Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is putP [H]
Identifier: 157962429
GI number: 157962429
Start: 3176029
End: 3177480
Strand: Direct
Name: putP [H]
Synonym: Spea_2608
Alternate gene names: 157962429
Gene position: 3176029-3177480 (Clockwise)
Preceding gene: 157962428
Following gene: 157962430
Centisome position: 61.38
GC content: 45.87
Gene sequence:
>1452_bases ATGACAATTGAATTACCTGTTTTAATTACTTTTATCGCCTATCTCTCTTTAATGATGGGCATAGGCTTATGGGCTTATAA AGCAACAGACTCTGTAGACGATTACATTCTAGGTGGCCGTGGTATGGGGCCTGCGGTTACTGCACTCAGTGTGGGTGCCT CAGATATGTCGGGCTGGTTACTTTTAGGTTTACCCGGAGCCGTATACCTAGGCGGGTTAGGCGAAGCTTGGATTGGCATA GGTCTTGTCTTTGGCGCTTGGCTTAACTGGCTATTTGTCGCTAAACGTTTACGTGTTTATACCCAATTTACTGATAATGC ACTGACACTTCCCGACTTCTTCGAGAAACGTTTTGAAGATAATAAAGGCCTGCTAAAGTTAGTTTCAGCTGTGACCATCT TAGTCTTCTTCACCTTTTATGCCTCCTCTGGCATGGTAGGTGGTGCGATTTTATTTGAAAAAGTATTCGGTCTAGATTAC ACCTTGGCTTTGATCATTGGCTCTACCATTATCGTGGCCTATACCTTCGTTGGTGGTTTCTTTGCCGTTAGTTGGACCGA CTTTTTCCAAGGCTGCCTGATGCTTATTGCACTGTTAATTGTCCCTGTGGCTATTTTTAGTCAGCCAGAGACACAAGCAG GCTTGGAAAACATCGACCCAGCAATGCTATCTATGTTCAATGAAAATACCACCTTTATTGGCTTCATATCGCTACTAGCA TGGGGACTAGGCTATTTTGGTCAGCCGCATATTCTGTCTCGCTTTATGGCTATAGCCTCACCTGACGATATTCCGGTTTC ACGCCGCATCGCCATGGGTTGGATGCTACTAGCCCTTGTCGGTGCGCTGGCAACAGGTATTGCCGGTAGCCTCTACTTTG CAGCTGAGCCACTATCAAACCCTGAAACCGTGTTCATTCACTTAGCCCATGCAGCATTTAATCCGTGGATTGGTGGTTTA CTTATCGCAGCTATCTTGTCGGCAATTATGAGTACCATCGATTCGCAGCTTTTAGTCTGTTCGAGTGTGATCACCGAAGA TTTCTATAAGAAGTGGTTACGTCCACAGGCGACAAGTAAAGAATTGATGCTTGTCGGCCGTATTGGTGTATTGGCGATTG CCATCATTGCGGGTGTTGTTGCCCTTAATCCAGAAAGCAGCGTACTAGGTTTAGTCAGCTATGCTTGGGCTGGCTTTGGT GCAGCTTTCGGTCCTGTCGTGTTGTTATCTCTATTTTGGCGTGGTTACAGCCGCAATGGTGCAGTCGCGACCATTATTGT TGGTGCACTGACAGTTGTGGTTTGGAAGCAACTTTCAGGTCATATTTTTGACATCTATGAAATCCTTCCAGGCTTCATTC TAGCCAGCCTAGCCGGTGTGGTTATCAGCAAGATGCAAAGCCCATCAGAGACAATTAAACAGCAGTTCGATAGCTTCGAA GCCAAGCTATAG
Upstream 100 bases:
>100_bases TAGATCTTCATCACATTCCCTCGCTTTATTGGGCCTCAGCTCATAGATCTGCTAGCATAGCGCCCACACAAATTGAAAAT AAAAGAAGCGTGCATCACAC
Downstream 100 bases:
>100_bases CTGCAATAGAGAGCAGAACAGATAAAAAGCGTACACTTGTACGCTTTTTTTATTTTTACCCATCAGCGCCTAAACCATCA ACGACTTACATCCCATTAAC
Product: sodium/proline symporter
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTIELPVLITFIAYLSLMMGIGLWAYKATDSVDDYILGGRGMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGI GLVFGAWLNWLFVAKRLRVYTQFTDNALTLPDFFEKRFEDNKGLLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDY TLALIIGSTIIVAYTFVGGFFAVSWTDFFQGCLMLIALLIVPVAIFSQPETQAGLENIDPAMLSMFNENTTFIGFISLLA WGLGYFGQPHILSRFMAIASPDDIPVSRRIAMGWMLLALVGALATGIAGSLYFAAEPLSNPETVFIHLAHAAFNPWIGGL LIAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPQATSKELMLVGRIGVLAIAIIAGVVALNPESSVLGLVSYAWAGFG AAFGPVVLLSLFWRGYSRNGAVATIIVGALTVVVWKQLSGHIFDIYEILPGFILASLAGVVISKMQSPSETIKQQFDSFE AKL
Sequences:
>Translated_483_residues MTIELPVLITFIAYLSLMMGIGLWAYKATDSVDDYILGGRGMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGI GLVFGAWLNWLFVAKRLRVYTQFTDNALTLPDFFEKRFEDNKGLLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDY TLALIIGSTIIVAYTFVGGFFAVSWTDFFQGCLMLIALLIVPVAIFSQPETQAGLENIDPAMLSMFNENTTFIGFISLLA WGLGYFGQPHILSRFMAIASPDDIPVSRRIAMGWMLLALVGALATGIAGSLYFAAEPLSNPETVFIHLAHAAFNPWIGGL LIAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPQATSKELMLVGRIGVLAIAIIAGVVALNPESSVLGLVSYAWAGFG AAFGPVVLLSLFWRGYSRNGAVATIIVGALTVVVWKQLSGHIFDIYEILPGFILASLAGVVISKMQSPSETIKQQFDSFE AKL >Mature_482_residues TIELPVLITFIAYLSLMMGIGLWAYKATDSVDDYILGGRGMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGIG LVFGAWLNWLFVAKRLRVYTQFTDNALTLPDFFEKRFEDNKGLLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYT LALIIGSTIIVAYTFVGGFFAVSWTDFFQGCLMLIALLIVPVAIFSQPETQAGLENIDPAMLSMFNENTTFIGFISLLAW GLGYFGQPHILSRFMAIASPDDIPVSRRIAMGWMLLALVGALATGIAGSLYFAAEPLSNPETVFIHLAHAAFNPWIGGLL IAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPQATSKELMLVGRIGVLAIAIIAGVVALNPESSVLGLVSYAWAGFGA AFGPVVLLSLFWRGYSRNGAVATIIVGALTVVVWKQLSGHIFDIYEILPGFILASLAGVVISKMQSPSETIKQQFDSFEA KL
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=488, Percent_Identity=46.3114754098361, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI4507035, Length=367, Percent_Identity=26.158038147139, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI11141885, Length=451, Percent_Identity=25.7206208425721, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI17941285, Length=408, Percent_Identity=27.2058823529412, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1787251, Length=498, Percent_Identity=53.4136546184739, Blast_Score=496, Evalue=1e-141, Organism=Escherichia coli, GI87082237, Length=461, Percent_Identity=28.1995661605206, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1790503, Length=463, Percent_Identity=25.2699784017279, Blast_Score=117, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17539284, Length=406, Percent_Identity=23.8916256157635, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533094, Length=422, Percent_Identity=24.8815165876777, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24645928, Length=394, Percent_Identity=26.3959390862944, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI221459584, Length=388, Percent_Identity=23.7113402061856, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24651739, Length=479, Percent_Identity=23.5908141962422, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640370, Length=358, Percent_Identity=26.2569832402235, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24648033, Length=400, Percent_Identity=24, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21356865, Length=400, Percent_Identity=24, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI221459586, Length=385, Percent_Identity=23.3766233766234, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281362918, Length=200, Percent_Identity=29, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 51995; Mature: 51864
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIELPVLITFIAYLSLMMGIGLWAYKATDSVDDYILGGRGMGPAVTALSVGASDMSGWL CEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHEECCCCCCHHHHHHHCCCCCCCCEE LLGLPGAVYLGGLGEAWIGIGLVFGAWLNWLFVAKRLRVYTQFTDNALTLPDFFEKRFED EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC NKGLLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYTLALIIGSTIIVAYTFVGGF CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FAVSWTDFFQGCLMLIALLIVPVAIFSQPETQAGLENIDPAMLSMFNENTTFIGFISLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCHHHHHHHCCCCHHHHHHHHHH WGLGYFGQPHILSRFMAIASPDDIPVSRRIAMGWMLLALVGALATGIAGSLYFAAEPLSN HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC PETVFIHLAHAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPQATSK CCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ELMLVGRIGVLAIAIIAGVVALNPESSVLGLVSYAWAGFGAAFGPVVLLSLFWRGYSRNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AVATIIVGALTVVVWKQLSGHIFDIYEILPGFILASLAGVVISKMQSPSETIKQQFDSFE CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKL CCC >Mature Secondary Structure TIELPVLITFIAYLSLMMGIGLWAYKATDSVDDYILGGRGMGPAVTALSVGASDMSGWL EEEHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHEECCCCCCHHHHHHHCCCCCCCCEE LLGLPGAVYLGGLGEAWIGIGLVFGAWLNWLFVAKRLRVYTQFTDNALTLPDFFEKRFED EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC NKGLLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYTLALIIGSTIIVAYTFVGGF CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FAVSWTDFFQGCLMLIALLIVPVAIFSQPETQAGLENIDPAMLSMFNENTTFIGFISLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCHHHHHHHCCCCHHHHHHHHHH WGLGYFGQPHILSRFMAIASPDDIPVSRRIAMGWMLLALVGALATGIAGSLYFAAEPLSN HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC PETVFIHLAHAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYKKWLRPQATSK CCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ELMLVGRIGVLAIAIIAGVVALNPESSVLGLVSYAWAGFGAAFGPVVLLSLFWRGYSRNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AVATIIVGALTVVVWKQLSGHIFDIYEILPGFILASLAGVVISKMQSPSETIKQQFDSFE CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]