Click here to switch to the map view.

The map label for this gene is yfbK [C]

Identifier: 157962337

GI number: 157962337

Start: 3064855

End: 3067224

Strand: Reverse

Name: yfbK [C]

Synonym: Spea_2516

Alternate gene names: 157962337

Gene position: 3067224-3064855 (Counterclockwise)

Preceding gene: 157962338

Following gene: 157962336

Centisome position: 59.27

GC content: 46.08

Gene sequence:

>2370_bases
ATGACTAGGTATTTTTCTAGATTCAGTCATCGCCAAGGAGGCCCCCGTTTGGGGGCTTTAATGGCAGCTAAAACTAATTT
GAAACTGGCAATGGTGTCGATGTGTTGCTTACTGTTGCCAATGAACGCTATAGCAATGCAAACGACAGAACCCTTTAGCA
TTGATGCAGTTAAGCAGGGGAGCCTAGTGTTTGAAAATCCCCAAGGTGAGATAGCGTTGGCACTACCGATGAAAACCGAC
GTCAGTATGCAGGTATCTGGCTGGATTAACCGAGTGTCGGTTCGCCATGAATTCAAAAATACCAGTACAGAGTGGGTTAA
TGGTCAGTATCTATTTCCCCTACCTAATGAGGCGGCCGTTGATCAGCTCAGACTTCATATCGGTGACAGGATTATAGAGG
GACAAATTCAGCCTAAGGCTAAGGCAAAGGCGATATTTGAACAGGCTAAATCTCAGGGGAAGAGGGCCAGTTTGCTGGAG
CAGAAAAGGCCTAACATCTTTAGCGCTAAGGTTGCCAATCTAGCCCCTAATGAGATGCTGGTGGTGGAGTTGACCTATCA
AGAAACCTTAGATTATCGAGATGGTGAATTTAGCTTGCGATTTCCTATGGTTGTCGCGCCAAGATATGCGCCTAGGCAGG
CTGCCTATCCTCGCCAGAAAGAAAGTGCCCATCTAAAAGAAAGCGTCTACTTAAAAGATAGTGCAAAAGCCCTCAGTGAT
GAGATTGATAGCAGTGTTAAGCCTGCTGAATATGCACAGTATTATGCCAAAAAACAGCTAAGTTCATTTGATATTCACGA
CCAAGTTTCAGCTCCGGAACGCATATTTGATGAGGCACCAATGGCAGAGCAGCATAATAACCGAGTGGCATTAAAAGTGG
CATTTGATAGTGAGATGCCAATTGAGCATATTCGTAGCCCCTATCATCAAATTAATGTGGATATGGCTGAGAGTGGCGGG
GCAATCGTCAGTTTAAATCGTGATGCTATCGCCAATAAAGACTTTGTATTGACCTGGAAACCGATTCAAGGCAATGAGCC
TACGGCGGCGGTCTTTTCACAAATAGGCAAAACTCATACCTCACAAGCTAGCTCATCAGAAGCGTCAACAGAGCCGCAAA
CTGCGAGTGAGAAATATGGATTGGTGATGTTAATGCCGCCTCAAGGCGCAGAACAACAACCTTCGTCTATTCATCGGGAG
CTGATCTTAGTCATAGATACTTCAGGATCTATGTCGGGAGACGCCATCATTCAGGCTAAGACAGCACTTAAATATGCCTT
AGCCGGGCTTAGACCTACAGACAAGTTCAACATTGTGCAGTTTAACTCAGATGTCGATAAATGGTCTGGAATGGCCATGT
CTGCAACGCCATACAATCTTGCTCAGGCACAAAACTATATCAATCGCCTAGAGGCCAATGGTGGCACTGAGATGTCGATA
GCGATTAATGCGGCGCTAAATATTGAGACTGTGACAGATAAGGAGACTGGGACTGAACTTGATAATAACGACCTAGGTTC
AAATTTATTGCGGCAGGTGCTGTTTATTACCGATGGCGCAGTCTCGAATGAGTCTATGTTGTTTGAGCTGATAGAAGCAC
AGTTAGGCGATAGCCGTTTATTTACTATAGGAATTGGCTCGGCGCCCAATGCTCACTTTATGCAAAGGGCTGCGCAGCTT
GGGCGAGGCACCTATACCTATATCGGCAAGCTAGATGAAGTAAATCAGAAGGTGGTGAGCTTACTCAAGAAGATAGAAAA
GCCTCAAGTGACAGATGTCGACCTTCGTTTTAGCGATGGCAGCGTACCCGATTATTGGCCAGTCCGCATTCCAGACCTTT
ATGCTCATGAGCCGTTACTGGTTGCGGTGAAACTGCCAAGCTATGCCAGTAGCGACCTGTTAGTTCAAGGCCTGTTAGCG
GGTCAGTTTTGGCAACGCCGATTATCGGTGAGTGCTACAGAGCAAGCCAAAGGGTTAGATCTTGTTTGGGCGCGCAAGCA
GATAGCCGCTTTAGAGCTAAGTAAGCAGGCAGCTAATCGAGAACGAATCGAAAAGCAGATCACAGCAATAGCAATGAACT
TTCATATTATGAGTGCCTATACCAGCTTAGTGGCGGTGGACTTAACGCCATCAAAGCCAGAAAGTATTGAGGTAAAACCT
GCCAAGGTGATGCTGCATCTGCCGAGTGGTTGGCAAGCTCTGTCTACATCTCAGTCGTCCATCTTGCCGCAAACGGGGAC
GAACAGTTATGTATTCATTGTTTTTGGATCAGTGTTATTGCTCTTAGCGATTCTTTACCGTCTGTCTTTTAGTCGACTGG
GAATTAGTCGAGTGGGAATTAGTCTAGGTGCTTTCAGGGAACTAGAGTGA

Upstream 100 bases:

>100_bases
TAACGCGACTAACCCGTAAAGCGAACGAGTTAAGCCAACTGACGAGTGGTTAAGCCCGCCGAGAGTATGAACAAAAGTAA
GGACAAAAGAGGAGTAACAG

Downstream 100 bases:

>100_bases
TGGCAAATCAAACAGAGCAGGTCGTTAAATCAAATAAAGATGCAGAGGGTTCTAAAAAGCTCTGCAGAGACTTTAATCGG
TATTTTCCATGGCTATTAGT

Product: cell wall anchor domain-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin; Inter-Alpha-Trypsin Inhibitor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain Protein; Von Willebrand Factor Type A; Cell Wall Anchor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain-Containing Protein; Von Willebrand Factor Type A Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Transmembrane Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Vault Protein Inter-Alpha-Trypsin Domain; Protein ContAining A Von Willebrand Factor Type A Domain; Inter-Alpha-Trypsin Inhibitor Domain Protein; Von Willebrand Factor

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MTRYFSRFSHRQGGPRLGALMAAKTNLKLAMVSMCCLLLPMNAIAMQTTEPFSIDAVKQGSLVFENPQGEIALALPMKTD
VSMQVSGWINRVSVRHEFKNTSTEWVNGQYLFPLPNEAAVDQLRLHIGDRIIEGQIQPKAKAKAIFEQAKSQGKRASLLE
QKRPNIFSAKVANLAPNEMLVVELTYQETLDYRDGEFSLRFPMVVAPRYAPRQAAYPRQKESAHLKESVYLKDSAKALSD
EIDSSVKPAEYAQYYAKKQLSSFDIHDQVSAPERIFDEAPMAEQHNNRVALKVAFDSEMPIEHIRSPYHQINVDMAESGG
AIVSLNRDAIANKDFVLTWKPIQGNEPTAAVFSQIGKTHTSQASSSEASTEPQTASEKYGLVMLMPPQGAEQQPSSIHRE
LILVIDTSGSMSGDAIIQAKTALKYALAGLRPTDKFNIVQFNSDVDKWSGMAMSATPYNLAQAQNYINRLEANGGTEMSI
AINAALNIETVTDKETGTELDNNDLGSNLLRQVLFITDGAVSNESMLFELIEAQLGDSRLFTIGIGSAPNAHFMQRAAQL
GRGTYTYIGKLDEVNQKVVSLLKKIEKPQVTDVDLRFSDGSVPDYWPVRIPDLYAHEPLLVAVKLPSYASSDLLVQGLLA
GQFWQRRLSVSATEQAKGLDLVWARKQIAALELSKQAANRERIEKQITAIAMNFHIMSAYTSLVAVDLTPSKPESIEVKP
AKVMLHLPSGWQALSTSQSSILPQTGTNSYVFIVFGSVLLLLAILYRLSFSRLGISRVGISLGAFRELE

Sequences:

>Translated_789_residues
MTRYFSRFSHRQGGPRLGALMAAKTNLKLAMVSMCCLLLPMNAIAMQTTEPFSIDAVKQGSLVFENPQGEIALALPMKTD
VSMQVSGWINRVSVRHEFKNTSTEWVNGQYLFPLPNEAAVDQLRLHIGDRIIEGQIQPKAKAKAIFEQAKSQGKRASLLE
QKRPNIFSAKVANLAPNEMLVVELTYQETLDYRDGEFSLRFPMVVAPRYAPRQAAYPRQKESAHLKESVYLKDSAKALSD
EIDSSVKPAEYAQYYAKKQLSSFDIHDQVSAPERIFDEAPMAEQHNNRVALKVAFDSEMPIEHIRSPYHQINVDMAESGG
AIVSLNRDAIANKDFVLTWKPIQGNEPTAAVFSQIGKTHTSQASSSEASTEPQTASEKYGLVMLMPPQGAEQQPSSIHRE
LILVIDTSGSMSGDAIIQAKTALKYALAGLRPTDKFNIVQFNSDVDKWSGMAMSATPYNLAQAQNYINRLEANGGTEMSI
AINAALNIETVTDKETGTELDNNDLGSNLLRQVLFITDGAVSNESMLFELIEAQLGDSRLFTIGIGSAPNAHFMQRAAQL
GRGTYTYIGKLDEVNQKVVSLLKKIEKPQVTDVDLRFSDGSVPDYWPVRIPDLYAHEPLLVAVKLPSYASSDLLVQGLLA
GQFWQRRLSVSATEQAKGLDLVWARKQIAALELSKQAANRERIEKQITAIAMNFHIMSAYTSLVAVDLTPSKPESIEVKP
AKVMLHLPSGWQALSTSQSSILPQTGTNSYVFIVFGSVLLLLAILYRLSFSRLGISRVGISLGAFRELE
>Mature_788_residues
TRYFSRFSHRQGGPRLGALMAAKTNLKLAMVSMCCLLLPMNAIAMQTTEPFSIDAVKQGSLVFENPQGEIALALPMKTDV
SMQVSGWINRVSVRHEFKNTSTEWVNGQYLFPLPNEAAVDQLRLHIGDRIIEGQIQPKAKAKAIFEQAKSQGKRASLLEQ
KRPNIFSAKVANLAPNEMLVVELTYQETLDYRDGEFSLRFPMVVAPRYAPRQAAYPRQKESAHLKESVYLKDSAKALSDE
IDSSVKPAEYAQYYAKKQLSSFDIHDQVSAPERIFDEAPMAEQHNNRVALKVAFDSEMPIEHIRSPYHQINVDMAESGGA
IVSLNRDAIANKDFVLTWKPIQGNEPTAAVFSQIGKTHTSQASSSEASTEPQTASEKYGLVMLMPPQGAEQQPSSIHREL
ILVIDTSGSMSGDAIIQAKTALKYALAGLRPTDKFNIVQFNSDVDKWSGMAMSATPYNLAQAQNYINRLEANGGTEMSIA
INAALNIETVTDKETGTELDNNDLGSNLLRQVLFITDGAVSNESMLFELIEAQLGDSRLFTIGIGSAPNAHFMQRAAQLG
RGTYTYIGKLDEVNQKVVSLLKKIEKPQVTDVDLRFSDGSVPDYWPVRIPDLYAHEPLLVAVKLPSYASSDLLVQGLLAG
QFWQRRLSVSATEQAKGLDLVWARKQIAALELSKQAANRERIEKQITAIAMNFHIMSAYTSLVAVDLTPSKPESIEVKPA
KVMLHLPSGWQALSTSQSSILPQTGTNSYVFIVFGSVLLLLAILYRLSFSRLGISRVGISLGAFRELE

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI49355778, Length=335, Percent_Identity=20.8955223880597, Blast_Score=92, Evalue=3e-18,
Organism=Homo sapiens, GI153945780, Length=335, Percent_Identity=20.8955223880597, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI153945711, Length=335, Percent_Identity=20.8955223880597, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI70778918, Length=333, Percent_Identity=23.4234234234234, Blast_Score=91, Evalue=5e-18,
Organism=Homo sapiens, GI38348336, Length=235, Percent_Identity=28.0851063829787, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI261878614, Length=335, Percent_Identity=22.6865671641791, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI156119625, Length=335, Percent_Identity=22.6865671641791, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI261878618, Length=328, Percent_Identity=22.5609756097561, Blast_Score=76, Evalue=2e-13,
Organism=Homo sapiens, GI261878616, Length=328, Percent_Identity=22.5609756097561, Blast_Score=76, Evalue=2e-13,
Organism=Homo sapiens, GI133925809, Length=359, Percent_Identity=22.0055710306407, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI31542984, Length=358, Percent_Identity=22.3463687150838, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI262050538, Length=358, Percent_Identity=22.3463687150838, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI54112397, Length=205, Percent_Identity=26.8292682926829, Blast_Score=73, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87109; Mature: 86977

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYFSRFSHRQGGPRLGALMAAKTNLKLAMVSMCCLLLPMNAIAMQTTEPFSIDAVKQG
CCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHEEECCCCCEEEEEECC
SLVFENPQGEIALALPMKTDVSMQVSGWINRVSVRHEFKNTSTEWVNGQYLFPLPNEAAV
CEEEECCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEECCEEEECCCCHHHH
DQLRLHIGDRIIEGQIQPKAKAKAIFEQAKSQGKRASLLEQKRPNIFSAKVANLAPNEML
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEHHHCCCCCCEE
VVELTYQETLDYRDGEFSLRFPMVVAPRYAPRQAAYPRQKESAHLKESVYLKDSAKALSD
EEEEEHHHHCCCCCCCEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHEEECHHHHHHHH
EIDSSVKPAEYAQYYAKKQLSSFDIHDQVSAPERIFDEAPMAEQHNNRVALKVAFDSEMP
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCC
IEHIRSPYHQINVDMAESGGAIVSLNRDAIANKDFVLTWKPIQGNEPTAAVFSQIGKTHT
HHHHCCCHHEEEEEEECCCCEEEEECCHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
SQASSSEASTEPQTASEKYGLVMLMPPQGAEQQPSSIHRELILVIDTSGSMSGDAIIQAK
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCEEEEEEEECCCCCCCCEEEEHH
TALKYALAGLRPTDKFNIVQFNSDVDKWSGMAMSATPYNLAQAQNYINRLEANGGTEMSI
HHHHHHHHCCCCCCCEEEEEECCCHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEE
AINAALNIETVTDKETGTELDNNDLGSNLLRQVLFITDGAVSNESMLFELIEAQLGDSRL
EEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE
FTIGIGSAPNAHFMQRAAQLGRGTYTYIGKLDEVNQKVVSLLKKIEKPQVTDVDLRFSDG
EEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SVPDYWPVRIPDLYAHEPLLVAVKLPSYASSDLLVQGLLAGQFWQRRLSVSATEQAKGLD
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCE
LVWARKQIAALELSKQAANRERIEKQITAIAMNFHIMSAYTSLVAVDLTPSKPESIEVKP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEE
AKVMLHLPSGWQALSTSQSSILPQTGTNSYVFIVFGSVLLLLAILYRLSFSRLGISRVGI
EEEEEECCCCCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCH
SLGAFRELE
HHCCCCCCC
>Mature Secondary Structure 
TRYFSRFSHRQGGPRLGALMAAKTNLKLAMVSMCCLLLPMNAIAMQTTEPFSIDAVKQG
CHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHEEECCCCCEEEEEECC
SLVFENPQGEIALALPMKTDVSMQVSGWINRVSVRHEFKNTSTEWVNGQYLFPLPNEAAV
CEEEECCCCCEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCEECCEEEECCCCHHHH
DQLRLHIGDRIIEGQIQPKAKAKAIFEQAKSQGKRASLLEQKRPNIFSAKVANLAPNEML
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEHHHCCCCCCEE
VVELTYQETLDYRDGEFSLRFPMVVAPRYAPRQAAYPRQKESAHLKESVYLKDSAKALSD
EEEEEHHHHCCCCCCCEEEEECEEECCCCCCCCCCCCCCHHHHHHHHHEEECHHHHHHHH
EIDSSVKPAEYAQYYAKKQLSSFDIHDQVSAPERIFDEAPMAEQHNNRVALKVAFDSEMP
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCC
IEHIRSPYHQINVDMAESGGAIVSLNRDAIANKDFVLTWKPIQGNEPTAAVFSQIGKTHT
HHHHCCCHHEEEEEEECCCCEEEEECCHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCC
SQASSSEASTEPQTASEKYGLVMLMPPQGAEQQPSSIHRELILVIDTSGSMSGDAIIQAK
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCEEEEEEEECCCCCCCCEEEEHH
TALKYALAGLRPTDKFNIVQFNSDVDKWSGMAMSATPYNLAQAQNYINRLEANGGTEMSI
HHHHHHHHCCCCCCCEEEEEECCCHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEE
AINAALNIETVTDKETGTELDNNDLGSNLLRQVLFITDGAVSNESMLFELIEAQLGDSRL
EEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE
FTIGIGSAPNAHFMQRAAQLGRGTYTYIGKLDEVNQKVVSLLKKIEKPQVTDVDLRFSDG
EEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
SVPDYWPVRIPDLYAHEPLLVAVKLPSYASSDLLVQGLLAGQFWQRRLSVSATEQAKGLD
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCE
LVWARKQIAALELSKQAANRERIEKQITAIAMNFHIMSAYTSLVAVDLTPSKPESIEVKP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEE
AKVMLHLPSGWQALSTSQSSILPQTGTNSYVFIVFGSVLLLLAILYRLSFSRLGISRVGI
EEEEEECCCCCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCH
SLGAFRELE
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA