| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962521
Identifier: 157962521
GI number: 157962521
Start: 3297697
End: 3299796
Strand: Direct
Name: 157962521
Synonym: Spea_2700
Alternate gene names: NA
Gene position: 3297697-3299796 (Clockwise)
Preceding gene: 157962520
Following gene: 157962522
Centisome position: 63.73
GC content: 46.0
Gene sequence:
>2100_bases ATGAAATTCAAACTAAATTTGGTCACGCTCGCTTTGCTAACTAACGCCGGAATGTTATCTGGCGCGGCTATCGCTGCTGA CGGTTACGGTATTCAAAATGCGAATACTGAAAAAGTAAAATTCGAAAAGTGGGTTTGTAAGAACTGTAAAGTCGAAAAAG GCGTATCAGGCACAGTAGGTATTGGTGCAGGTTATAGCGACAGCGATGATATTCGCTCGGCTAATGCGTTTGCCACCGAA GATGGCTTTGCCGGTAAAGTTGACGCCGATGTAAAATACACTGGCGAACATGGCTACCAAGCGACTATCGAAGCTGACAA TCTAGGCATGGAAAACAGCCGCGCCGAGATCAACGCAGGTAAAGCTGGCCAATACAACTTGAACCTAAACTACCGTCAAA TCGCTACTTACAAGACCGATAAAGCGATGAGCCCTTATCAAGGTATTGGTGGCGATGACCTTACCCTACCGGGTGACTGG GTTCATGGCGGCAGCACGCAAGACATGACCAACTTGTACTCAAGTCTGAATCCACTTGAGCTTTCGCTTAAGCGTAAACG CGCAGGCTTAGGTTTCGAGTACCAAGGTGAGACACTGTGGAGCACTTACGTTAATTATCAACGTGAAGACAAAACAGGTC TTAAACAAGCATCGGGCAGCTTCTACAATCAGTCAATGATGCTTGCTGAACCTGTTGATTACACCACTGATACCGTTGAA GCGGGCGTTCGCTTTGCTGGTGACAACTGGTATACGGCAGTGAACTATAACGGCTCAATCTTTAAGAATGAGTACAGCGA ACTGTCTTATGATAATGCGTTCAGCCCAACCTTTGGTGCACAAACCACAGGTTATATGTCACTGGATCCTGATAACGAAG CGCATACCGTTTCGGTTCTTGGCCAGTATGTAGTTGGTCGCACTATCATGAATGGTCGAGTCTATTTCGGTCAGATGACC CAAGATCAAGACTTCAGCACATCGGGTTATGGCTATCAAATGCCAACTGAGTCGCTAGATGGTCGAGTCGATACTCAAGG TGCAACCCTTAAGGTTGTGTCTCGTATCAATCGTCAGCTACGTTTAAACGCAAGCTATGATTATAGCGACCGTGATAACA AGACCAATGTTGAAGAGTGGACACAGATCAGCATCGACTCAACAACGGGTCAAGCGGCTTACAACACACCATACGACATC ACCACTCATAGAGCTAAACTTGGTGCAGACTACCGTCTAGCGCGCGGTCATAAGCTTGAAGGTGGTTATGACTACCGTAA GGATGAGCGTAGCTATTCAGACCGTGAAACCACTGACGAAAGCACCTTATGGGCTAAGTACCAGCTAAGTGCTTTTGCTA ACTGGAACATGTGGATCAAAGGTAGTTACGGTCAACGTGACGGTTCTACTTACCAAGCGTCTGAGTGGACATCGAGTGAG CAAAACGATCTGCTTCGCAAGTACAACCTTGCTGACAGACAGCGTACTCAAATTGAAGCTCGTGTAACTCACAGCCCAAT CGATAGCTTAACGTTAGATTTTGGTGCTCGTTACGCACTTGATGACTATAACGAAACACAAATCGGCTTAACTGAATCGA AAGATATGAGTTATGACGCGAGTGTGAGTTACCTCATCAATGATGACGTGACAGTAACGGCATTTTACAACCGTCAGAAC ATAGATTCAGAGCAAGCAGGTAGCAGCAACTTTGGTGCACCAAACTGGTATGGCAGCGTTGAAGATCAAGTCGATGTTCT CGGTGCAGGCTTTAGCTACAACAACCTAATGGAGCAAAAGCTTCGCTTAGGTGTTGATTACACTTACTCAGACTCGAACA GTAACACCCAAGTCACTCAGGGCATTACTGGCGACTACGGTGATTACTACGCTAAAGTGCATAACGTTAATGTTTACGCC TTATACAAAGCCACAGAGAAGATGGATCTGCGCCTAGACTATAAGATGGAAAACTACAAAGACAACGATGCAGCAAATGA CATCGCGCCTGATAGTATCTCGAATGTGTTGAGTTTTGGCAGCAACAGCCACGACTATAATGCCCATTTGATCATGCTTA GCGTGAGCTACCGTTTGTAG
Upstream 100 bases:
>100_bases TGCCATGACTGGCGGCCGTAGCTGTTTGAACTGTCACAACCAGATCCATGGTTCTAACCATCCATCTGGCAAGCTACTTC AGCGCTAAGGAGACGAGAAG
Downstream 100 bases:
>100_bases AACATAGTTTTAGTTAAAACAAAAAACCCGCTTCATGCGGGTTTTTTATTGCCTATAATCGCCGTGGTGCATCGTTTTGG CTTTTATTAAAGAGCGTATC
Product: outer membrane protein MtrB
Products: NA
Alternate protein names: Outer Membrane Protein MtrB; Outer Membrane Protein MtrB
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MKFKLNLVTLALLTNAGMLSGAAIAADGYGIQNANTEKVKFEKWVCKNCKVEKGVSGTVGIGAGYSDSDDIRSANAFATE DGFAGKVDADVKYTGEHGYQATIEADNLGMENSRAEINAGKAGQYNLNLNYRQIATYKTDKAMSPYQGIGGDDLTLPGDW VHGGSTQDMTNLYSSLNPLELSLKRKRAGLGFEYQGETLWSTYVNYQREDKTGLKQASGSFYNQSMMLAEPVDYTTDTVE AGVRFAGDNWYTAVNYNGSIFKNEYSELSYDNAFSPTFGAQTTGYMSLDPDNEAHTVSVLGQYVVGRTIMNGRVYFGQMT QDQDFSTSGYGYQMPTESLDGRVDTQGATLKVVSRINRQLRLNASYDYSDRDNKTNVEEWTQISIDSTTGQAAYNTPYDI TTHRAKLGADYRLARGHKLEGGYDYRKDERSYSDRETTDESTLWAKYQLSAFANWNMWIKGSYGQRDGSTYQASEWTSSE QNDLLRKYNLADRQRTQIEARVTHSPIDSLTLDFGARYALDDYNETQIGLTESKDMSYDASVSYLINDDVTVTAFYNRQN IDSEQAGSSNFGAPNWYGSVEDQVDVLGAGFSYNNLMEQKLRLGVDYTYSDSNSNTQVTQGITGDYGDYYAKVHNVNVYA LYKATEKMDLRLDYKMENYKDNDAANDIAPDSISNVLSFGSNSHDYNAHLIMLSVSYRL
Sequences:
>Translated_699_residues MKFKLNLVTLALLTNAGMLSGAAIAADGYGIQNANTEKVKFEKWVCKNCKVEKGVSGTVGIGAGYSDSDDIRSANAFATE DGFAGKVDADVKYTGEHGYQATIEADNLGMENSRAEINAGKAGQYNLNLNYRQIATYKTDKAMSPYQGIGGDDLTLPGDW VHGGSTQDMTNLYSSLNPLELSLKRKRAGLGFEYQGETLWSTYVNYQREDKTGLKQASGSFYNQSMMLAEPVDYTTDTVE AGVRFAGDNWYTAVNYNGSIFKNEYSELSYDNAFSPTFGAQTTGYMSLDPDNEAHTVSVLGQYVVGRTIMNGRVYFGQMT QDQDFSTSGYGYQMPTESLDGRVDTQGATLKVVSRINRQLRLNASYDYSDRDNKTNVEEWTQISIDSTTGQAAYNTPYDI TTHRAKLGADYRLARGHKLEGGYDYRKDERSYSDRETTDESTLWAKYQLSAFANWNMWIKGSYGQRDGSTYQASEWTSSE QNDLLRKYNLADRQRTQIEARVTHSPIDSLTLDFGARYALDDYNETQIGLTESKDMSYDASVSYLINDDVTVTAFYNRQN IDSEQAGSSNFGAPNWYGSVEDQVDVLGAGFSYNNLMEQKLRLGVDYTYSDSNSNTQVTQGITGDYGDYYAKVHNVNVYA LYKATEKMDLRLDYKMENYKDNDAANDIAPDSISNVLSFGSNSHDYNAHLIMLSVSYRL >Mature_699_residues MKFKLNLVTLALLTNAGMLSGAAIAADGYGIQNANTEKVKFEKWVCKNCKVEKGVSGTVGIGAGYSDSDDIRSANAFATE DGFAGKVDADVKYTGEHGYQATIEADNLGMENSRAEINAGKAGQYNLNLNYRQIATYKTDKAMSPYQGIGGDDLTLPGDW VHGGSTQDMTNLYSSLNPLELSLKRKRAGLGFEYQGETLWSTYVNYQREDKTGLKQASGSFYNQSMMLAEPVDYTTDTVE AGVRFAGDNWYTAVNYNGSIFKNEYSELSYDNAFSPTFGAQTTGYMSLDPDNEAHTVSVLGQYVVGRTIMNGRVYFGQMT QDQDFSTSGYGYQMPTESLDGRVDTQGATLKVVSRINRQLRLNASYDYSDRDNKTNVEEWTQISIDSTTGQAAYNTPYDI TTHRAKLGADYRLARGHKLEGGYDYRKDERSYSDRETTDESTLWAKYQLSAFANWNMWIKGSYGQRDGSTYQASEWTSSE QNDLLRKYNLADRQRTQIEARVTHSPIDSLTLDFGARYALDDYNETQIGLTESKDMSYDASVSYLINDDVTVTAFYNRQN IDSEQAGSSNFGAPNWYGSVEDQVDVLGAGFSYNNLMEQKLRLGVDYTYSDSNSNTQVTQGITGDYGDYYAKVHNVNVYA LYKATEKMDLRLDYKMENYKDNDAANDIAPDSISNVLSFGSNSHDYNAHLIMLSVSYRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78001; Mature: 78001
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLNLVTLALLTNAGMLSGAAIAADGYGIQNANTEKVKFEKWVCKNCKVEKGVSGTVG CEEEEEEEEEEEHHCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCEEE IGAGYSDSDDIRSANAFATEDGFAGKVDADVKYTGEHGYQATIEADNLGMENSRAEINAG ECCCCCCCHHCCCCCCEECCCCCCCEECCCEEECCCCCEEEEEECCCCCCCCCCCEECCC KAGQYNLNLNYRQIATYKTDKAMSPYQGIGGDDLTLPGDWVHGGSTQDMTNLYSSLNPLE CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE LSLKRKRAGLGFEYQGETLWSTYVNYQREDKTGLKQASGSFYNQSMMLAEPVDYTTDTVE EEEHHHHCCCCEEECCCEEEEHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHH AGVRFAGDNWYTAVNYNGSIFKNEYSELSYDNAFSPTFGAQTTGYMSLDPDNEAHTVSVL CCEEEECCCEEEEEECCCCEECCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH GQYVVGRTIMNGRVYFGQMTQDQDFSTSGYGYQMPTESLDGRVDTQGATLKVVSRINRQL HHHHHCEEEECCEEEEEECCCCCCCCCCCCCEECCHHHCCCEECCCCCHHHHHHHHCCEE RLNASYDYSDRDNKTNVEEWTQISIDSTTGQAAYNTPYDITTHRAKLGADYRLARGHKLE EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECHHHCCCCEEECCCCCCC GGYDYRKDERSYSDRETTDESTLWAKYQLSAFANWNMWIKGSYGQRDGSTYQASEWTSSE CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCH QNDLLRKYNLADRQRTQIEARVTHSPIDSLTLDFGARYALDDYNETQIGLTESKDMSYDA HHHHHHHHCCCCCHHHEEEEEEECCCCCCEEECCCCEEEECCCCCCEEEEECCCCCCCCC SVSYLINDDVTVTAFYNRQNIDSEQAGSSNFGAPNWYGSVEDQVDVLGAGFSYNNLMEQK EEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH LRLGVDYTYSDSNSNTQVTQGITGDYGDYYAKVHNVNVYALYKATEKMDLRLDYKMENYK HHHCCEEEECCCCCCCEEECCCCCCCCCEEEEEECEEEEEEEEECCCEEEEEEEEECCCC DNDAANDIAPDSISNVLSFGSNSHDYNAHLIMLSVSYRL CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKFKLNLVTLALLTNAGMLSGAAIAADGYGIQNANTEKVKFEKWVCKNCKVEKGVSGTVG CEEEEEEEEEEEHHCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCEEE IGAGYSDSDDIRSANAFATEDGFAGKVDADVKYTGEHGYQATIEADNLGMENSRAEINAG ECCCCCCCHHCCCCCCEECCCCCCCEECCCEEECCCCCEEEEEECCCCCCCCCCCEECCC KAGQYNLNLNYRQIATYKTDKAMSPYQGIGGDDLTLPGDWVHGGSTQDMTNLYSSLNPLE CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE LSLKRKRAGLGFEYQGETLWSTYVNYQREDKTGLKQASGSFYNQSMMLAEPVDYTTDTVE EEEHHHHCCCCEEECCCEEEEHHHCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHH AGVRFAGDNWYTAVNYNGSIFKNEYSELSYDNAFSPTFGAQTTGYMSLDPDNEAHTVSVL CCEEEECCCEEEEEECCCCEECCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH GQYVVGRTIMNGRVYFGQMTQDQDFSTSGYGYQMPTESLDGRVDTQGATLKVVSRINRQL HHHHHCEEEECCEEEEEECCCCCCCCCCCCCEECCHHHCCCEECCCCCHHHHHHHHCCEE RLNASYDYSDRDNKTNVEEWTQISIDSTTGQAAYNTPYDITTHRAKLGADYRLARGHKLE EEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECHHHCCCCEEECCCCCCC GGYDYRKDERSYSDRETTDESTLWAKYQLSAFANWNMWIKGSYGQRDGSTYQASEWTSSE CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCH QNDLLRKYNLADRQRTQIEARVTHSPIDSLTLDFGARYALDDYNETQIGLTESKDMSYDA HHHHHHHHCCCCCHHHEEEEEEECCCCCCEEECCCCEEEECCCCCCEEEEECCCCCCCCC SVSYLINDDVTVTAFYNRQNIDSEQAGSSNFGAPNWYGSVEDQVDVLGAGFSYNNLMEQK EEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH LRLGVDYTYSDSNSNTQVTQGITGDYGDYYAKVHNVNVYALYKATEKMDLRLDYKMENYK HHHCCEEEECCCCCCCEEECCCCCCCCCEEEEEECEEEEEEEEECCCEEEEEEEEECCCC DNDAANDIAPDSISNVLSFGSNSHDYNAHLIMLSVSYRL CCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA