSEQHDLSAAASLDLNTQTQT
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=427, Percent_Identity=28.8056206088993, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI169790839, Length=420, Percent_Identity=26.9047619047619, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI21314632, Length=411, Percent_Identity=27.4939172749392, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI66773030, Length=409, Percent_Identity=26.8948655256724, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI5032093, Length=396, Percent_Identity=28.030303030303, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI194239697, Length=266, Percent_Identity=31.203007518797, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI4827012, Length=271, Percent_Identity=28.7822878228782, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI223468564, Length=271, Percent_Identity=27.6752767527675, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI223468566, Length=271, Percent_Identity=27.6752767527675, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI262359914, Length=420, Percent_Identity=23.5714285714286, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI301601644, Length=176, Percent_Identity=32.3863636363636, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI1790514, Length=428, Percent_Identity=31.7757009345794, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1789947, Length=437, Percent_Identity=27.0022883295195, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788024, Length=368, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1789473, Length=290, Percent_Identity=30, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71983106, Length=426, Percent_Identity=30.0469483568075, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI71983099, Length=426, Percent_Identity=30.0469483568075, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17537407, Length=405, Percent_Identity=30.1234567901235, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71996953, Length=427, Percent_Identity=27.4004683840749, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI193206505, Length=444, Percent_Identity=26.8018018018018, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI193206654, Length=441, Percent_Identity=26.530612244898, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17541374, Length=425, Percent_Identity=26.3529411764706, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24583025, Length=441, Percent_Identity=25.1700680272109, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI17137668, Length=441, Percent_Identity=25.1700680272109, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI24583023, Length=441, Percent_Identity=25.1700680272109, Blast_Score=128, Evalue=7e-30, Organism=Drosophila melanogaster, GI281360483, Length=469, Percent_Identity=23.454157782516, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI17137666, Length=469, Percent_Identity=23.454157782516, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI281360481, Length=469, Percent_Identity=23.454157782516, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44276; Mature: 44276
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSLSSRIFVGLFAGLLLGTLFQYGFSENSFANTTLVDIASGAGSMFVQLIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHH FFSIVSGIIELKDLKSFGRLGSKTFGLYLVNTVIAIAAAIGLALLIAPGQGMQLTGEDGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCC ALTSTSLPSFIDMIVNIIPSNPFQAFADGNMLQIIFMALLTGGIIKALGEDVKPIVTFFK EEECCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YGNKVMLKAITVVMQVAPIGVFALMVKLGATFEPSAFVSVLSYMAVILSLLAVWALVVYP HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMTTNISAGEFRRKTREQFLFALSTASSNATIPVTMRTLTDKLGVKPSVAGFGVPMG HHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC ATMNMSGVAIYITVAAFFVGNAFGYPITTDQIPALAFSVFLLSIGAGGVPGGGIVMIGVL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAIALVAALDRIIDMFCTSTNVVGDSAVVSIVDHSEQHDLSAAASLDLNTQT HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCHHHHCCCCCCCC QT CC >Mature Secondary Structure MFKSLSSRIFVGLFAGLLLGTLFQYGFSENSFANTTLVDIASGAGSMFVQLIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHH FFSIVSGIIELKDLKSFGRLGSKTFGLYLVNTVIAIAAAIGLALLIAPGQGMQLTGEDGA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCC ALTSTSLPSFIDMIVNIIPSNPFQAFADGNMLQIIFMALLTGGIIKALGEDVKPIVTFFK EEECCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YGNKVMLKAITVVMQVAPIGVFALMVKLGATFEPSAFVSVLSYMAVILSLLAVWALVVYP HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVGMTTNISAGEFRRKTREQFLFALSTASSNATIPVTMRTLTDKLGVKPSVAGFGVPMG HHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC ATMNMSGVAIYITVAAFFVGNAFGYPITTDQIPALAFSVFLLSIGAGGVPGGGIVMIGVL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAIALVAALDRIIDMFCTSTNVVGDSAVVSIVDHSEQHDLSAAASLDLNTQT HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCHHHHCCCCCCCC QT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]