Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962479

Identifier: 157962479

GI number: 157962479

Start: 3240197

End: 3240859

Strand: Direct

Name: 157962479

Synonym: Spea_2658

Alternate gene names: NA

Gene position: 3240197-3240859 (Clockwise)

Preceding gene: 157962478

Following gene: 157962480

Centisome position: 62.62

GC content: 40.27

Gene sequence:

>663_bases
ATGACAACCAACGAATTAGTTCAAAAGCTCAAGTTACAACTTAAGCAATTAGAGCAAGAGGTATTACAGCACGATTCTCG
CTTGCCACCGGGACAACGCAAGATGATGCTGGATGTCGAACGTTTCAATAATGAGCTATTTATTCAGGTTGGCGGCCAGC
TCCAGCCGTGTATCGATCAACTATCTAAAAATATTGCCCAACTTGAGCAACTACTCAGGGCAAAGCGATCGCCTTACACC
ATAGTGTCGAGCTGCGAGAAAATACAAGATAGATTCAGCGCACTCAAGCGTGCCCTAGCAACCACAAGTATTAATGTTAA
ATCAATTGAACAGCAAAAACGTAGCCGCAGAGCTTATGCAATTAAGCGAGGAATTAAGTCTCATAATGAAAGTGGTTTTA
ATTGGATCGCCTCAAATGTGATGCAAAATAGCCATCAACTCTATGAAGAACTTAACAAACATTTGAACTGGGCTAAGATT
ATTGAACAAAAAATTGAAAATTTGCAATCTTCACTTGAAAACTGTCATAGTGCTGACAAAATCAAGCTGCAGAATGAGAT
CCTTACTCTGCATAGTCGACTAGGAAAGTGTCGGCAAGCTACCAGCTATATTGAAGATCGCATCCAACTATTCGAACGAC
CTTTTAAGAGTCAAAATCGTTAA

Upstream 100 bases:

>100_bases
GTGCACATTCGGCTATTAAGTTTGGCCTACCCTTTATTCGTCCGATTTTCATTACCGTTATACTATTAATAGCAGCGCAG
TTAGTTTGGAGTGCTTGGTT

Downstream 100 bases:

>100_bases
GGAACAAAAATGAAACCACGTTTAACCATTACCGCACTTCTTGCTCTATGTGGTTCTTCAGCAGCCTTTGCCGCTGACTT
CAACATCCCAATGGCTTTCG

Product: primosomal replication protein N''

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTTNELVQKLKLQLKQLEQEVLQHDSRLPPGQRKMMLDVERFNNELFIQVGGQLQPCIDQLSKNIAQLEQLLRAKRSPYT
IVSSCEKIQDRFSALKRALATTSINVKSIEQQKRSRRAYAIKRGIKSHNESGFNWIASNVMQNSHQLYEELNKHLNWAKI
IEQKIENLQSSLENCHSADKIKLQNEILTLHSRLGKCRQATSYIEDRIQLFERPFKSQNR

Sequences:

>Translated_220_residues
MTTNELVQKLKLQLKQLEQEVLQHDSRLPPGQRKMMLDVERFNNELFIQVGGQLQPCIDQLSKNIAQLEQLLRAKRSPYT
IVSSCEKIQDRFSALKRALATTSINVKSIEQQKRSRRAYAIKRGIKSHNESGFNWIASNVMQNSHQLYEELNKHLNWAKI
IEQKIENLQSSLENCHSADKIKLQNEILTLHSRLGKCRQATSYIEDRIQLFERPFKSQNR
>Mature_219_residues
TTNELVQKLKLQLKQLEQEVLQHDSRLPPGQRKMMLDVERFNNELFIQVGGQLQPCIDQLSKNIAQLEQLLRAKRSPYTI
VSSCEKIQDRFSALKRALATTSINVKSIEQQKRSRRAYAIKRGIKSHNESGFNWIASNVMQNSHQLYEELNKHLNWAKII
EQKIENLQSSLENCHSADKIKLQNEILTLHSRLGKCRQATSYIEDRIQLFERPFKSQNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25697; Mature: 25566

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNELVQKLKLQLKQLEQEVLQHDSRLPPGQRKMMLDVERFNNELFIQVGGQLQPCIDQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSKNIAQLEQLLRAKRSPYTIVSSCEKIQDRFSALKRALATTSINVKSIEQQKRSRRAYA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IKRGIKSHNESGFNWIASNVMQNSHQLYEELNKHLNWAKIIEQKIENLQSSLENCHSADK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
IKLQNEILTLHSRLGKCRQATSYIEDRIQLFERPFKSQNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTNELVQKLKLQLKQLEQEVLQHDSRLPPGQRKMMLDVERFNNELFIQVGGQLQPCIDQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSKNIAQLEQLLRAKRSPYTIVSSCEKIQDRFSALKRALATTSINVKSIEQQKRSRRAYA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IKRGIKSHNESGFNWIASNVMQNSHQLYEELNKHLNWAKIIEQKIENLQSSLENCHSADK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHH
IKLQNEILTLHSRLGKCRQATSYIEDRIQLFERPFKSQNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA