The gene/protein map for NC_009901 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is uspF [C]

Identifier: 157962681

GI number: 157962681

Start: 3494769

End: 3495212

Strand: Direct

Name: uspF [C]

Synonym: Spea_2862

Alternate gene names: 157962681

Gene position: 3494769-3495212 (Clockwise)

Preceding gene: 157962680

Following gene: 157962683

Centisome position: 67.54

GC content: 45.95

Gene sequence:

>444_bases
ATGGGTACTCACGATATCTTGTGTCCGATAGATTTTTCAGAAACATCGACTCATGCCTTAGGTTATGCCGTAGAGATGGC
AAGCTTATATAAGGTCAACATTAGGCTATTAAATGTGATGTCCCTACCTAACGTTGCACCGGATTTTGGCATAGTGATAA
ACGGCCCAACCGAGCAGTTTCAAGATCCTGAAGCCTATGCCAACGATAAGATAAAACAGATTGTGGCAGAGGTGCGAGAG
CAAATGCCTAGAGGGTTAATGGTACATACCAACGTTCGCAGTGGCGGCGTAGTCGAGCAAATTTTAGAGGAAGCTGACGA
GCAAAAAGTGGGCATGATAGTGATTGCTAGCAATGGTTTAACAGGCCTGTCTCACCTGTTAAACCCCAACGTCGCCGAGG
CCATCGCCAATCAGGCTAAGTGTCCTGTTCTCGTCGTTAAATAA

Upstream 100 bases:

>100_bases
CATGTATCCGCCTATATTTAAGGCTTATGTTTAAGACTTATGTCTACGGCTTGTGGTTACGGCTTAGATTTTCCAATACT
TGGTTTTTTATGGAGGGGTT

Downstream 100 bases:

>100_bases
TCCTATCTACTAGCATGCATTAATGATGCTTTGTAGCCAGCTTAAAGGCTAAGGCTTATCACTTAAGGTTAGGACATAAC
ACTGCATACTTAATAAAAGA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Universal Stress Protein UspA; Universal Stress Family Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGTHDILCPIDFSETSTHALGYAVEMASLYKVNIRLLNVMSLPNVAPDFGIVINGPTEQFQDPEAYANDKIKQIVAEVRE
QMPRGLMVHTNVRSGGVVEQILEEADEQKVGMIVIASNGLTGLSHLLNPNVAEAIANQAKCPVLVVK

Sequences:

>Translated_147_residues
MGTHDILCPIDFSETSTHALGYAVEMASLYKVNIRLLNVMSLPNVAPDFGIVINGPTEQFQDPEAYANDKIKQIVAEVRE
QMPRGLMVHTNVRSGGVVEQILEEADEQKVGMIVIASNGLTGLSHLLNPNVAEAIANQAKCPVLVVK
>Mature_146_residues
GTHDILCPIDFSETSTHALGYAVEMASLYKVNIRLLNVMSLPNVAPDFGIVINGPTEQFQDPEAYANDKIKQIVAEVREQ
MPRGLMVHTNVRSGGVVEQILEEADEQKVGMIVIASNGLTGLSHLLNPNVAEAIANQAKCPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15923; Mature: 15791

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTHDILCPIDFSETSTHALGYAVEMASLYKVNIRLLNVMSLPNVAPDFGIVINGPTEQF
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEECCCHHHH
QDPEAYANDKIKQIVAEVREQMPRGLMVHTNVRSGGVVEQILEEADEQKVGMIVIASNGL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCC
TGLSHLLNPNVAEAIANQAKCPVLVVK
HHHHHHCCCCHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
GTHDILCPIDFSETSTHALGYAVEMASLYKVNIRLLNVMSLPNVAPDFGIVINGPTEQF
CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEECCCHHHH
QDPEAYANDKIKQIVAEVREQMPRGLMVHTNVRSGGVVEQILEEADEQKVGMIVIASNGL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCC
TGLSHLLNPNVAEAIANQAKCPVLVVK
HHHHHHCCCCHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA