Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962365
Identifier: 157962365
GI number: 157962365
Start: 3095982
End: 3096326
Strand: Direct
Name: 157962365
Synonym: Spea_2544
Alternate gene names: NA
Gene position: 3095982-3096326 (Clockwise)
Preceding gene: 157962364
Following gene: 157962371
Centisome position: 59.83
GC content: 42.03
Gene sequence:
>345_bases ATGGTGACATTCAAGTACGATCTTAACCAAGATAACATCGAGCTACAGGCGAGTAACTGGTCTGGTTTAGAGCAGATGTA CATCAATGGTACGCATGTCTCTAGCAAGCTTAATTTCGGCCAACACAGTGAGCATAACCTAGTACTGAATGATGGCAAGC AAGCAAAATTGCATCTGTTTTTCGACCCACTGACGGAGCAGCTTATCTGTCGTATTTACAAACAAAACAACTTGGTCGCC AGCCTAAAACAAGGTAAGGAGGAGCTATACCGTAGTCGAAAACTCACTCAACTGGGAATATTAGCAATGGGGATAATTAT CGTGTTGCTACTCACTTTAAGTTAA
Upstream 100 bases:
>100_bases TAGATAAGGGATTATCCCACCTCAATTGGCAGTTCACACTGGCGAAGATGCCTTTCCTCTGCTTAAGTTAAGGGCTCAAT TATTAGAAATAGGTCACACT
Downstream 100 bases:
>100_bases CGGTGAACGCTAACCTAAAGTACTTTAAACTTTATAACTGAAAGCTATAAAACCAAAACTGCAGCTAGCATAGTGAAATA CTGTCACCTTGGATGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MVTFKYDLNQDNIELQASNWSGLEQMYINGTHVSSKLNFGQHSEHNLVLNDGKQAKLHLFFDPLTEQLICRIYKQNNLVA SLKQGKEELYRSRKLTQLGILAMGIIIVLLLTLS
Sequences:
>Translated_114_residues MVTFKYDLNQDNIELQASNWSGLEQMYINGTHVSSKLNFGQHSEHNLVLNDGKQAKLHLFFDPLTEQLICRIYKQNNLVA SLKQGKEELYRSRKLTQLGILAMGIIIVLLLTLS >Mature_114_residues MVTFKYDLNQDNIELQASNWSGLEQMYINGTHVSSKLNFGQHSEHNLVLNDGKQAKLHLFFDPLTEQLICRIYKQNNLVA SLKQGKEELYRSRKLTQLGILAMGIIIVLLLTLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13047; Mature: 13047
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTFKYDLNQDNIELQASNWSGLEQMYINGTHVSSKLNFGQHSEHNLVLNDGKQAKLHLF CEEEEEECCCCCEEEEECCCCCCEEEEECCEECCCCCCCCCCCCCCEEEECCCCEEEEEE FDPLTEQLICRIYKQNNLVASLKQGKEELYRSRKLTQLGILAMGIIIVLLLTLS ECHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTFKYDLNQDNIELQASNWSGLEQMYINGTHVSSKLNFGQHSEHNLVLNDGKQAKLHLF CEEEEEECCCCCEEEEECCCCCCEEEEECCEECCCCCCCCCCCCCCEEEECCCCEEEEEE FDPLTEQLICRIYKQNNLVASLKQGKEELYRSRKLTQLGILAMGIIIVLLLTLS ECHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA