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The map label for this gene is ybeQ [H]

Identifier: 157962656

GI number: 157962656

Start: 3461462

End: 3462604

Strand: Direct

Name: ybeQ [H]

Synonym: Spea_2836

Alternate gene names: 157962656

Gene position: 3461462-3462604 (Clockwise)

Preceding gene: 157962654

Following gene: 157962657

Centisome position: 66.89

GC content: 45.32

Gene sequence:

>1143_bases
ATGAGAGTTTTAATTTTATTCATAGTTTTCTTGTTGGGCGGGTGTGTAAGCTCTGATAGGAGTTCTGAGAGGAGCCCAGA
CTTTGCCATTGAGTTGCATCGCAAAGCGGCAGAGCAAGGCGTTGCAGACGCGCAATATACACTCGAGACCATATATGATT
ATGGAATTAACGTACCAGTGAACAGACAAGAAGCCATTAAATGGTATCGCAAAGCGGCAGAACAAGGCGTTGCAGACGCG
CAATATACACTCGGGACCATATATGATTATGGAATGGGCATACCGGAGAACAGACAAGAAGCCATTAAATGGTATCGCAA
AGCGGCAGAACAAGGCGTTGCAGACGCGCAATATACACTCGGGACCATATATGATTATGGGATTGACGTATCAGAGAACA
GACAAGAAGCACTGGATTGGTATTACCTGGCCGCAGAGCAAAATCATGTCGATGCACTTTATGCTATCGGCATGATCTTT
CATTCAACGAAGGAAGATTATCCAGAAGCAATCTATTGGATTAAAAAAGCCGCAGATAAGGGCCTTGATGAAGCACAGTA
TGATTTGGCTAGAATGCTTTATTTTGGGGTCGGAACTGAGGAAAACAAACAGCAAGCGTTTATTTGGTATCTGAAAGCCG
CTGAGCAAGGCCATGTTGCAGCCCAATTTTATGTTGGTTCTGCTTATGATTTTGCGCAAGGAGTTGCAGAAAACAAAACA
AACGCCTTTGTTTGGTATCAGAAGGCGGCTAATGAGGGGTATGCAAAAGCCCAGTTTCACTTAGGCTCAATGTACGAACT
AGGGGAAGGTACAACAGTTAATAAAGCCAAAGCCATAAGGTGCTATTTGAAAGCGGCTGAACAAGGGCTACCCGATGCGC
AGCATAACCTTGGGGTGATGTTTGAACTGGGCGATGGAGTGGTCAAAAACATGCCTGAGGCAATAACATGGTACACGGCC
GCGGCCAAGCAAGGAAATGCTGAATCACAGTATGTATTGGGCACCATATATGAATCGGATAAGAGTGAACCACAGAATCT
ACATATTGCAGACATGTGGTATCAAGGAGCGGCAGCGCTGGGACATCAGAAAGCGCTAGAAGCGTTAAAGCAAAATCGCA
CGGAACCCCGCACAATGCATTAA

Upstream 100 bases:

>100_bases
CTTTTAGATTTCAACAGGTGGTAAATTATCGGATCACGCTTTTTGGGATCGCTAAAAGCGACAAAAAATCGTCAAAGACT
TGTGTTGTAAGAGAGTGGAT

Downstream 100 bases:

>100_bases
TGTCTGATGTTACGACTAGGTCTGACACTTCTATTTGAAAAGAAGAATGCCTACAGTTCAAGACTTTTAAGAACTCTATT
TTTACCTTGGTGTTTTCATG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRVLILFIVFLLGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADA
QYTLGTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLAAEQNHVDALYAIGMIF
HSTKEDYPEAIYWIKKAADKGLDEAQYDLARMLYFGVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKT
NAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVMFELGDGVVKNMPEAITWYTA
AAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAALGHQKALEALKQNRTEPRTMH

Sequences:

>Translated_380_residues
MRVLILFIVFLLGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADA
QYTLGTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLAAEQNHVDALYAIGMIF
HSTKEDYPEAIYWIKKAADKGLDEAQYDLARMLYFGVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKT
NAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVMFELGDGVVKNMPEAITWYTA
AAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAALGHQKALEALKQNRTEPRTMH
>Mature_380_residues
MRVLILFIVFLLGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPVNRQEAIKWYRKAAEQGVADA
QYTLGTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTLGTIYDYGIDVSENRQEALDWYYLAAEQNHVDALYAIGMIF
HSTKEDYPEAIYWIKKAADKGLDEAQYDLARMLYFGVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKT
NAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVMFELGDGVVKNMPEAITWYTA
AAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAALGHQKALEALKQNRTEPRTMH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=369, Percent_Identity=27.9132791327913, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI19923669, Length=313, Percent_Identity=31.3099041533546, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI217330658, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI217330656, Length=208, Percent_Identity=29.3269230769231, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI154689719, Length=346, Percent_Identity=28.0346820809249, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081769, Length=281, Percent_Identity=37.0106761565836, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1786867, Length=171, Percent_Identity=32.7485380116959, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563256, Length=330, Percent_Identity=27.5757575757576, Blast_Score=94, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=286, Percent_Identity=27.972027972028, Blast_Score=90, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6319998, Length=325, Percent_Identity=28.6153846153846, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21355295, Length=321, Percent_Identity=25.8566978193146, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 42726; Mature: 42726

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLILFIVFLLGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPV
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NRQEAIKWYRKAAEQGVADAQYTLGTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
GTIYDYGIDVSENRQEALDWYYLAAEQNHVDALYAIGMIFHSTKEDYPEAIYWIKKAADK
HHHHCCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GLDEAQYDLARMLYFGVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKT
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCC
NAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVM
CEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
FELGDGVVKNMPEAITWYTAAAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAAL
EECCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
GHQKALEALKQNRTEPRTMH
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVLILFIVFLLGGCVSSDRSSERSPDFAIELHRKAAEQGVADAQYTLETIYDYGINVPV
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NRQEAIKWYRKAAEQGVADAQYTLGTIYDYGMGIPENRQEAIKWYRKAAEQGVADAQYTL
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
GTIYDYGIDVSENRQEALDWYYLAAEQNHVDALYAIGMIFHSTKEDYPEAIYWIKKAADK
HHHHCCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GLDEAQYDLARMLYFGVGTEENKQQAFIWYLKAAEQGHVAAQFYVGSAYDFAQGVAENKT
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCC
NAFVWYQKAANEGYAKAQFHLGSMYELGEGTTVNKAKAIRCYLKAAEQGLPDAQHNLGVM
CEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
FELGDGVVKNMPEAITWYTAAAKQGNAESQYVLGTIYESDKSEPQNLHIADMWYQGAAAL
EECCCCHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
GHQKALEALKQNRTEPRTMH
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]