| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962657
Identifier: 157962657
GI number: 157962657
Start: 3462838
End: 3463395
Strand: Direct
Name: 157962657
Synonym: Spea_2837
Alternate gene names: NA
Gene position: 3462838-3463395 (Clockwise)
Preceding gene: 157962656
Following gene: 157962663
Centisome position: 66.92
GC content: 32.8
Gene sequence:
>558_bases ATGCAGTATTTTGTGATGTTGCCCAAATTTGAAGATGAAGAAGGGCTATATCAAGAGAGTGATGAAAAAATGAATTTAAT GAATATTACCGACAAGCCATTACTTTTCTATAAGAAACCCTTATTAGAAGTTCAAGATATTTATACTCAAAGACGTTTTT CTGATGTTTTAAAAGCAGGATCTTGTATCAGTGTCAGTGATAAAGTTCAACGCATTTTCTTTGAACACGGATTTCAGGGA GCCCAGTTCATTCCTTTATTAGTGAATAATAATGGAACTCATGATGGTTATGCATTTATGCATAAAATTGCCACCTATGA CCTTCTTGACCCTATTACATCTGAAGCTGATGGTTTTTGTGTCGATGAAAATATATACACACACATCATCACTTTATATT TAGATAAAGCTAGATTCAAAACTACAAATATCGAACATGATATTTTTATGTGTAGTACTTATTGCAGTGAGTTCATTTGT AATGAACGAGTAAAAAAAGCACTCGAAGATGCGAATGTAACAGGAATAGAATTCGAACCAGTGGAGTTTTCATCATGA
Upstream 100 bases:
>100_bases CTGATAGTGAGTACAAAAAATCTCTATTCATCGATTTCATAGATATCAGAATAGGAATAAATGGGGTATTCGGCCGCTCC CTAATTAAAAGGAAAGTAAA
Downstream 100 bases:
>100_bases AAAGCAAATCATTTGCCACCCATTATAAATCAACAAGATAATACTAGCTTTCACTACTAGATTTCAAGAGGTGGTAAATT ATCGGCTCACACTTTTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MQYFVMLPKFEDEEGLYQESDEKMNLMNITDKPLLFYKKPLLEVQDIYTQRRFSDVLKAGSCISVSDKVQRIFFEHGFQG AQFIPLLVNNNGTHDGYAFMHKIATYDLLDPITSEADGFCVDENIYTHIITLYLDKARFKTTNIEHDIFMCSTYCSEFIC NERVKKALEDANVTGIEFEPVEFSS
Sequences:
>Translated_185_residues MQYFVMLPKFEDEEGLYQESDEKMNLMNITDKPLLFYKKPLLEVQDIYTQRRFSDVLKAGSCISVSDKVQRIFFEHGFQG AQFIPLLVNNNGTHDGYAFMHKIATYDLLDPITSEADGFCVDENIYTHIITLYLDKARFKTTNIEHDIFMCSTYCSEFIC NERVKKALEDANVTGIEFEPVEFSS >Mature_185_residues MQYFVMLPKFEDEEGLYQESDEKMNLMNITDKPLLFYKKPLLEVQDIYTQRRFSDVLKAGSCISVSDKVQRIFFEHGFQG AQFIPLLVNNNGTHDGYAFMHKIATYDLLDPITSEADGFCVDENIYTHIITLYLDKARFKTTNIEHDIFMCSTYCSEFIC NERVKKALEDANVTGIEFEPVEFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21467; Mature: 21467
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYFVMLPKFEDEEGLYQESDEKMNLMNITDKPLLFYKKPLLEVQDIYTQRRFSDVLKAG CCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC SCISVSDKVQRIFFEHGFQGAQFIPLLVNNNGTHDGYAFMHKIATYDLLDPITSEADGFC CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE VDENIYTHIITLYLDKARFKTTNIEHDIFMCSTYCSEFICNERVKKALEDANVTGIEFEP ECCCHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC VEFSS CCCCC >Mature Secondary Structure MQYFVMLPKFEDEEGLYQESDEKMNLMNITDKPLLFYKKPLLEVQDIYTQRRFSDVLKAG CCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC SCISVSDKVQRIFFEHGFQGAQFIPLLVNNNGTHDGYAFMHKIATYDLLDPITSEADGFC CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE VDENIYTHIITLYLDKARFKTTNIEHDIFMCSTYCSEFICNERVKKALEDANVTGIEFEP ECCCHHHHHHHHHHHCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC VEFSS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA