Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is glxK [H]

Identifier: 157962535

GI number: 157962535

Start: 3317068

End: 3318222

Strand: Direct

Name: glxK [H]

Synonym: Spea_2714

Alternate gene names: 157962535

Gene position: 3317068-3318222 (Clockwise)

Preceding gene: 157962534

Following gene: 157962536

Centisome position: 64.1

GC content: 50.22

Gene sequence:

>1155_bases
ATGAAAATTGTGATAGCCCCAGACTCTTTCAAAGAAAGCCTAAGCGCAATGGAAGTGGCTAACGAGATTGAACGTGGATT
TCGCAGCGTACTGCCCAGCGCTGAATATATCAAAGTACCTGTTGCCGATGGCGGCGAAGGCACTGTGCAGTCAATGGTTG
ATGCCACAGACGGCACCATCATCACCCTCGATGTCACGGGCCCGTTAGGCGATAAAGTTGAAGCCTTTTATGGCATTTTA
GGCGCAGGCTTTAAGGGAAAGAAAAAAACCGCCGTGATCGAAATGGCAGCAGCATCGGGGCTACATTTAGTTACTGAAGA
CAAGCGAAATCCACTTATTACTACCAGTTACGGCACAGGTGAGTTGATTGTCGATGCCCTCAATCGCGGTATTAAACATA
TCATCATCGGCCTTGGCGGCAGCGCCACTAATGATGGTGGTGCAGGTATGGCGCAGGCCATAGGTGCCCATCTGCTCAAT
AGCGCTGGCAAGGCACTCTCTCCTGGAGGAGTTGCTTTGGCGGAACTAGCCAGTATTGATTTAACTGACTTACACCCGCT
TATTACAAAGTGTACTTTTGAAGTGGCCTGTGATGTGAATAATCCACTTTGTGGAGAAAAAGGTGCCTCGGCTATTTTTG
GTCCACAAAAAGGCGCGACTCCAGAAATGGTGCTGCAGCTCGATACTGCTCTAGGCCATTACGCAGATATCATTGAACGC
TCAGGCATAGCAGATAATCGTAACACTCCCGGCGCAGGGGCTGCTGGCGGTATGGGTTTAGGCGTGATGAGCTTTTTAAA
TGCCGAGCTAAAACCTGGCATAGATATCGTAATGCAAACCGTTAACTTGGCAGGTTTAAGTCAAGGCGCCGACCTCGTAA
TTACTGGTGAAGGCCGCCTCGACAGCCAGACTCTGCATGGTAAAACGCCTATGGGCGTCGCCGGTGTCGCTAAAGCCCAA
GGGATAAAAGTGATTGCCATCGCTGGCTGCGTGAGCGATGACGCCAACATCTTACTGGAACATGGCATTGACGCGCTGTT
CTCTATAACGCCAAGAGCTCTGCCCCTTGCCGAGGTCCTTAGCAGCGCTAAACATAACCTGTACAGCACGGCTAAAAACA
TCGCTGCACTGTACGCGTTATCGGCAGCTAAATAA

Upstream 100 bases:

>100_bases
TGTAATCAACGAAAATACTTGGTTACGCGTCAAAATGACCCCATACATATTAAGATTAGTCTGATTCAACTCGTTGAATT
TAGTCTTATAGGAATACTGC

Downstream 100 bases:

>100_bases
CCAGCGCATAACCACTAATGCTACTCACTTAAGCAAATGACTTAAACAAGTGACTCAGAGTTTGATAACTTCGAAAGATA
AGACTGGACCACAGAGGACA

Product: glycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL
GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN
SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER
SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ
GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK

Sequences:

>Translated_384_residues
MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL
GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN
SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER
SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ
GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK
>Mature_384_residues
MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTIITLDVTGPLGDKVEAFYGIL
GAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTGELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLN
SAGKALSPGGVALAELASIDLTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER
SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRLDSQTLHGKTPMGVAGVAKAQ
GIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVLSSAKHNLYSTAKNIAALYALSAAK

Specific function: Glyoxylate catabolism. [C]

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=57.1808510638298, Blast_Score=398, Evalue=1e-112,
Organism=Escherichia coli, GI145693185, Length=380, Percent_Identity=55.5263157894737, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 39162; Mature: 39162

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEE
ITLDVTGPLGDKVEAFYGILGAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTG
EEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCH
ELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLNSAGKALSPGGVALAELASID
HHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
LTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH
SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DSQTLHGKTPMGVAGVAKAQGIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVL
CCCEECCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCHHHHHCCCCCCCHHHHH
SSAKHNLYSTAKNIAALYALSAAK
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVIAPDSFKESLSAMEVANEIERGFRSVLPSAEYIKVPVADGGEGTVQSMVDATDGTI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEE
ITLDVTGPLGDKVEAFYGILGAGFKGKKKTAVIEMAAASGLHLVTEDKRNPLITTSYGTG
EEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEECCCCH
ELIVDALNRGIKHIIIGLGGSATNDGGAGMAQAIGAHLLNSAGKALSPGGVALAELASID
HHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
LTDLHPLITKCTFEVACDVNNPLCGEKGASAIFGPQKGATPEMVLQLDTALGHYADIIER
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH
SGIADNRNTPGAGAAGGMGLGVMSFLNAELKPGIDIVMQTVNLAGLSQGADLVITGEGRL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DSQTLHGKTPMGVAGVAKAQGIKVIAIAGCVSDDANILLEHGIDALFSITPRALPLAEVL
CCCEECCCCCCCHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCHHHHHCCCCCCCHHHHH
SSAKHNLYSTAKNIAALYALSAAK
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 3020045 [H]