Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is acsA [H]
Identifier: 157962379
GI number: 157962379
Start: 3113995
End: 3115947
Strand: Direct
Name: acsA [H]
Synonym: Spea_2558
Alternate gene names: 157962379
Gene position: 3113995-3115947 (Clockwise)
Preceding gene: 157962377
Following gene: 157962380
Centisome position: 60.18
GC content: 48.13
Gene sequence:
>1953_bases ATGAGCACGCAGTCTCTCTATAAAGTACCAAGTGAAATCGCTGCAAACGCACTTGTAAACGATGAACAATATAAAAAAAT GTATCAGGAGTCGATTGTAAACCCTGAAGGTTTCTGGAGAGAACACGGTAACCGTATCGACTGGATCAAACCTTTTACTA AGGTAAAGAAAACCTCATTCGATGACCACAATCTATTTATCAAGTGGTTCTATGACGGCACGCTCAATGCCTCTGCTAAC TGTTTAGACAGGCACCTTGAAAACAATGCCGATAAATTAGCAATTATCTGGGAAGGTGATGACGCTAAAGATCAGCGCAC TCTAACTTACGGCCAGCTTCACGCCGAAGTTTGTAAATTCGCTAATGCACTTCGTAGCCAGGGTGTACGTCGAGGCGATG TTGTGACTGTTTACATGCCTATGGTGCCAGAGGCCGCAGTCGCCATGCTTGCATGTGCCCGAATTGGTGCAATTCATTCG GTTGTATTTGGTGGCTTCTCACCGGACTCTATTGCTTCTCGCGTTATCGATGGCAACTCAAAAGTCGTCATCACTGCCGA TGAAGGCGTTCGTGCCGGCCGTATCATTCCTCTAAAAGCCAATATTGATGAAGCCCTTTCTCACCCTGATGTCAATTGCG TCGAAAAAGTGATCGTGATGAAACGCACAGGCGGTGATATTAACTGGGTAGAAGGTCGTGATATCTGGTGGGGATCTTTA ATGGAGACCGCATCTGAGCATTGCATTCCTGAAGAGATGGGTGCCGAAGATCCGCTATTCTTACTCTATACCTCGGGCTC CACCGGTAATCCTAAAGGTGTGCTGCACACTACAGGTGGTTACATGGTTTATGCGGCCATGACTCACGAGTACGTATTCG ACTATAAAGAAAATGAAGTCTATTGGTGTACGGCTGATGTTGGCTGGATCACAGGCCACTCTTATATGGTCTACGGACCA CTCGCCAATGGCGCGACAGTGCTTATTCACGAAGGTGTACCAAACTATCCAACCCCTGCACGCTTAGGTGAGATGGTTGA CCGTCATAAAGTAAACATTCTATATACGGCTCCAACCCTTATTCGCGCACTCATGGCTGAAGGCAAAGAACAATTCGAAG GGTTTGACGGTAGTTCGTTACGTATTATGGGATCTGTCGGTGAGCCGATTAACCCAGAGGCTTGGCGCTGGTATAACGAT GTTATTGGCCATGAAAAATGCCCAATCGTAGATACTTGGTGGCAGACTGAAACTGGCGGCATCTTGATCAGCCCGCTACC AGGTGCCACAGATACCAAACCTGGATCCGCGACTCGCCCATTCTTTGGCGTACAGCCGGCTCTTGTCGATAATATAGGTA ATATCGTCGAAGGAGCTAACGAAGGTAACTTAGTTATCTTAGACTCTTGGCCTGGACAGATGCGTACGGTATTCGGCGAC CACGACAGATTCGTACTCACCTACTTTAAAACCTTCAGAGGCATGTACTTTACAGGTGATGGCGCTAGGCGTGATGAAGA TGGTTACTACTGGATCACCGGCCGTGTGGATGATGTGATTAATGTGTCGGGGCACCGCTTAGGTACTGCAGAAGTAGAAA GCGCATTGGTCGCCCATGAACTCGTTGCCGAAGCCGCTGTAGTAGGTTACCCCCATGACATTAAGGGCCAAGGTATTTAC GCCTATGTCACCTTAACTAAAGGCTCGGTTGAAACAGAGGAGCTTCGTCAAGAACTGAGACAGTGGGTTCGTAAAGAGAT TGGCGCACTGGCAACGCCAGATCTTATCCAATGGGCTGGCGGCTTACCTAAGACACGTTCAGGTAAGATCATGCGTCGCT TCCTGCGTAAGATTGCCGCAAACGAGGTCACTAACCTAGGTGACTCATCGACTCTCGCAGATCCAGCGGTAATCGATACC TTGATTGAGACTCGCCTTAATCGCAGCGAATAG
Upstream 100 bases:
>100_bases AAAAAATAAGGATATTTAATTACTAGACCAAGGTCTAATAGAGAAATAACCCCTTCCCAATCCATACTCAGCTTACGCAT TATTAGATAAGGGAAGCCAA
Downstream 100 bases:
>100_bases TTAATTTTCATCAAGTAAAATATCTATTGTTTGACCTCCCCTAGCCCCTCTATGAGGGGCTTTTTTTGTCCCATTTTTCC ATCAATATATACAAAAACAA
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASAN CLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHAEVCKFANALRSQGVRRGDVVTVYMPMVPEAAVAMLACARIGAIHS VVFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWGSL METASEHCIPEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGP LANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYND VIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGD HDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHELVAEAAVVGYPHDIKGQGIY AYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVTNLGDSSTLADPAVIDT LIETRLNRSE
Sequences:
>Translated_650_residues MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASAN CLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHAEVCKFANALRSQGVRRGDVVTVYMPMVPEAAVAMLACARIGAIHS VVFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWGSL METASEHCIPEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGP LANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYND VIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGD HDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHELVAEAAVVGYPHDIKGQGIY AYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVTNLGDSSTLADPAVIDT LIETRLNRSE >Mature_649_residues STQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASANC LDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHAEVCKFANALRSQGVRRGDVVTVYMPMVPEAAVAMLACARIGAIHSV VFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWGSLM ETASEHCIPEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGPL ANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYNDV IGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGDH DRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHELVAEAAVVGYPHDIKGQGIYA YVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVTNLGDSSTLADPAVIDTL IETRLNRSE
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=670, Percent_Identity=51.7910447761194, Blast_Score=680, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=683, Percent_Identity=50.805270863836, Blast_Score=676, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=624, Percent_Identity=48.2371794871795, Blast_Score=617, Evalue=1e-176, Organism=Homo sapiens, GI13375727, Length=631, Percent_Identity=36.1331220285262, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI42544132, Length=533, Percent_Identity=29.6435272045028, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI122937307, Length=550, Percent_Identity=28.3636363636364, Blast_Score=196, Evalue=8e-50, Organism=Homo sapiens, GI38505220, Length=515, Percent_Identity=29.7087378640777, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI115511026, Length=512, Percent_Identity=29.4921875, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI31982927, Length=653, Percent_Identity=25.5742725880551, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI58082049, Length=513, Percent_Identity=27.2904483430799, Blast_Score=166, Evalue=8e-41, Organism=Homo sapiens, GI157311624, Length=494, Percent_Identity=26.9230769230769, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI157311622, Length=494, Percent_Identity=26.9230769230769, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI195947378, Length=408, Percent_Identity=25, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI187761345, Length=409, Percent_Identity=26.4058679706601, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI187761343, Length=409, Percent_Identity=26.4058679706601, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI42544134, Length=351, Percent_Identity=26.2108262108262, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI156151445, Length=585, Percent_Identity=21.5384615384615, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790505, Length=645, Percent_Identity=68.8372093023256, Blast_Score=959, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=630, Percent_Identity=38.5714285714286, Blast_Score=417, Evalue=1e-118, Organism=Escherichia coli, GI1788107, Length=592, Percent_Identity=23.6486486486486, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI221142682, Length=528, Percent_Identity=21.5909090909091, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI145693145, Length=380, Percent_Identity=24.4736842105263, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1786810, Length=559, Percent_Identity=20.9302325581395, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1789201, Length=368, Percent_Identity=23.0978260869565, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71982997, Length=663, Percent_Identity=50.6787330316742, Blast_Score=634, Evalue=0.0, Organism=Caenorhabditis elegans, GI71983001, Length=661, Percent_Identity=50.8320726172466, Blast_Score=634, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=619, Percent_Identity=22.7786752827141, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17558820, Length=519, Percent_Identity=23.8921001926782, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI32563687, Length=541, Percent_Identity=22.181146025878, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560308, Length=566, Percent_Identity=24.0282685512367, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=32.1167883211679, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17560140, Length=376, Percent_Identity=22.3404255319149, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557194, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=643, Percent_Identity=48.9891135303266, Blast_Score=625, Evalue=1e-180, Organism=Saccharomyces cerevisiae, GI6319264, Length=645, Percent_Identity=46.3565891472868, Blast_Score=568, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6319699, Length=377, Percent_Identity=22.5464190981432, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667955, Length=664, Percent_Identity=52.1084337349398, Blast_Score=672, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=55.6939501779359, Blast_Score=622, Evalue=1e-178, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=56.1538461538462, Blast_Score=580, Evalue=1e-165, Organism=Drosophila melanogaster, GI21355225, Length=646, Percent_Identity=34.3653250773994, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24581924, Length=545, Percent_Identity=21.651376146789, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI18859661, Length=121, Percent_Identity=33.8842975206612, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI21358303, Length=561, Percent_Identity=20.855614973262, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 72107; Mature: 71976
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSF CCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCC DDHNLFIKWFYDGTLNASANCLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHAEVCKF CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHH ANALRSQGVRRGDVVTVYMPMVPEAAVAMLACARIGAIHSVVFGGFSPDSIASRVIDGNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWGSL EEEEECCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHEEEECCCCEEEECCCCCCHHHH METASEHCIPEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEV HHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGG HHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHEECC HDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHE CCCCCEEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH LVAEAAVVGYPHDIKGQGIYAYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAG HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GLPKTRSGKIMRRFLRKIAANEVTNLGDSSTLADPAVIDTLIETRLNRSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure STQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSF CCCHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCC DDHNLFIKWFYDGTLNASANCLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHAEVCKF CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHH ANALRSQGVRRGDVVTVYMPMVPEAAVAMLACARIGAIHSVVFGGFSPDSIASRVIDGNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWGSL EEEEECCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHEEEECCCCEEEECCCCCCHHHH METASEHCIPEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEV HHHHHHCCCHHHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPTPARLGEMVDRHKVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKEQFEGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGG HHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDTKPGSATRPFFGVQPALVDNIGNIVEGANEGNLVILDSWPGQMRTVFGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHEECC HDRFVLTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHE CCCCCEEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH LVAEAAVVGYPHDIKGQGIYAYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAG HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GLPKTRSGKIMRRFLRKIAANEVTNLGDSSTLADPAVIDTLIETRLNRSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA