Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962403
Identifier: 157962403
GI number: 157962403
Start: 3143691
End: 3145349
Strand: Direct
Name: 157962403
Synonym: Spea_2582
Alternate gene names: NA
Gene position: 3143691-3145349 (Clockwise)
Preceding gene: 157962402
Following gene: 157962404
Centisome position: 60.75
GC content: 47.2
Gene sequence:
>1659_bases ATGCGTTCAATTTTTCCCTTATGCGCGCTAGCCCTGCTCAGTGCTTGCAGCCAGCAAACAAGTAATCTTAACGACCCGAG TGACATAAACTTCGATGAGAGCCGTTTCCGTCAAGACATTAAAACCCTCGCTTCAGATGAGTTTGAAGGTCGCGCGCCGA CAACAAAAGGTGAGCAGTTAACACTGGACTATCTAAGTGATGCCTTTGCCGAAATGGGTCTAGAAAAGCCTAACGGCAAA GATTATTTACAGGCTGTACCTATGGTAAGTTATACCGCATCAGAGCAGCAAACGGTTCGCTTAGGCGATCTCGAGCTTAA GCATCGACAAAATGTCGTACTCGGTAGCCGTCACGATGTAGCCAAAATCGATATCAATAATGCCCCGCTGGTGTTTGTTG GCTATGGTATTAATGCGCCCGAATACCAGTGGAACGATTATCAAGATTTGGATATGACAGGTAAAATCGCGATAATTTTA GTCAATGATCCAGGCTTTGCACGACCCGATTCAGGCAAGTTTAACGGCAAAGCCATGACCTACTATGGCCGCTGGAGTTA TAAGTTTGAGGAGGCCAGTCGTCAAGGAGCCCTAGGCGCAATTATCATTCACGATACCAAACCGGCCTCTTATCCTTGGT CTGTAGTTGAAAACAGTTGGACTGGTGCTCAACAAGATCTGGTTCATAATAGCGATGAACAAAACCAGCGAGTCCAAGTC GAAGGTTGGATAAGCTACGACGCTGCAACGACACTATTTAATAAGACAGGTCTATCCTTAGCGACCGTGTCTGATCGCGC TGCAGCAAGTGCGGTAAATTTACCACTAAATCAAACAGCGACCATTGCCTTTAAGAATAAAGCTGAGTATGCCAATAGTT ATAACGTGGTTGCCACCCTACCCGGTAATAGCCGCGCAGGTGAGCATATACTATTTACCGCTCACTGGGACCATATTGGT GTCGATGCTAACAAAGAGGGCGATCAGATCTACAATGGCGCCCTAGATAACGCCTCAGGCACCGCAGGCATTTTAGAAAT TGCACGTCAGTTCGCGATACAAGCTAAAAATGGTCACCCACTCGCTCGCTCGTTAACCTTTATTGCCACCACAGGTGAAG AGCAAGGCCTGCTAGGGTCTCGTTATTACGCTGCAAACCCTATCTACCCACTGGATAAAAGCGTGGCGGTATTTAACTTA GACAGCACCAATGTCTATGGCCGCACCACAGATTACACCATAGTAGGCAAAGGTAAATCTGAGCTGGAGAATTACCTTGT TGATGCCCTTAAAACCCAAAACAGAACAGCTAAGCGCGAGAAACACCCTGAGTCAGGCGGATTTTTCCGTTCCGATCATT TCAGCTTCGCCAAAGAAGGTGTGCCAGCGGTATTTGCAGGCGGAGGCAGTGAACCGATAGATGAGGCGACTGCACAATAT AAGGCGGCAATGAAATTGAAAATGAAAGGCTGTTACCACAATGTTTGCGACGAGTATCGTGAAGACTGGGATCTATCTGG CGCACTGGAAGACTTAGCCATCTTCTATCAAGCCGCTTCTGTACTGGGTAACAATCACCACTGGCCGGGGTATTTTAAAG GCACTGAGTTTAACGCTTTACGCCCTGCAAACGACAACATAGAGCAAGCGAGCAAATAG
Upstream 100 bases:
>100_bases TTAGATTATTGCCTAGCTCTCTTGCCATTGCGGGCTAATTTCCTCCATCATGATACATCTACCGCTTAAAAGTCTAAAAT AACAATAATAGGACCTATTC
Downstream 100 bases:
>100_bases TATTATACCAATTAGTATAAGAAGTTGATCTACTCAGAGCGTTTTTTGGCAACTAATTCAAGGCGAATAGCTGAAAGAAT AGTTATTCCATTGTGAAGCT
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; Peptidase Family M; M20/M25/M40 Family Peptidase; Leucyl Aminopeptidase; Protein Containing Aminopeptidase Domain; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MRSIFPLCALALLSACSQQTSNLNDPSDINFDESRFRQDIKTLASDEFEGRAPTTKGEQLTLDYLSDAFAEMGLEKPNGK DYLQAVPMVSYTASEQQTVRLGDLELKHRQNVVLGSRHDVAKIDINNAPLVFVGYGINAPEYQWNDYQDLDMTGKIAIIL VNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGAIIIHDTKPASYPWSVVENSWTGAQQDLVHNSDEQNQRVQV EGWISYDAATTLFNKTGLSLATVSDRAAASAVNLPLNQTATIAFKNKAEYANSYNVVATLPGNSRAGEHILFTAHWDHIG VDANKEGDQIYNGALDNASGTAGILEIARQFAIQAKNGHPLARSLTFIATTGEEQGLLGSRYYAANPIYPLDKSVAVFNL DSTNVYGRTTDYTIVGKGKSELENYLVDALKTQNRTAKREKHPESGGFFRSDHFSFAKEGVPAVFAGGGSEPIDEATAQY KAAMKLKMKGCYHNVCDEYREDWDLSGALEDLAIFYQAASVLGNNHHWPGYFKGTEFNALRPANDNIEQASK
Sequences:
>Translated_552_residues MRSIFPLCALALLSACSQQTSNLNDPSDINFDESRFRQDIKTLASDEFEGRAPTTKGEQLTLDYLSDAFAEMGLEKPNGK DYLQAVPMVSYTASEQQTVRLGDLELKHRQNVVLGSRHDVAKIDINNAPLVFVGYGINAPEYQWNDYQDLDMTGKIAIIL VNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGAIIIHDTKPASYPWSVVENSWTGAQQDLVHNSDEQNQRVQV EGWISYDAATTLFNKTGLSLATVSDRAAASAVNLPLNQTATIAFKNKAEYANSYNVVATLPGNSRAGEHILFTAHWDHIG VDANKEGDQIYNGALDNASGTAGILEIARQFAIQAKNGHPLARSLTFIATTGEEQGLLGSRYYAANPIYPLDKSVAVFNL DSTNVYGRTTDYTIVGKGKSELENYLVDALKTQNRTAKREKHPESGGFFRSDHFSFAKEGVPAVFAGGGSEPIDEATAQY KAAMKLKMKGCYHNVCDEYREDWDLSGALEDLAIFYQAASVLGNNHHWPGYFKGTEFNALRPANDNIEQASK >Mature_552_residues MRSIFPLCALALLSACSQQTSNLNDPSDINFDESRFRQDIKTLASDEFEGRAPTTKGEQLTLDYLSDAFAEMGLEKPNGK DYLQAVPMVSYTASEQQTVRLGDLELKHRQNVVLGSRHDVAKIDINNAPLVFVGYGINAPEYQWNDYQDLDMTGKIAIIL VNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGAIIIHDTKPASYPWSVVENSWTGAQQDLVHNSDEQNQRVQV EGWISYDAATTLFNKTGLSLATVSDRAAASAVNLPLNQTATIAFKNKAEYANSYNVVATLPGNSRAGEHILFTAHWDHIG VDANKEGDQIYNGALDNASGTAGILEIARQFAIQAKNGHPLARSLTFIATTGEEQGLLGSRYYAANPIYPLDKSVAVFNL DSTNVYGRTTDYTIVGKGKSELENYLVDALKTQNRTAKREKHPESGGFFRSDHFSFAKEGVPAVFAGGGSEPIDEATAQY KAAMKLKMKGCYHNVCDEYREDWDLSGALEDLAIFYQAASVLGNNHHWPGYFKGTEFNALRPANDNIEQASK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60778; Mature: 60778
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIFPLCALALLSACSQQTSNLNDPSDINFDESRFRQDIKTLASDEFEGRAPTTKGEQL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE TLDYLSDAFAEMGLEKPNGKDYLQAVPMVSYTASEQQTVRLGDLELKHRQNVVLGSRHDV EHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCEEEECCEEECCCCCEEECCCCCE AKIDINNAPLVFVGYGINAPEYQWNDYQDLDMTGKIAIILVNDPGFARPDSGKFNGKAMT EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE YYGRWSYKFEEASRQGALGAIIIHDTKPASYPWSVVENSWTGAQQDLVHNSDEQNQRVQV EEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCEEEE EGWISYDAATTLFNKTGLSLATVSDRAAASAVNLPLNQTATIAFKNKAEYANSYNVVATL EEEEEECHHHHHHHCCCCEEEEECCHHHHHEECCCCCCEEEEEECCCHHCCCCCCEEEEC PGNSRAGEHILFTAHWDHIGVDANKEGDQIYNGALDNASGTAGILEIARQFAIQAKNGHP CCCCCCCCEEEEEEECCEECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCC LARSLTFIATTGEEQGLLGSRYYAANPIYPLDKSVAVFNLDSTNVYGRTTDYTIVGKGKS HHHEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHH ELENYLVDALKTQNRTAKREKHPESGGFFRSDHFSFAKEGVPAVFAGGGSEPIDEATAQY HHHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCHHHHHCCCCEEEECCCCCCHHHHHHHH KAAMKLKMKGCYHNVCDEYREDWDLSGALEDLAIFYQAASVLGNNHHWPGYFKGTEFNAL HHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC RPANDNIEQASK CCCCCCHHHCCC >Mature Secondary Structure MRSIFPLCALALLSACSQQTSNLNDPSDINFDESRFRQDIKTLASDEFEGRAPTTKGEQL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE TLDYLSDAFAEMGLEKPNGKDYLQAVPMVSYTASEQQTVRLGDLELKHRQNVVLGSRHDV EHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEECCCCCEEEECCEEECCCCCEEECCCCCE AKIDINNAPLVFVGYGINAPEYQWNDYQDLDMTGKIAIILVNDPGFARPDSGKFNGKAMT EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE YYGRWSYKFEEASRQGALGAIIIHDTKPASYPWSVVENSWTGAQQDLVHNSDEQNQRVQV EEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCEEEE EGWISYDAATTLFNKTGLSLATVSDRAAASAVNLPLNQTATIAFKNKAEYANSYNVVATL EEEEEECHHHHHHHCCCCEEEEECCHHHHHEECCCCCCEEEEEECCCHHCCCCCCEEEEC PGNSRAGEHILFTAHWDHIGVDANKEGDQIYNGALDNASGTAGILEIARQFAIQAKNGHP CCCCCCCCEEEEEEECCEECCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCC LARSLTFIATTGEEQGLLGSRYYAANPIYPLDKSVAVFNLDSTNVYGRTTDYTIVGKGKS HHHEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHH ELENYLVDALKTQNRTAKREKHPESGGFFRSDHFSFAKEGVPAVFAGGGSEPIDEATAQY HHHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCHHHHHCCCCEEEECCCCCCHHHHHHHH KAAMKLKMKGCYHNVCDEYREDWDLSGALEDLAIFYQAASVLGNNHHWPGYFKGTEFNAL HHHHHEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCC RPANDNIEQASK CCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA