Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962377
Identifier: 157962377
GI number: 157962377
Start: 3109992
End: 3110324
Strand: Direct
Name: 157962377
Synonym: Spea_2556
Alternate gene names: NA
Gene position: 3109992-3110324 (Clockwise)
Preceding gene: 157962375
Following gene: 157962379
Centisome position: 60.1
GC content: 47.45
Gene sequence:
>333_bases ATGAAAAAACTTGGTATCGCACTCATCGCGTTAGTACTCAGTGCTTGCGCCTCTTCTCCTGCGACGTGGAAAGGTATGTC TGAAAGAGACATTGCAGCATGGAAAGATATTGGCTTTAATGCTGAGCAAGCTCAGGCTTGGAAAGGCGCAGGGTTTAATG CTGAGCAGTCGAGCGGATGGGCAAAAGCTGGCTTTAATTTGGAGAATGCCCAGAGCTGGAAAAACCAATCTTTTAATCCA GAAGAAGCGAAAAGTTGGAAGACTAGCGGTTTCGACGTAGAGACAGCCGTTGAGTCTCGGGATCAAGGGCTTACGCCCGT TAAGGTTGAATAA
Upstream 100 bases:
>100_bases CTATCAAACACTCAATTTCGTGTTTTCGAAAGTAAGTCTCGGAGCGTCCAACGACTTCGACAGGTATAGCAATAACGATT GAATGACAAAGGAAAGTGAT
Downstream 100 bases:
>100_bases GCATCCCCGCATCATAAAGGCACATTGGTATACGTGCCTTTATGATTTTTAGACCTTTGAGTAAATTATTTTTTCCTTAC TAGGCTTGAGATTAATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKKLGIALIALVLSACASSPATWKGMSERDIAAWKDIGFNAEQAQAWKGAGFNAEQSSGWAKAGFNLENAQSWKNQSFNP EEAKSWKTSGFDVETAVESRDQGLTPVKVE
Sequences:
>Translated_110_residues MKKLGIALIALVLSACASSPATWKGMSERDIAAWKDIGFNAEQAQAWKGAGFNAEQSSGWAKAGFNLENAQSWKNQSFNP EEAKSWKTSGFDVETAVESRDQGLTPVKVE >Mature_110_residues MKKLGIALIALVLSACASSPATWKGMSERDIAAWKDIGFNAEQAQAWKGAGFNAEQSSGWAKAGFNLENAQSWKNQSFNP EEAKSWKTSGFDVETAVESRDQGLTPVKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11909; Mature: 11909
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLGIALIALVLSACASSPATWKGMSERDIAAWKDIGFNAEQAQAWKGAGFNAEQSSGW CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC AKAGFNLENAQSWKNQSFNPEEAKSWKTSGFDVETAVESRDQGLTPVKVE CCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCEECC >Mature Secondary Structure MKKLGIALIALVLSACASSPATWKGMSERDIAAWKDIGFNAEQAQAWKGAGFNAEQSSGW CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC AKAGFNLENAQSWKNQSFNPEEAKSWKTSGFDVETAVESRDQGLTPVKVE CCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA