The gene/protein map for NC_009901 is currently unavailable.
Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962543

Identifier: 157962543

GI number: 157962543

Start: 3328529

End: 3329527

Strand: Direct

Name: 157962543

Synonym: Spea_2722

Alternate gene names: NA

Gene position: 3328529-3329527 (Clockwise)

Preceding gene: 157962542

Following gene: 157962544

Centisome position: 64.32

GC content: 40.64

Gene sequence:

>999_bases
ATGCTTAATAAAACAGTGGTCGCTCTCAGTGTGTCTTTGTTATTAGGAGCATGTGCTTCTAGCCCTGAGAACGTCTGCCA
CCCGAATACTATGGTGAATATTGAAACCTCTGATGTTCCAACAATAAAAAGCGGTGATAAGCAATATATTGTATTACCAA
TTGATATTAATTTTGAAGAGTCTGCAGCTGACAAGTTGAAAGCTACTCTGATAAATCAACTTGAAACACAACTTATAAAT
TCCGGTGTTAAGGTTGTTGATCGCAATTTAGCCCGCAAACTCCAAACCGAAATAAAGCTCGCTGAACAAAGTGGACGCTA
TAACACCAAGGGCGTGCCTATTGCTGACTTTGCTATTATCACAGAAGTTACTAAGAGTGAACTCAGTAAATCTCATAATG
AAACCCGCTACTATGAGAATAAAGATGGTGAGACAAAAAAAATTCCGGCTAGCTGTGACTACCGAGTCGAATTTGCAGCA
ATAACAAAAGTCGTATCACTACCAAATATGGCATTGATCAAGCGTATTGAGCTAAGGGGGAATGACTCTTTTAGCACAGA
AACCACCAACTCAAGATGCCCTATTTCTGAAGCGCAATATTCTGGGTTAGCATTAGCATCTGCAATTGAGTCTATTGAGC
ATGATGGTGAGTTGAAAGAGTTACTTGCCCCGAGCGCACCAGTATTAGAATTGCGCCATTGCGATAGTGGTCCAATGGTA
AAGATCGGCATGGGCTCAAAGACGAACATTCAACCTGACACTGAAGTTTCATTTGCTAATGCTATTAAAAACTCAGAGGG
TGAAATAGAAACCTTTGCCGTTGGTGAAGGAGATGTAGTCGATATCCCAATGCATGGCATTAAGCCTGAATACTCTTGGG
TTATGATCAATGAAGAAACCGCTTTAAAAATCAAGAAAGGTGATGAGGCGAGAATTGTTCCTAAGCGTTGTAGTAGTTAT
CTCGACCTTGAATGCCAAGCACGGGCTATAGGATTATAA

Upstream 100 bases:

>100_bases
AGAAGGGGCAGAGCGTCATTTCTCAACCCTCGTCGATGAGCGCGGACTCTGGCCCGCTCTGGGTTTAACATTATAATAAT
ATAAAACAATGGAGTTAAAG

Downstream 100 bases:

>100_bases
TCGTGAGAAAAACTTTATTAATAAGTGCCTTAACACTGACTTTAACGGCCTGTTCTTCTACTCAGACTGTTGAACAAGCG
CAGCAATTTGCTGACTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLNKTVVALSVSLLLGACASSPENVCHPNTMVNIETSDVPTIKSGDKQYIVLPIDINFEESAADKLKATLINQLETQLIN
SGVKVVDRNLARKLQTEIKLAEQSGRYNTKGVPIADFAIITEVTKSELSKSHNETRYYENKDGETKKIPASCDYRVEFAA
ITKVVSLPNMALIKRIELRGNDSFSTETTNSRCPISEAQYSGLALASAIESIEHDGELKELLAPSAPVLELRHCDSGPMV
KIGMGSKTNIQPDTEVSFANAIKNSEGEIETFAVGEGDVVDIPMHGIKPEYSWVMINEETALKIKKGDEARIVPKRCSSY
LDLECQARAIGL

Sequences:

>Translated_332_residues
MLNKTVVALSVSLLLGACASSPENVCHPNTMVNIETSDVPTIKSGDKQYIVLPIDINFEESAADKLKATLINQLETQLIN
SGVKVVDRNLARKLQTEIKLAEQSGRYNTKGVPIADFAIITEVTKSELSKSHNETRYYENKDGETKKIPASCDYRVEFAA
ITKVVSLPNMALIKRIELRGNDSFSTETTNSRCPISEAQYSGLALASAIESIEHDGELKELLAPSAPVLELRHCDSGPMV
KIGMGSKTNIQPDTEVSFANAIKNSEGEIETFAVGEGDVVDIPMHGIKPEYSWVMINEETALKIKKGDEARIVPKRCSSY
LDLECQARAIGL
>Mature_332_residues
MLNKTVVALSVSLLLGACASSPENVCHPNTMVNIETSDVPTIKSGDKQYIVLPIDINFEESAADKLKATLINQLETQLIN
SGVKVVDRNLARKLQTEIKLAEQSGRYNTKGVPIADFAIITEVTKSELSKSHNETRYYENKDGETKKIPASCDYRVEFAA
ITKVVSLPNMALIKRIELRGNDSFSTETTNSRCPISEAQYSGLALASAIESIEHDGELKELLAPSAPVLELRHCDSGPMV
KIGMGSKTNIQPDTEVSFANAIKNSEGEIETFAVGEGDVVDIPMHGIKPEYSWVMINEETALKIKKGDEARIVPKRCSSY
LDLECQARAIGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36288; Mature: 36288

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKTVVALSVSLLLGACASSPENVCHPNTMVNIETSDVPTIKSGDKQYIVLPIDINFEE
CCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCH
SAADKLKATLINQLETQLINSGVKVVDRNLARKLQTEIKLAEQSGRYNTKGVPIADFAII
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TEVTKSELSKSHNETRYYENKDGETKKIPASCDYRVEFAAITKVVSLPNMALIKRIELRG
HHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEHHHHHHHHHCCCCHHHHEEEEECC
NDSFSTETTNSRCPISEAQYSGLALASAIESIEHDGELKELLAPSAPVLELRHCDSGPMV
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCEE
KIGMGSKTNIQPDTEVSFANAIKNSEGEIETFAVGEGDVVDIPMHGIKPEYSWVMINEET
EEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEECCCE
ALKIKKGDEARIVPKRCSSYLDLECQARAIGL
EEEEECCCCCEECHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLNKTVVALSVSLLLGACASSPENVCHPNTMVNIETSDVPTIKSGDKQYIVLPIDINFEE
CCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCH
SAADKLKATLINQLETQLINSGVKVVDRNLARKLQTEIKLAEQSGRYNTKGVPIADFAII
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TEVTKSELSKSHNETRYYENKDGETKKIPASCDYRVEFAAITKVVSLPNMALIKRIELRG
HHHHHHHHHHCCCCCCCEECCCCCCEECCCCCCCEEHHHHHHHHHCCCCHHHHEEEEECC
NDSFSTETTNSRCPISEAQYSGLALASAIESIEHDGELKELLAPSAPVLELRHCDSGPMV
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCEE
KIGMGSKTNIQPDTEVSFANAIKNSEGEIETFAVGEGDVVDIPMHGIKPEYSWVMINEET
EEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEECCCE
ALKIKKGDEARIVPKRCSSYLDLECQARAIGL
EEEEECCCCCEECHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA