Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962452
Identifier: 157962452
GI number: 157962452
Start: 3201528
End: 3202364
Strand: Reverse
Name: 157962452
Synonym: Spea_2631
Alternate gene names: NA
Gene position: 3202364-3201528 (Counterclockwise)
Preceding gene: 157962453
Following gene: 157962450
Centisome position: 61.89
GC content: 47.91
Gene sequence:
>837_bases TTGCCCGTTGAGTATTTTATGGTGACGTTCACTTTACCGTTCGAGCTTCGTGCCGTCGCGAAGTCTCACCCAGAGCAAGT CTATCAAGCGATGTTCACGGTGGCGGCCAGTGTACTTAAAGACTTTGCACACAACTCAAAATCGCTCGGCGGAAAAATTG GCTTTACTGGCGTGTTGCACACCCACAATAGACGCCGAGACTACCATCCGCATCTTCACTTCATCATTCCCGCTGGAAGC TTCAACAAAGACAAAAAGCAGTGGCAAAAAAGCAGAGGTAAATATCTGTTCAACGCCTTTAATCTCGCCACAGTGTGGCG AGCAAGGTTGCTGGAATACCTGACAAATAAGCTAGATATCACACTGCCAGCAGCTACCCCAAAGAAGTGGGTGGTAGATT GCCAGCATGTTGGCAAAGGCTTACCTGCACTGAAGTACTTATCAAGATACCTCTATCGCGGTGTATTGCCTGATAAAAAT ATCATCAGTAATATCGATGGGCACGTCAGCTTCGAGTATCTAGACAGCCAAACTCAGACCAATAAAGTGCGTACCTTACC CGAGATAGAGTTCCTATGGTTAGTGCTGCAGCATGTTTTGCCCAAAGGGTTACGCCCAGTACGAGATTATGGATTACTTG GCGGGAACTTCTGCAAACTGAGGCAACAAATACAGTTGATGATCGTTGTCGCAGGGGCGGTATTTCCCCTAGTCGAAGAG GCAAAACGCATTGCAGCAATGCGGCCTTGTCCTTGCTGCCAGCAGCCGATGACATTTATGGGCGTACATAGAAAAAAGCA GGTGCGACTGACAAGCTTTCATAGCCAGAGCACTTAG
Upstream 100 bases:
>100_bases TCTTTTACTTATCTTTTACTAGTCTTGTGGTCATCGAAGTTGCTCTCAATGCCAGCACAACACCACACAAGACTGGCTCA ATAAGCAGCAGACTAAGTTA
Downstream 100 bases:
>100_bases CAATCTAACGCCACTGTTTAAGCGGTAAGATAGCATAATTTTGAAATTTTAGATCTCTAGAAGTGAAACGCAGGAGGTGA TTAAGCTTTTGAAACTATAG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPVEYFMVTFTLPFELRAVAKSHPEQVYQAMFTVAASVLKDFAHNSKSLGGKIGFTGVLHTHNRRRDYHPHLHFIIPAGS FNKDKKQWQKSRGKYLFNAFNLATVWRARLLEYLTNKLDITLPAATPKKWVVDCQHVGKGLPALKYLSRYLYRGVLPDKN IISNIDGHVSFEYLDSQTQTNKVRTLPEIEFLWLVLQHVLPKGLRPVRDYGLLGGNFCKLRQQIQLMIVVAGAVFPLVEE AKRIAAMRPCPCCQQPMTFMGVHRKKQVRLTSFHSQST
Sequences:
>Translated_278_residues MPVEYFMVTFTLPFELRAVAKSHPEQVYQAMFTVAASVLKDFAHNSKSLGGKIGFTGVLHTHNRRRDYHPHLHFIIPAGS FNKDKKQWQKSRGKYLFNAFNLATVWRARLLEYLTNKLDITLPAATPKKWVVDCQHVGKGLPALKYLSRYLYRGVLPDKN IISNIDGHVSFEYLDSQTQTNKVRTLPEIEFLWLVLQHVLPKGLRPVRDYGLLGGNFCKLRQQIQLMIVVAGAVFPLVEE AKRIAAMRPCPCCQQPMTFMGVHRKKQVRLTSFHSQST >Mature_277_residues PVEYFMVTFTLPFELRAVAKSHPEQVYQAMFTVAASVLKDFAHNSKSLGGKIGFTGVLHTHNRRRDYHPHLHFIIPAGSF NKDKKQWQKSRGKYLFNAFNLATVWRARLLEYLTNKLDITLPAATPKKWVVDCQHVGKGLPALKYLSRYLYRGVLPDKNI ISNIDGHVSFEYLDSQTQTNKVRTLPEIEFLWLVLQHVLPKGLRPVRDYGLLGGNFCKLRQQIQLMIVVAGAVFPLVEEA KRIAAMRPCPCCQQPMTFMGVHRKKQVRLTSFHSQST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 31865; Mature: 31734
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVEYFMVTFTLPFELRAVAKSHPEQVYQAMFTVAASVLKDFAHNSKSLGGKIGFTGVLH CCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEE THNRRRDYHPHLHFIIPAGSFNKDKKQWQKSRGKYLFNAFNLATVWRARLLEYLTNKLDI CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCEE TLPAATPKKWVVDCQHVGKGLPALKYLSRYLYRGVLPDKNIISNIDGHVSFEYLDSQTQT EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHC NKVRTLPEIEFLWLVLQHVLPKGLRPVRDYGLLGGNFCKLRQQIQLMIVVAGAVFPLVEE CHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRIAAMRPCPCCQQPMTFMGVHRKKQVRLTSFHSQST HHHHHHCCCCCCCCCCHHHHHCCCHHHEEEECCCCCCC >Mature Secondary Structure PVEYFMVTFTLPFELRAVAKSHPEQVYQAMFTVAASVLKDFAHNSKSLGGKIGFTGVLH CCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEEE THNRRRDYHPHLHFIIPAGSFNKDKKQWQKSRGKYLFNAFNLATVWRARLLEYLTNKLDI CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCEE TLPAATPKKWVVDCQHVGKGLPALKYLSRYLYRGVLPDKNIISNIDGHVSFEYLDSQTQT EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHC NKVRTLPEIEFLWLVLQHVLPKGLRPVRDYGLLGGNFCKLRQQIQLMIVVAGAVFPLVEE CHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRIAAMRPCPCCQQPMTFMGVHRKKQVRLTSFHSQST HHHHHHCCCCCCCCCCHHHHHCCCHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]