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The map label for this gene is dsdX [C]

Identifier: 157962534

GI number: 157962534

Start: 3315554

End: 3316912

Strand: Direct

Name: dsdX [C]

Synonym: Spea_2713

Alternate gene names: 157962534

Gene position: 3315554-3316912 (Clockwise)

Preceding gene: 157962525

Following gene: 157962535

Centisome position: 64.07

GC content: 47.76

Gene sequence:

>1359_bases
ATGAGCCTAGTACTGATCTTATTGGCCGTGATTGCGTTTATCGTCATAGCCACAGCTAAATTTAAGCTTCACCCGTTTCT
AACCCTTATTCTTGCATCGTTTCTTGCCGCCTTTGCCTACGGCCTACCGAGCGCTGATATCGCTAAAACCATCACCTCAG
GTTTCGGCGGGATCTTGGGCTACATTGGTCTAGTTATCGTATTAGGTACCATCATAGGTACTATCTTAGAAAAGAGCGGC
GCGGCAATTACCATGGCAGATGTGGTCATTAAAGTACTCGGTAAGCGCTTTCCAACACTGACCATGTCGATTATCGGTTA
TATCGTATCGATCCCAGTATTTTGTGACTCAGGCTTTGTGATCTTAAATTCGCTTAAGCAGTCTATGGCTAACCGCATGA
AGGTGTCGAGCGTGTCTATGAGCGTTGCACTCGCAACGGGTCTATATGCCACTCACACCTTTGTGCCACCAACACCAGGT
CCAATCGCCGCTGCCGGTAACTTAGGTCTTGAGTCAAACCTTGGCTTAGTGATTTTTGTCGGTATTTTCGTTGCTGCAGT
TGCTGCATTAGCCGGTACGCTTTGGGCAAACCGTTTCGCAAATACTCAGCCTGATGGCGAAGGTGCTGAAGAACTCCTAA
GTCAAAAAGAAGATTTTGATAACCTGAAGCAAGCCTATGGTGAGCTCCCTAGCCCAACTCGTGCATTTGCACCGATTTTC
GTGCCAATTCTACTTATCTGTTTGGGCTCTGTTGCCAACTTCCCATCGGCCCCAATCGGCGATGGCATGCTTTTCGACAT
ATTGGCCTTCTTAGGTCAGCCCGTTAATGCCTTGATGATTGGTCTATTCCTGTCACTATCGCTATTGAAGGGCAATGATA
AAATTAAAGAGTTTAGTGACCGTATTAGCCAAGGCTTAGTGGTTGCAGCACCGATTCTATTGATCACAGGTGCAGGCGGG
GCATTTGGCGCCGTACTAAAAGCAACCGATATCGGTACCTTCCTAGGTGAGTCACTGTCAGCTCTTGGCATTGGCATCTT
TATGCCATTTATTGTTGCTGCAGCGCTTAAGTCGGCTCAAGGCTCGTCAACAGTAGCACTAGTGGCAACTTCTGCGCTCG
TTGCGCCTATGCTAGGTGATATCGGTCTTGCCAGTGATATGGGCCGCGTACTGACGGTTATGGCCATTGGTGCGGGTGCG
ATGACAGTATCTCATGCAAACGACAGCTTCTTCTGGGTAGTGACTCAGTTTAGCCGCATGAGTGTTAAGCAAGCTTACAA
AGCCCAAACCATGGCAACGCTAATTCAAGGCGTGACAGCAATGGCTTTAGTTTATCTACTCAGCTTAGTGTTGCTATAA

Upstream 100 bases:

>100_bases
TTCGGCCTGAAATACCTTGGTGCGCTGTCAGTCTCAGCGCTCCCTACTCGGCATAAATAAAACAAACCTTACATATAAAA
ATACCCAAACAGGGATCCCT

Downstream 100 bases:

>100_bases
ACACAAGCAGCTCTGAAATAGGCGAGCATAAAACTGCTCGCCTATTATCAACTAGTGTAATCAACGAAAATACTTGGTTA
CGCGTCAAAATGACCCCATA

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSLVLILLAVIAFIVIATAKFKLHPFLTLILASFLAAFAYGLPSADIAKTITSGFGGILGYIGLVIVLGTIIGTILEKSG
AAITMADVVIKVLGKRFPTLTMSIIGYIVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPG
PIAAAGNLGLESNLGLVIFVGIFVAAVAALAGTLWANRFANTQPDGEGAEELLSQKEDFDNLKQAYGELPSPTRAFAPIF
VPILLICLGSVANFPSAPIGDGMLFDILAFLGQPVNALMIGLFLSLSLLKGNDKIKEFSDRISQGLVVAAPILLITGAGG
AFGAVLKATDIGTFLGESLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLASDMGRVLTVMAIGAGA
MTVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMALVYLLSLVLL

Sequences:

>Translated_452_residues
MSLVLILLAVIAFIVIATAKFKLHPFLTLILASFLAAFAYGLPSADIAKTITSGFGGILGYIGLVIVLGTIIGTILEKSG
AAITMADVVIKVLGKRFPTLTMSIIGYIVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPG
PIAAAGNLGLESNLGLVIFVGIFVAAVAALAGTLWANRFANTQPDGEGAEELLSQKEDFDNLKQAYGELPSPTRAFAPIF
VPILLICLGSVANFPSAPIGDGMLFDILAFLGQPVNALMIGLFLSLSLLKGNDKIKEFSDRISQGLVVAAPILLITGAGG
AFGAVLKATDIGTFLGESLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLASDMGRVLTVMAIGAGA
MTVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMALVYLLSLVLL
>Mature_451_residues
SLVLILLAVIAFIVIATAKFKLHPFLTLILASFLAAFAYGLPSADIAKTITSGFGGILGYIGLVIVLGTIIGTILEKSGA
AITMADVVIKVLGKRFPTLTMSIIGYIVSIPVFCDSGFVILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPGP
IAAAGNLGLESNLGLVIFVGIFVAAVAALAGTLWANRFANTQPDGEGAEELLSQKEDFDNLKQAYGELPSPTRAFAPIFV
PILLICLGSVANFPSAPIGDGMLFDILAFLGQPVNALMIGLFLSLSLLKGNDKIKEFSDRISQGLVVAAPILLITGAGGA
FGAVLKATDIGTFLGESLSALGIGIFMPFIVAAALKSAQGSSTVALVATSALVAPMLGDIGLASDMGRVLTVMAIGAGAM
TVSHANDSFFWVVTQFSRMSVKQAYKAQTMATLIQGVTAMALVYLLSLVLL

Specific function: Probable Permease For An Unknown Substrate. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=452, Percent_Identity=33.6283185840708, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1789097, Length=463, Percent_Identity=31.1015118790497, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1790716, Length=445, Percent_Identity=28.314606741573, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI48994935, Length=456, Percent_Identity=26.7543859649123, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI48994939, Length=467, Percent_Identity=28.2655246252677, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI2367370, Length=457, Percent_Identity=29.3216630196937, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1790776, Length=453, Percent_Identity=25.1655629139073, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46788; Mature: 46657

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SLVLILLAVIAFIVIATAKFKLHPFLTLILASFLAAFAYGLPSADIAKTITSGFGGILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]