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The map label for this gene is yccT [C]

Identifier: 157962480

GI number: 157962480

Start: 3240869

End: 3241579

Strand: Direct

Name: yccT [C]

Synonym: Spea_2659

Alternate gene names: 157962480

Gene position: 3240869-3241579 (Clockwise)

Preceding gene: 157962479

Following gene: 157962481

Centisome position: 62.63

GC content: 45.85

Gene sequence:

>711_bases
ATGAAACCACGTTTAACCATTACCGCACTTCTTGCTCTATGTGGTTCTTCAGCAGCCTTTGCCGCTGACTTCAACATCCC
AATGGCTTTCGAATACATCGCAGTTGATGGTCAAGAGATAAAGACTAGCCTTTTCAATCATAAATCTGAGATTGAGCTTG
ATAAAGGCACTCATAAAATCGCCATCCGTTATAACGATCTTGTTGCAGATGACTTTAGCGACAGTGAAACAAATATCAAG
TCGAATGCTTTCGTGGTGACAATTGATGTCGATGGTGATTATAGCTACCAGCTAAAACCCGCCGATGGTGAGTTTGTTAA
AAACCCAAAAAGCTTTGCTAAGGCGCCGCAAGTCGTCATAACTCGTGAAGACAAAGGCAATGTTAGCTATAAAGTCACCC
AGACGAACATTGGCGAAGAGTCATTCGTTTCTCGCTTATTCAGTGGCAATAATCCAACTGACGTTGATGCAGAATCTGCT
GCAGTCACAAGTTCTGCTGCGACAGTAGCATCGATTCCAACGGCTCCTGTTAGCAAGCCATCACCCGCTGCCACAGCGAC
CATGCCAGCAGTTGCAGCAACAAGCCCAACGCCTCCAGTGACTTCTGCAGAAGAAGCTGCCAAAGCCGAGCAGATGCTAC
AATATTGGTGGTTGCAAGCCGACGAGCAAACGCGTAAAGAATTCATGAGCTGGGCAATTAAGCAGCTTTAA

Upstream 100 bases:

>100_bases
TAGTCGACTAGGAAAGTGTCGGCAAGCTACCAGCTATATTGAAGATCGCATCCAACTATTCGAACGACCTTTTAAGAGTC
AAAATCGTTAAGGAACAAAA

Downstream 100 bases:

>100_bases
GTTAGCAGCAGTTCTTACTCAAGATTGTGTATGGTCCCTCTAATCTATGACGCCAGCTACTCCAAGCTGGCGTTACCTCC
TCTTCATCGCTTTCCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKPRLTITALLALCGSSAAFAADFNIPMAFEYIAVDGQEIKTSLFNHKSEIELDKGTHKIAIRYNDLVADDFSDSETNIK
SNAFVVTIDVDGDYSYQLKPADGEFVKNPKSFAKAPQVVITREDKGNVSYKVTQTNIGEESFVSRLFSGNNPTDVDAESA
AVTSSAATVASIPTAPVSKPSPAATATMPAVAATSPTPPVTSAEEAAKAEQMLQYWWLQADEQTRKEFMSWAIKQL

Sequences:

>Translated_236_residues
MKPRLTITALLALCGSSAAFAADFNIPMAFEYIAVDGQEIKTSLFNHKSEIELDKGTHKIAIRYNDLVADDFSDSETNIK
SNAFVVTIDVDGDYSYQLKPADGEFVKNPKSFAKAPQVVITREDKGNVSYKVTQTNIGEESFVSRLFSGNNPTDVDAESA
AVTSSAATVASIPTAPVSKPSPAATATMPAVAATSPTPPVTSAEEAAKAEQMLQYWWLQADEQTRKEFMSWAIKQL
>Mature_236_residues
MKPRLTITALLALCGSSAAFAADFNIPMAFEYIAVDGQEIKTSLFNHKSEIELDKGTHKIAIRYNDLVADDFSDSETNIK
SNAFVVTIDVDGDYSYQLKPADGEFVKNPKSFAKAPQVVITREDKGNVSYKVTQTNIGEESFVSRLFSGNNPTDVDAESA
AVTSSAATVASIPTAPVSKPSPAATATMPAVAATSPTPPVTSAEEAAKAEQMLQYWWLQADEQTRKEFMSWAIKQL

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=232, Percent_Identity=25, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 25510; Mature: 25510

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRLTITALLALCGSSAAFAADFNIPMAFEYIAVDGQEIKTSLFNHKSEIELDKGTHKI
CCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCEEECCCCEEE
AIRYNDLVADDFSDSETNIKSNAFVVTIDVDGDYSYQLKPADGEFVKNPKSFAKAPQVVI
EEEECCEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHCCCHHHHCCCEEEE
TREDKGNVSYKVTQTNIGEESFVSRLFSGNNPTDVDAESAAVTSSAATVASIPTAPVSKP
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHEEECCCCCCCCC
SPAATATMPAVAATSPTPPVTSAEEAAKAEQMLQYWWLQADEQTRKEFMSWAIKQL
CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPRLTITALLALCGSSAAFAADFNIPMAFEYIAVDGQEIKTSLFNHKSEIELDKGTHKI
CCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCEEECCCCEEE
AIRYNDLVADDFSDSETNIKSNAFVVTIDVDGDYSYQLKPADGEFVKNPKSFAKAPQVVI
EEEECCEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHCCCHHHHCCCEEEE
TREDKGNVSYKVTQTNIGEESFVSRLFSGNNPTDVDAESAAVTSSAATVASIPTAPVSKP
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHEEECCCCCCCCC
SPAATATMPAVAATSPTPPVTSAEEAAKAEQMLQYWWLQADEQTRKEFMSWAIKQL
CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]