Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962428
Identifier: 157962428
GI number: 157962428
Start: 3175184
End: 3175888
Strand: Direct
Name: 157962428
Synonym: Spea_2607
Alternate gene names: NA
Gene position: 3175184-3175888 (Clockwise)
Preceding gene: 157962427
Following gene: 157962429
Centisome position: 61.36
GC content: 44.82
Gene sequence:
>705_bases ATGGATGAGCTTAAGTTTCGCCGTCAGGCATACAGCGAGCCCAACAGCCAAGAAGCTGACTTCCTCGATGCCGCTATGGA GTCAGCTGAAAGAGAAGCCTTCTTAAATGATCTAAAAGGCTTAGATGCTAAAATAGATCGAGCACTCAAAGTTGATGTAC CAGACGACCTCGCCGCAAAATTATTGCTGCGTCAGCAACTACAACATCACCATACACAGCGCCGCAAAACAGGGTTTGCG TTTGCCCTCGTGGCTTCGATAGCATTTTTAGCGGGAATGACATTTACTCTACTAAGAATGGGACCTGTTGATCTGAGCCA GCATGCTCTAGCCCATGTTTACCATGAGACCGAAGCGCTCAACATTGAGCAAGATGTACCGTTTCAAACGGTAAACTTTC AACTTGCTTCCCTCGGTGGCAATAACAGTATGAAGTTCATCCAGCAGCCCGGCAGAGTCTTTTACAGTACTTACTGTGAT TTTCAAGGGGTAAAAAGCTTGCACTTAGTGATGCAGGGCGAGCAAGAAAAAGTCACTCTGTTTATTGTCCCTCTAGAAGA TCGCATGGTACTGGAAGAAGCCTTTGCCGATAACAAGTATCAAGGTATGGGCTTTGAAACCGATAACGCCTACATGTTAT TAGTTGGTGAACAAAACCAAGACCTCGATTACGTTAAGAACGAAATTGAACAAACATTCATCTAA
Upstream 100 bases:
>100_bases ATTCTCGATTTAAATCGCAATACCGTTATGACACGTTTATTTAGAGCAAGAAACCAACTTAAAGATCAACTCGAGCAACC ACAGTTCAGGGGGCAGTCCA
Downstream 100 bases:
>100_bases CAACCTTTACAACCAATGATGCTTAACACGCATCATTGGTTAGATCTTCATCACATTCCCTCGCTTTATTGGGCCTCAGC TCATAGATCTGCTAGCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MDELKFRRQAYSEPNSQEADFLDAAMESAEREAFLNDLKGLDAKIDRALKVDVPDDLAAKLLLRQQLQHHHTQRRKTGFA FALVASIAFLAGMTFTLLRMGPVDLSQHALAHVYHETEALNIEQDVPFQTVNFQLASLGGNNSMKFIQQPGRVFYSTYCD FQGVKSLHLVMQGEQEKVTLFIVPLEDRMVLEEAFADNKYQGMGFETDNAYMLLVGEQNQDLDYVKNEIEQTFI
Sequences:
>Translated_234_residues MDELKFRRQAYSEPNSQEADFLDAAMESAEREAFLNDLKGLDAKIDRALKVDVPDDLAAKLLLRQQLQHHHTQRRKTGFA FALVASIAFLAGMTFTLLRMGPVDLSQHALAHVYHETEALNIEQDVPFQTVNFQLASLGGNNSMKFIQQPGRVFYSTYCD FQGVKSLHLVMQGEQEKVTLFIVPLEDRMVLEEAFADNKYQGMGFETDNAYMLLVGEQNQDLDYVKNEIEQTFI >Mature_234_residues MDELKFRRQAYSEPNSQEADFLDAAMESAEREAFLNDLKGLDAKIDRALKVDVPDDLAAKLLLRQQLQHHHTQRRKTGFA FALVASIAFLAGMTFTLLRMGPVDLSQHALAHVYHETEALNIEQDVPFQTVNFQLASLGGNNSMKFIQQPGRVFYSTYCD FQGVKSLHLVMQGEQEKVTLFIVPLEDRMVLEEAFADNKYQGMGFETDNAYMLLVGEQNQDLDYVKNEIEQTFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26661; Mature: 26661
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELKFRRQAYSEPNSQEADFLDAAMESAEREAFLNDLKGLDAKIDRALKVDVPDDLAAK CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCHHHHHH LLLRQQLQHHHTQRRKTGFAFALVASIAFLAGMTFTLLRMGPVDLSQHALAHVYHETEAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC NIEQDVPFQTVNFQLASLGGNNSMKFIQQPGRVFYSTYCDFQGVKSLHLVMQGEQEKVTL CCCCCCCEEEEEEEEEECCCCCCHHHHHCCCCEEHHHHCCHHCHHHHHHEECCCCCEEEE FIVPLEDRMVLEEAFADNKYQGMGFETDNAYMLLVGEQNQDLDYVKNEIEQTFI EEEECCHHHHHHHHHCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDELKFRRQAYSEPNSQEADFLDAAMESAEREAFLNDLKGLDAKIDRALKVDVPDDLAAK CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCHHHHHH LLLRQQLQHHHTQRRKTGFAFALVASIAFLAGMTFTLLRMGPVDLSQHALAHVYHETEAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC NIEQDVPFQTVNFQLASLGGNNSMKFIQQPGRVFYSTYCDFQGVKSLHLVMQGEQEKVTL CCCCCCCEEEEEEEEEECCCCCCHHHHHCCCCEEHHHHCCHHCHHHHHHEECCCCCEEEE FIVPLEDRMVLEEAFADNKYQGMGFETDNAYMLLVGEQNQDLDYVKNEIEQTFI EEEECCHHHHHHHHHCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA