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The map label for this gene is yiaD [C]

Identifier: 157962338

GI number: 157962338

Start: 3067306

End: 3068055

Strand: Reverse

Name: yiaD [C]

Synonym: Spea_2517

Alternate gene names: 157962338

Gene position: 3068055-3067306 (Counterclockwise)

Preceding gene: 157962343

Following gene: 157962337

Centisome position: 59.29

GC content: 48.8

Gene sequence:

>750_bases
ATGAAAAAGCAACTTATCTCTACTCTAGTTATCGGCGCCTTAATGCTTTCTAATCCGGCCTCTGCAGAGCAAACCGCTGA
GACCGAGCGCAGTCATAACGAAGAATTAATCGGCCTGAGCTCGGGCATTGTTATCGGCGCGGTCGTTGGCGGACCGGTCG
GAGCGATTATTGGTGCATTTACTGGAACCTTACTGGGTAAGTCTGTGGGTGACGATGACGCCTTGCACACCCAGCAAACC
ATGTTATCCGAGCAAGAGCAGCAAGTCGTCGCGTTAAATCAGGAAAATACCTCGCTAGTTGAACTCTCAGATCAATATGA
GCAGGCGCAGCAGCAACTGACGACTCTAAAGATGGCGCAGGAGCAGAAACTAACTGAATTGGCACTGGGGCTCAATGTGC
AATTTAAAACGGGTTCATCGGTTATCGAGCCGCACTTTCAACAACAGCTTAATGATATTGCCTACGCCATGTCGTTATCG
CCTGAGCTAACGCTTGATCTCACCGGCTACGCCGATCGCCGAGGAGATAGTGATTACAACCAAGCTTTGTCTGAGCAGCG
TGTTGCAGAAGTTAAAAATTACCTTACAGAGCAGGGCGTTGAAGAAGAGCGTTTACATAATCAAGCCTTTGGCGACTCTT
CGCCATTGATGGCGGAGCAAAACTTTGAAAATGACTTCTTTGATCGCCGAGTGACACTGAAGCTGCAAAACCAAAACAGT
TCACTGGCTGCTAACGCGACTAACCCGTAA

Upstream 100 bases:

>100_bases
CACTCGGGTTTAATAGCTTCATCGAATAGATACAACTTCTTAAACCAAATTATGGCGATTAATCCCGCCAATGAAATAGC
GACATAAAAGGGAACTACCT

Downstream 100 bases:

>100_bases
AGCGAACGAGTTAAGCCAACTGACGAGTGGTTAAGCCCGCCGAGAGTATGAACAAAAGTAAGGACAAAAGAGGAGTAACA
GATGACTAGGTATTTTTCTA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; OmpA/MotB Domain Protein; OmpA/MotB; OmpA Protein; Outer Membrane Protein OprF; OmpA-Family Protein

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKKQLISTLVIGALMLSNPASAEQTAETERSHNEELIGLSSGIVIGAVVGGPVGAIIGAFTGTLLGKSVGDDDALHTQQT
MLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYAMSLS
PELTLDLTGYADRRGDSDYNQALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPLMAEQNFENDFFDRRVTLKLQNQNS
SLAANATNP

Sequences:

>Translated_249_residues
MKKQLISTLVIGALMLSNPASAEQTAETERSHNEELIGLSSGIVIGAVVGGPVGAIIGAFTGTLLGKSVGDDDALHTQQT
MLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYAMSLS
PELTLDLTGYADRRGDSDYNQALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPLMAEQNFENDFFDRRVTLKLQNQNS
SLAANATNP
>Mature_249_residues
MKKQLISTLVIGALMLSNPASAEQTAETERSHNEELIGLSSGIVIGAVVGGPVGAIIGAFTGTLLGKSVGDDDALHTQQT
MLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYAMSLS
PELTLDLTGYADRRGDSDYNQALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPLMAEQNFENDFFDRRVTLKLQNQNS
SLAANATNP

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994946, Length=237, Percent_Identity=25.3164556962025, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27174; Mature: 27174

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQLISTLVIGALMLSNPASAEQTAETERSHNEELIGLSSGIVIGAVVGGPVGAIIGAF
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHH
TGTLLGKSVGDDDALHTQQTMLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHH
EQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYAMSLSPELTLDLTGYADRRGDSDYN
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH
QALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPLMAEQNFENDFFDRRVTLKLQNQNS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEEEEEECCCC
SLAANATNP
CEECCCCCC
>Mature Secondary Structure
MKKQLISTLVIGALMLSNPASAEQTAETERSHNEELIGLSSGIVIGAVVGGPVGAIIGAF
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHH
TGTLLGKSVGDDDALHTQQTMLSEQEQQVVALNQENTSLVELSDQYEQAQQQLTTLKMAQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHH
EQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYAMSLSPELTLDLTGYADRRGDSDYN
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH
QALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPLMAEQNFENDFFDRRVTLKLQNQNS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHCCEEEEEEECCCC
SLAANATNP
CEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA