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The map label for this gene is nagD [H]

Identifier: 157962402

GI number: 157962402

Start: 3142705

End: 3143451

Strand: Direct

Name: nagD [H]

Synonym: Spea_2581

Alternate gene names: 157962402

Gene position: 3142705-3143451 (Clockwise)

Preceding gene: 157962399

Following gene: 157962403

Centisome position: 60.73

GC content: 46.32

Gene sequence:

>747_bases
ATGAAAAATATTATTTGCGATATCGATGGAGTTTTACTGCACAACAATAAGCTAATACCTGGCAGCGACAAGTTTATTCA
CCGCATACTCGAGCAAGGCAATCCACTCGTAGTGCTGACCAACTATCCGGTACAAACAGGTAAAGATCTACAAAACCGCC
TAGGTGCAGCAGGGCTCAATGTACCTGAAGAATGCTTTTACACCGCAGCGATGGCCACTGCGGATTTTCTCAAACATCAA
CAAGGCACCAAGGCCTTCGTGATTGGTGAAGGCGCATTAACTCATGAGCTATATAAAGCGGGCTTTACAATTACCGATAT
TAACCCTGACTTTGTTATCGTGGGGGAAACCCGCTCCTACAACTGGGACATGATCCATAAGGCCGCAAAATTTGTTAGTG
AGGGCGCACGCTTTATTGCGACTAACCCTGATACTCACGGTCCTTCCTTTAGTCCGGCGTGTGGGGCGCTATGTGCTCCC
ATCGAGCGGATCAGTGGTAAGAAACCTTTCTATGTCGGTAAACCAAGCTCATGGATAATACGTTCGGCGTTAAACCACAT
TGGCGGGCACTCTGAAAATACGATTATCATTGGCGACAATATGCGTACCGATATTCTTGCAGGCTTTCAAGCTGGCCTTG
AAACCATTTTGGTGACTAGCGGTGTTAGCTCACTTGCGGATATAGACAAAGAGCCCTTTAGGCCAAACCATATTTTTAAC
TGCGCCGGTGATATCGACGTCATATAA

Upstream 100 bases:

>100_bases
TTTTATCTCACCAAGCGATAAAAGACATTGTTTTTCAACTCCAATTAGCATTAGATTAAGGTCACTTATTCGGCAAACTA
ATGTGAAGTAAGAGAATCTA

Downstream 100 bases:

>100_bases
CTGTTCGAGCTTTCAAATGTAGAAGGTTTCACTAGTCTGTATAGGCCTAACAGCTTATATAGCTTTGCTTCTACATTTGA
ATAAATATCAAATCTCACAT

Product: UMP phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNIICDIDGVLLHNNKLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGGHSENTIIIGDNMRTDILAGFQAGLETILVTSGVSSLADIDKEPFRPNHIFN
CAGDIDVI

Sequences:

>Translated_248_residues
MKNIICDIDGVLLHNNKLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGGHSENTIIIGDNMRTDILAGFQAGLETILVTSGVSSLADIDKEPFRPNHIFN
CAGDIDVI
>Mature_248_residues
MKNIICDIDGVLLHNNKLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLNVPEECFYTAAMATADFLKHQ
QGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAP
IERISGKKPFYVGKPSSWIIRSALNHIGGHSENTIIIGDNMRTDILAGFQAGLETILVTSGVSSLADIDKEPFRPNHIFN
CAGDIDVI

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=250, Percent_Identity=26.4, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI108796653, Length=261, Percent_Identity=27.5862068965517, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI14149777, Length=247, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786890, Length=248, Percent_Identity=72.1774193548387, Blast_Score=390, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI17562458, Length=286, Percent_Identity=26.5734265734266, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560956, Length=286, Percent_Identity=26.5734265734266, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17558880, Length=265, Percent_Identity=27.5471698113208, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71984613, Length=267, Percent_Identity=25.4681647940075, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562356, Length=228, Percent_Identity=24.1228070175439, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193210059, Length=259, Percent_Identity=23.9382239382239, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6319965, Length=234, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666141, Length=254, Percent_Identity=27.9527559055118, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24656326, Length=254, Percent_Identity=23.2283464566929, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24656330, Length=251, Percent_Identity=25.0996015936255, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26921; Mature: 26921

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIICDIDGVLLHNNKLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLN
CCCEEECCCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCC
VPEECFYTAAMATADFLKHQQGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAPIERISGKKPFYVGKPSSWII
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH
RSALNHIGGHSENTIIIGDNMRTDILAGFQAGLETILVTSGVSSLADIDKEPFRPNHIFN
HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCCCCEEE
CAGDIDVI
CCCCCCCC
>Mature Secondary Structure
MKNIICDIDGVLLHNNKLIPGSDKFIHRILEQGNPLVVLTNYPVQTGKDLQNRLGAAGLN
CCCEEECCCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCC
VPEECFYTAAMATADFLKHQQGTKAFVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWDMIHKAAKFVSEGARFIATNPDTHGPSFSPACGALCAPIERISGKKPFYVGKPSSWII
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH
RSALNHIGGHSENTIIIGDNMRTDILAGFQAGLETILVTSGVSSLADIDKEPFRPNHIFN
HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCHHHHHHCCCCCCCCCCEEE
CAGDIDVI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]