| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962544
Identifier: 157962544
GI number: 157962544
Start: 3329500
End: 3330129
Strand: Direct
Name: 157962544
Synonym: Spea_2723
Alternate gene names: NA
Gene position: 3329500-3330129 (Clockwise)
Preceding gene: 157962543
Following gene: 157962545
Centisome position: 64.34
GC content: 43.81
Gene sequence:
>630_bases ATGCCAAGCACGGGCTATAGGATTATAATCGTGAGAAAAACTTTATTAATAAGTGCCTTAACACTGACTTTAACGGCCTG TTCTTCTACTCAGACTGTTGAACAAGCGCAGCAATTTGCTGACTGTACCTTCCCCGATGCCCCAACTGCTGAAGCACCAT CATGGATCTGTGACGTAATGCCTACAGATTTGGCCGCTGGCGGCATGGGTTACGCGAAAAAGAGCGCTGCAGGCATGAAC GTAATGCGCAAGATTGCCATTAACGATGCCAGAGTACAGCTAGCCTCTCAGTTTCAAATTGATGTCAACAATATGTTCAA ACAAGCCATCAATAGCACTGTTAATACCACTACACAGGAAGGTGCCAACGAAAATGTTGTTGAAACATTTGAAAATGTCA CTAAAAACGTCGTCACGCGCTCTCTTTCAAATAGCAAAGTGATCGTCAGTCAGGTTAGCCCTAGCGGTGGTTTATATGTG TTAGTGGGTATGGATAAAGAAAGCTACCAAGCTAACGTCAACACTGTGATTGACACCGCCAATCAAGATGCCAGCTTGTG GAATAAGTTCAATAACGAGAAAGCCGCCGAAGATTTATCCAAGGCGTTAGAATCGCTTAAAGCAATATAA
Upstream 100 bases:
>100_bases ACTCTTGGGTTATGATCAATGAAGAAACCGCTTTAAAAATCAAGAAAGGTGATGAGGCGAGAATTGTTCCTAAGCGTTGT AGTAGTTATCTCGACCTTGA
Downstream 100 bases:
>100_bases AACAAACTATTAGAGGCTATTTTGATAGCCTCTTTTTATACTTGGCATAATAGAGAAAACAATGAACTACTATTACAAGT CCCTCATCGCCTTTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPSTGYRIIIVRKTLLISALTLTLTACSSTQTVEQAQQFADCTFPDAPTAEAPSWICDVMPTDLAAGGMGYAKKSAAGMN VMRKIAINDARVQLASQFQIDVNNMFKQAINSTVNTTTQEGANENVVETFENVTKNVVTRSLSNSKVIVSQVSPSGGLYV LVGMDKESYQANVNTVIDTANQDASLWNKFNNEKAAEDLSKALESLKAI
Sequences:
>Translated_209_residues MPSTGYRIIIVRKTLLISALTLTLTACSSTQTVEQAQQFADCTFPDAPTAEAPSWICDVMPTDLAAGGMGYAKKSAAGMN VMRKIAINDARVQLASQFQIDVNNMFKQAINSTVNTTTQEGANENVVETFENVTKNVVTRSLSNSKVIVSQVSPSGGLYV LVGMDKESYQANVNTVIDTANQDASLWNKFNNEKAAEDLSKALESLKAI >Mature_208_residues PSTGYRIIIVRKTLLISALTLTLTACSSTQTVEQAQQFADCTFPDAPTAEAPSWICDVMPTDLAAGGMGYAKKSAAGMNV MRKIAINDARVQLASQFQIDVNNMFKQAINSTVNTTTQEGANENVVETFENVTKNVVTRSLSNSKVIVSQVSPSGGLYVL VGMDKESYQANVNTVIDTANQDASLWNKFNNEKAAEDLSKALESLKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22509; Mature: 22377
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTGYRIIIVRKTLLISALTLTLTACSSTQTVEQAQQFADCTFPDAPTAEAPSWICDVM CCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC PTDLAAGGMGYAKKSAAGMNVMRKIAINDARVQLASQFQIDVNNMFKQAINSTVNTTTQE CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCHHC GANENVVETFENVTKNVVTRSLSNSKVIVSQVSPSGGLYVLVGMDKESYQANVNTVIDTA CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHCCCHHEEECC NQDASLWNKFNNEKAAEDLSKALESLKAI CCCHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSTGYRIIIVRKTLLISALTLTLTACSSTQTVEQAQQFADCTFPDAPTAEAPSWICDVM CCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC PTDLAAGGMGYAKKSAAGMNVMRKIAINDARVQLASQFQIDVNNMFKQAINSTVNTTTQE CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCHHC GANENVVETFENVTKNVVTRSLSNSKVIVSQVSPSGGLYVLVGMDKESYQANVNTVIDTA CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHCCCHHEEECC NQDASLWNKFNNEKAAEDLSKALESLKAI CCCHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA