Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yfiK [C]
Identifier: 157962347
GI number: 157962347
Start: 3077683
End: 3078288
Strand: Reverse
Name: yfiK [C]
Synonym: Spea_2526
Alternate gene names: 157962347
Gene position: 3078288-3077683 (Counterclockwise)
Preceding gene: 157962349
Following gene: 157962345
Centisome position: 59.49
GC content: 46.53
Gene sequence:
>606_bases ATGGATGGGATATGGGCAATGATGATCTCAGCGGCAATATTCTGCGCAACCATGACGATGACTCCAGGGCCAAACAATAT ACTGCTGACGACCTCGGGCGCGAACTTTGGTGTTAGGCGCACCTTGCCTCATATTATCGGGATCCGTGTTGGTCAGACAC TGCTGCATATAGCAATACTTCTTGGATTAGGTAGCATGTTTGAGGCTTGGCCTGCTATGCATCAGGTATTGAGGGTTACC TCTATAGCCTATCTGTTATTTCTCGCTTATCGAGTCATTACCACGCCAGTGGATGACGGACTAACACTCATTGAGGGGCA GCCGATGACAATGAGAGAGTCGGCACTGTTTCAGTGGATCAATCCCAAATCATGGCTTGCTACCATTACGCTCTGTACCG CTTTTACCGTCTCGGGTGACAGTTATTGGCTTAGTGCAATGATGGGCGTGTTGGTATTTAATATTGTTGGTTTCCCTGCA TCATTTACCTGGGTGATTTTAGGCGCGAGAATTAGTAATAAGCTCAATACTCCTGCTCGGCGTAAAGGTTTTAACTGGAG TATGGGCGGTCTATTGTTAGTCACCATTCCAATGATAATTCACTAA
Upstream 100 bases:
>100_bases AAGTATTGTACTCATACAATTCTGTGTGGGTTAAGACCCAATATTAAAAGACAAAAGTAAAAAACGTGTGTATCAGTTTT AGGTAAAGTGGGGGTAAACA
Downstream 100 bases:
>100_bases AGCGTCCAAACATTTAATTGCAGCTGTTTCGAATCTAGTATGACTTTTTAATTTAGCTAATCCAGCCCAAGCTGAAAACT TTCACCGCTCTCAAGCCACG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter LysE Family; Threonine Efflux Protein; Translocator Protein LysE Family; Amino Acid Efflux Protein; RhtB Family Transporter; LysE Family Protein; Transporter Protein; Inner Membrane Protein; Amino Acid Efflux Protein LysE Family; Transporter LysE Family Protein; LysE Family Transporter; Transporter Subunit; Efflux Protein LysE Family; Transmembrane Transporter Protein; Amino Acid Efflux Pump RhtB Family Protein; ABC Transporter; LysE/RhtB Family Efflux Protein; LysE-Type Translocator; LysE Type Translocator Family; LOW QUALITY PROTEIN Lysine Exporter Protein LysE; LysE Type Translocator Family Protein; RhtB Family Protein; Neutral Amino-Acid Efflux System; Transporter-LysE Family; Transmembrane Transporter Protein LysE Type Translocator; LysE Family Translocator Protein; Lysing Exporter Protein; Amino Acid Exporter
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDGIWAMMISAAIFCATMTMTPGPNNILLTTSGANFGVRRTLPHIIGIRVGQTLLHIAILLGLGSMFEAWPAMHQVLRVT SIAYLLFLAYRVITTPVDDGLTLIEGQPMTMRESALFQWINPKSWLATITLCTAFTVSGDSYWLSAMMGVLVFNIVGFPA SFTWVILGARISNKLNTPARRKGFNWSMGGLLLVTIPMIIH
Sequences:
>Translated_201_residues MDGIWAMMISAAIFCATMTMTPGPNNILLTTSGANFGVRRTLPHIIGIRVGQTLLHIAILLGLGSMFEAWPAMHQVLRVT SIAYLLFLAYRVITTPVDDGLTLIEGQPMTMRESALFQWINPKSWLATITLCTAFTVSGDSYWLSAMMGVLVFNIVGFPA SFTWVILGARISNKLNTPARRKGFNWSMGGLLLVTIPMIIH >Mature_201_residues MDGIWAMMISAAIFCATMTMTPGPNNILLTTSGANFGVRRTLPHIIGIRVGQTLLHIAILLGLGSMFEAWPAMHQVLRVT SIAYLLFLAYRVITTPVDDGLTLIEGQPMTMRESALFQWINPKSWLATITLCTAFTVSGDSYWLSAMMGVLVFNIVGFPA SFTWVILGARISNKLNTPARRKGFNWSMGGLLLVTIPMIIH
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22091; Mature: 22091
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIWAMMISAAIFCATMTMTPGPNNILLTTSGANFGVRRTLPHIIGIRVGQTLLHIAIL CCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLGSMFEAWPAMHQVLRVTSIAYLLFLAYRVITTPVDDGLTLIEGQPMTMRESALFQWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC NPKSWLATITLCTAFTVSGDSYWLSAMMGVLVFNIVGFPASFTWVILGARISNKLNTPAR CCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHCCCCCCHH RKGFNWSMGGLLLVTIPMIIH HCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MDGIWAMMISAAIFCATMTMTPGPNNILLTTSGANFGVRRTLPHIIGIRVGQTLLHIAIL CCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLGSMFEAWPAMHQVLRVTSIAYLLFLAYRVITTPVDDGLTLIEGQPMTMRESALFQWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC NPKSWLATITLCTAFTVSGDSYWLSAMMGVLVFNIVGFPASFTWVILGARISNKLNTPAR CCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHHHCCCCCCHH RKGFNWSMGGLLLVTIPMIIH HCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA