| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is glxK [H]
Identifier: 157962535
GI number: 157962535
Start: 3317068
End: 3318222
Strand: Direct
Name: glxK [H]
Synonym: Spea_2714
Alternate gene names: 157962535
Gene position: 3317068-3318222 (Clockwise)
Preceding gene: 157962534
Following gene: 157962536
Centisome position: 64.1
GC content: 50.22
Gene sequence:
>1155_bases ATGAAAATTGTGATAGCCCCAGACTCTTTCAAAGAAAGCCTAAGCGCAATGGAAGTGGCTAACGAGATTGAACGTGGATT TCGCAGCGTACTGCCCAGCGCTGAATATATCAAAGTACCTGTTGCCGATGGCGGCGAAGGCACTGTGCAGTCAATGGTTG ATGCCACAGACGGCACCATCATCACCCTCGATGTCACGGGCCCGTTAGGCGATAAAGTTGAAGCCTTTTATGGCATTTTA GGCGCAGGCTTTAAGGGAAAGAAAAAAACCGCCGTGATCGAAATGGCAGCAGCATCGGGGCTACATTTAGTTACTGAAGA CAAGCGAAATCCACTTATTACTACCAGTTACGGCACAGGTGAGTTGATTGTCGATGCCCTCAATCGCGGTATTAAACATA TCATCATCGGCCTTGGCGGCAGCGCCACTAATGATGGTGGTGCAGGTATGGCGCAGGCCATAGGTGCCCATCTGCTCAAT AGCGCTGGCAAGGCACTCTCTCCTGGAGGAGTTGCTTTGGCGGAACTAGCCAGTATTGATTTAACTGACTTACACCCGCT TATTACAAAGTGTACTTTTGAAGTGGCCTGTGATGTGAATAATCCACTTTGTGGAGAAAAAGGTGCCTCGGCTATTTTTG GTCCACAAAAAGGCGCGACTCCAGAAATGGTGCTGCAGCTCGATACTGCTCTAGGCCATTACGCAGATATCATTGAACGC TCAGGCATAGCAGATAATCGTAACACTCCCGGCGCAGGGGCTGCTGGCGGTATGGGTTTAGGCGTGATGAGCTTTTTAAA TGCCGAGCTAAAACCTGGCATAGATATCGTAATGCAAACCGTTAACTTGGCAGGTTTAAGTCAAGGCGCCGACCTCGTAA TTACTGGTGAAGGCCGCCTCGACAGCCAGACTCTGCATGGTAAAACGCCTATGGGCGTCGCCGGTGTCGCTAAAGCCCAA GGGATAAAAGTGATTGCCATCGCTGGCTGCGTGAGCGATGACGCCAACATCTTACTGGAACATGGCATTGACGCGCTGTT CTCTATAACGCCAAGAGCTCTGCCCCTTGCCGAGGTCCTTAGCAGCGCTAAACATAACCTGTACAGCACGGCTAAAAACA TCGCTGCACTGTACGCGTTATCGGCAGCTAAATAA
Upstream 100 bases:
>100_bases TGTAATCAACGAAAATACTTGGTTACGCGTCAAAATGACCCCATACATATTAAGATTAGTCTGATTCAACTCGTTGAATT TAGTCTTATAGGAATACTGC
Downstream 100 bases:
>100_bases CCAGCGCATAACCACTAATGCTACTCACTTAAGCAAATGACTTAAACAAGTGACTCAGAGTTTGATAACTTCGAAAGATA AGACTGGACCACAGAGGACA
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK
Sequences:
>Translated_384_residues MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK >Mature_384_residues MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=57.1808510638298, Blast_Score=398, Evalue=1e-112, Organism=Escherichia coli, GI145693185, Length=380, Percent_Identity=55.5263157894737, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39162; Mature: 39162
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTI CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEE ITLDVTGPLGDKVEAFYGILGAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTG EEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCH ELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLNSAGKALSPGGVALAELASID HHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC LTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRL CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC DSQTLHGKTPMGVAGVAKAQGIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVL CCCEECCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCHHHHHCCCCCCCHHHHH SSAKHNLYSTAKNIAALYALSAAK HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTI CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEE ITLDVTGPLGDKVEAFYGILGAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTG EEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCH ELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLNSAGKALSPGGVALAELASID HHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC LTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRL CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC DSQTLHGKTPMGVAGVAKAQGIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVL CCCEECCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCHHHHHCCCCCCCHHHHH SSAKHNLYSTAKNIAALYALSAAK HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]