| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962522
Identifier: 157962522
GI number: 157962522
Start: 3300658
End: 3301236
Strand: Direct
Name: 157962522
Synonym: Spea_2701
Alternate gene names: NA
Gene position: 3300658-3301236 (Clockwise)
Preceding gene: 157962521
Following gene: 157962523
Centisome position: 63.79
GC content: 44.56
Gene sequence:
>579_bases ATGACTCGTTCAACCACTGCTTATAAATCGTTATTAGTGTCAGCTTTAATCGCGCCGTTACCGGCTTTTGCTATGGCTTC TGACACCACCAATGTGTTACTGCTCGCTATAACCTTAGGTGGATTTAGTTTATTCAACTTGCTGCTTAATGGACTGTTTT TCTTCACCGGTAAGTATCACAGCCGAAACTTTGCCAAGATGCATTCTCTTATCGCGGTTATTCCGGCTATTATTGCGCTA TTTATTGCACTGATTTACTTTGATACTGCGGGCGCTATTTCAATGAATATTGGCGTCATTATTGTCAGCATTGGTCTTAG CCTACTGCCGCTACAGTTAACGCTATCAGCGACGAAAGCCCCGGGGAAACACACGGCGCTGATTATCGCCCTTACCGCCA TTTTGCTATTAATTGCAGCCTATTACGTCGCGCCTATCGCTATCTTTGCCATTGCTTGCGCCCATGTAGCGCTCGTCAGT CAGGCCGATATCAAGGTTAAATTCTTAAGCATCACGACCCTTGTAACTGCTTATGGCTACATAGGTTATTGGGCATACCA AATTCTGCAATACAGCTAA
Upstream 100 bases:
>100_bases TAAAAAAGTCCTAAAAATAACGCTCAAACCTGTGATGTTCTTGAACTTAATCCTGCTTTAGGAGATCTTAATATCAATCA TCTTCAGTTTAAGAACTTAC
Downstream 100 bases:
>100_bases CGCAATCGCGAGCAGACTGCCTATGCCCAGTGAAATTAAATTAGTTCAACTCCAAGCAGAGATTGCTCAATGCCAAATCT GCTCGGAGTTTCTGCCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTRSTTAYKSLLVSALIAPLPAFAMASDTTNVLLLAITLGGFSLFNLLLNGLFFFTGKYHSRNFAKMHSLIAVIPAIIAL FIALIYFDTAGAISMNIGVIIVSIGLSLLPLQLTLSATKAPGKHTALIIALTAILLLIAAYYVAPIAIFAIACAHVALVS QADIKVKFLSITTLVTAYGYIGYWAYQILQYS
Sequences:
>Translated_192_residues MTRSTTAYKSLLVSALIAPLPAFAMASDTTNVLLLAITLGGFSLFNLLLNGLFFFTGKYHSRNFAKMHSLIAVIPAIIAL FIALIYFDTAGAISMNIGVIIVSIGLSLLPLQLTLSATKAPGKHTALIIALTAILLLIAAYYVAPIAIFAIACAHVALVS QADIKVKFLSITTLVTAYGYIGYWAYQILQYS >Mature_191_residues TRSTTAYKSLLVSALIAPLPAFAMASDTTNVLLLAITLGGFSLFNLLLNGLFFFTGKYHSRNFAKMHSLIAVIPAIIALF IALIYFDTAGAISMNIGVIIVSIGLSLLPLQLTLSATKAPGKHTALIIALTAILLLIAAYYVAPIAIFAIACAHVALVSQ ADIKVKFLSITTLVTAYGYIGYWAYQILQYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20506; Mature: 20375
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSTTAYKSLLVSALIAPLPAFAMASDTTNVLLLAITLGGFSLFNLLLNGLFFFTGKYH CCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCC SRNFAKMHSLIAVIPAIIALFIALIYFDTAGAISMNIGVIIVSIGLSLLPLQLTLSATKA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEEECCCC PGKHTALIIALTAILLLIAAYYVAPIAIFAIACAHVALVSQADIKVKFLSITTLVTAYGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH IGYWAYQILQYS HHHHHHHHHHCC >Mature Secondary Structure TRSTTAYKSLLVSALIAPLPAFAMASDTTNVLLLAITLGGFSLFNLLLNGLFFFTGKYH CCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCC SRNFAKMHSLIAVIPAIIALFIALIYFDTAGAISMNIGVIIVSIGLSLLPLQLTLSATKA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEEECCCC PGKHTALIIALTAILLLIAAYYVAPIAIFAIACAHVALVSQADIKVKFLSITTLVTAYGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH IGYWAYQILQYS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA