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The map label for this gene is ycfJ [C]

Identifier: 157962349

GI number: 157962349

Start: 3079920

End: 3080396

Strand: Reverse

Name: ycfJ [C]

Synonym: Spea_2528

Alternate gene names: 157962349

Gene position: 3080396-3079920 (Counterclockwise)

Preceding gene: 157962353

Following gene: 157962347

Centisome position: 59.53

GC content: 46.75

Gene sequence:

>477_bases
ATGTTGAAACATCATCTTATTGTTTTCACGGTTATCTGTTTATTTTTTGGTACGCAGAGCGTTTTTGCAGCGCCTTATGA
TCGTAATCAGGCCGTGCCAGTCGAGAAAGTGGAGTTCGGTCAAGTGGTCTCGGTGCGTAACATTACCCAAAAGCAGCTTG
TCGAAGATCGCAACACAGGCTGGAAAACTTTTGGTGGTGCACTGATTGGTGGCGTTATTGGTCATCAATTTGGTGGCGGT
TCAGGTCAAGATGTGGCCACGGTTTTAGGGGCCTTACTAGGGGCTAGAGTCGGGAACACTTATGGTGACAGCTCCTATTA
CCAAGAGTTAAAGCTAGTGGAGATGATGATAGCCTTAGACACTGGCGAGCAGGTGATGGTGATTCAAGATTTGGATCCCG
GAATGATATTCAATGTCAACGATGAGGTCAGGGTTGTCTACTTACAAGGGTTTGTCAGGGTCGATCGTCAGATGTAG

Upstream 100 bases:

>100_bases
GCGGAAAAGCTTGCTGCGCGTGATTTAAATAGGACAGTGAGTTCACAATTGAGTAAGATTAATAAATATACTTATCCTTA
AAGTTAGCGGAAAAAGTCTT

Downstream 100 bases:

>100_bases
GTACGCTTTTTTAGACTGCTTAAAGCCGCTAAAATAGCGGCTTTTTTGTGTCTTGGTTTTAGTCGATTACAAATGTCAGC
TTGTGGCTGTAAACTCTTTT

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Lipoprotein; Surface Antigen

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLKHHLIVFTVICLFFGTQSVFAAPYDRNQAVPVEKVEFGQVVSVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGARVGNTYGDSSYYQELKLVEMMIALDTGEQVMVIQDLDPGMIFNVNDEVRVVYLQGFVRVDRQM

Sequences:

>Translated_158_residues
MLKHHLIVFTVICLFFGTQSVFAAPYDRNQAVPVEKVEFGQVVSVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGARVGNTYGDSSYYQELKLVEMMIALDTGEQVMVIQDLDPGMIFNVNDEVRVVYLQGFVRVDRQM
>Mature_158_residues
MLKHHLIVFTVICLFFGTQSVFAAPYDRNQAVPVEKVEFGQVVSVRNITQKQLVEDRNTGWKTFGGALIGGVIGHQFGGG
SGQDVATVLGALLGARVGNTYGDSSYYQELKLVEMMIALDTGEQVMVIQDLDPGMIFNVNDEVRVVYLQGFVRVDRQM

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17387; Mature: 17387

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHHLIVFTVICLFFGTQSVFAAPYDRNQAVPVEKVEFGQVVSVRNITQKQLVEDRNTG
CCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
WKTFGGALIGGVIGHQFGGGSGQDVATVLGALLGARVGNTYGDSSYYQELKLVEMMIALD
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
TGEQVMVIQDLDPGMIFNVNDEVRVVYLQGFVRVDRQM
CCCEEEEEEECCCCEEEECCCCEEEEEEECHHHHCCCC
>Mature Secondary Structure
MLKHHLIVFTVICLFFGTQSVFAAPYDRNQAVPVEKVEFGQVVSVRNITQKQLVEDRNTG
CCCHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
WKTFGGALIGGVIGHQFGGGSGQDVATVLGALLGARVGNTYGDSSYYQELKLVEMMIALD
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
TGEQVMVIQDLDPGMIFNVNDEVRVVYLQGFVRVDRQM
CCCEEEEEEECCCCEEEECCCCEEEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA