| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962666
Identifier: 157962666
GI number: 157962666
Start: 3474643
End: 3475680
Strand: Direct
Name: 157962666
Synonym: Spea_2847
Alternate gene names: NA
Gene position: 3474643-3475680 (Clockwise)
Preceding gene: 157962663
Following gene: 157962671
Centisome position: 67.15
GC content: 43.06
Gene sequence:
>1038_bases ATGAAAGGTACGATTGTTGGCGTTGATCTGGCTAAAAATGTAATTCAAGTTTGTGTCTTCACAAATAACAAGGTGCACTC AAATACTGAAATGACACCGAATGAATTTATCGACTGGCTGGCTAACTTTGCCACCGTAACCATCGTGTTCGAAGCTTGTG GAATGTCTAATTACTGGAAACAAAAAGCAATGACGTTTGGCCATGAGGCTAAGTTAATTTCAGCAAAGTTAGTCTCAGCT GTCAGGCAAAATCAAAAAACAGACAAAAATGATGCTTTAGCGATTGTTCAGGCGGCACTCTTGCCCGAGGTCAACTTCAT CACGGGTAAATCAGTCGAGCAGCAGCAACTGCAATCTATTATGAGACTACGAGAGCTGGCTATTAAACAAAAAACGGCGA TGACTAACCAGCTCACTTCATTATTAGCAGAGTTTAATCTGATGACGTCAACCAAACATGGCGGCTTACGCGGTGTGATT GAATCAACGTTAGAAGACGCTGAAAATGATTTTTCTTCTGAGTTTCGTAACGCTCTTGCGGCGGCCTGGCAACAGTATTT AGCTGTCGTCACATCTATAGCAACTTATGACCAGTGCTTGGAAAAGTCACTTAACACTCATCCTGAGGCTAAAAAACTAT TAAAAATTGAAGGGGTGGGTACTCTCAATGCTATTAATCTTTATATCGCATTAGGTTGCGCTGATATTGGTGTTGTTTCC ACAGGAAAAGATGCATCTGCCTGTATTGGATTAACGCCGATTCAATATTCTTCAGGTGGAAAGGCCAAACTGGGGTCCAT AGGAAAACACGTTAAGAATAGCATTCTCAGAAGCCAGTTAATCACAGGTGCGTTGTCAGCGGTTAGTCAAATGGTCAAAA GAGAACCCAAAACGACGAAGGAGCGCTGGGTTCAGGCTTTGGTTGAGCGACGGGGTAAGAAATGCGCCGCGGTGGCGTTA GCCAATAAGACGGTCAGAACTGCCTATGCCATGCTTACACAGGGTACAGAATATAAAGCAGAGTTAATTTCAGCGTAA
Upstream 100 bases:
>100_bases GCCAAAAGGTTCCACCAATTATCCCGTGTAGATAATTGGACTCCCCACTCTTTAATTCGTTACGGTATAAGTCAATTCTC ACGAGATTTCGGAGTTTAAA
Downstream 100 bases:
>100_bases AAGCGTTCAAACAACAAAAATGCACAATCGAAGATTAAAATCAGCCAGTTAAGGTAGCCCGTATCAAAGAGTCTTGAACT CGTCGTGTAGAATTATCAAC
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKGTIVGVDLAKNVIQVCVFTNNKVHSNTEMTPNEFIDWLANFATVTIVFEACGMSNYWKQKAMTFGHEAKLISAKLVSA VRQNQKTDKNDALAIVQAALLPEVNFITGKSVEQQQLQSIMRLRELAIKQKTAMTNQLTSLLAEFNLMTSTKHGGLRGVI ESTLEDAENDFSSEFRNALAAAWQQYLAVVTSIATYDQCLEKSLNTHPEAKKLLKIEGVGTLNAINLYIALGCADIGVVS TGKDASACIGLTPIQYSSGGKAKLGSIGKHVKNSILRSQLITGALSAVSQMVKREPKTTKERWVQALVERRGKKCAAVAL ANKTVRTAYAMLTQGTEYKAELISA
Sequences:
>Translated_345_residues MKGTIVGVDLAKNVIQVCVFTNNKVHSNTEMTPNEFIDWLANFATVTIVFEACGMSNYWKQKAMTFGHEAKLISAKLVSA VRQNQKTDKNDALAIVQAALLPEVNFITGKSVEQQQLQSIMRLRELAIKQKTAMTNQLTSLLAEFNLMTSTKHGGLRGVI ESTLEDAENDFSSEFRNALAAAWQQYLAVVTSIATYDQCLEKSLNTHPEAKKLLKIEGVGTLNAINLYIALGCADIGVVS TGKDASACIGLTPIQYSSGGKAKLGSIGKHVKNSILRSQLITGALSAVSQMVKREPKTTKERWVQALVERRGKKCAAVAL ANKTVRTAYAMLTQGTEYKAELISA >Mature_345_residues MKGTIVGVDLAKNVIQVCVFTNNKVHSNTEMTPNEFIDWLANFATVTIVFEACGMSNYWKQKAMTFGHEAKLISAKLVSA VRQNQKTDKNDALAIVQAALLPEVNFITGKSVEQQQLQSIMRLRELAIKQKTAMTNQLTSLLAEFNLMTSTKHGGLRGVI ESTLEDAENDFSSEFRNALAAAWQQYLAVVTSIATYDQCLEKSLNTHPEAKKLLKIEGVGTLNAINLYIALGCADIGVVS TGKDASACIGLTPIQYSSGGKAKLGSIGKHVKNSILRSQLITGALSAVSQMVKREPKTTKERWVQALVERRGKKCAAVAL ANKTVRTAYAMLTQGTEYKAELISA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 37533; Mature: 37533
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTIVGVDLAKNVIQVCVFTNNKVHSNTEMTPNEFIDWLANFATVTIVFEACGMSNYWK CCCCEEHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH QKAMTFGHEAKLISAKLVSAVRQNQKTDKNDALAIVQAALLPEVNFITGKSVEQQQLQSI HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRLRELAIKQKTAMTNQLTSLLAEFNLMTSTKHGGLRGVIESTLEDAENDFSSEFRNALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAWQQYLAVVTSIATYDQCLEKSLNTHPEAKKLLKIEGVGTLNAINLYIALGCADIGVVS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCHHHHHHHEEEEHHHCCEEE TGKDASACIGLTPIQYSSGGKAKLGSIGKHVKNSILRSQLITGALSAVSQMVKREPKTTK CCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ERWVQALVERRGKKCAAVALANKTVRTAYAMLTQGTEYKAELISA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MKGTIVGVDLAKNVIQVCVFTNNKVHSNTEMTPNEFIDWLANFATVTIVFEACGMSNYWK CCCCEEHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH QKAMTFGHEAKLISAKLVSAVRQNQKTDKNDALAIVQAALLPEVNFITGKSVEQQQLQSI HHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRLRELAIKQKTAMTNQLTSLLAEFNLMTSTKHGGLRGVIESTLEDAENDFSSEFRNALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAWQQYLAVVTSIATYDQCLEKSLNTHPEAKKLLKIEGVGTLNAINLYIALGCADIGVVS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCHHHHHHHEEEEHHHCCEEE TGKDASACIGLTPIQYSSGGKAKLGSIGKHVKNSILRSQLITGALSAVSQMVKREPKTTK CCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ERWVQALVERRGKKCAAVALANKTVRTAYAMLTQGTEYKAELISA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1324903; 12704232 [H]