Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yceF [C]
Identifier: 157962321
GI number: 157962321
Start: 3045122
End: 3045703
Strand: Direct
Name: yceF [C]
Synonym: Spea_2500
Alternate gene names: 157962321
Gene position: 3045122-3045703 (Clockwise)
Preceding gene: 157962309
Following gene: 157962322
Centisome position: 58.85
GC content: 44.67
Gene sequence:
>582_bases ATGTCCGCACCTATCGTTTTAGCTTCAACTTCGACTTTTAGACAGCAACTCCTTAAAAAACTTGAATTGGAGTTTTGCTG CTGCTCACCAGATGTAGATGAGACACCAGTTGATAATGAGTCCCCTATCGAACTGGTTTTACGATTAGCGAAACTTAAGG CTGAGGCAGGAACAAAGCTCCACCCTAACGCGATTGTTATTGGTTCAGATCAAGTCGCTGTAATAAACAACCAGATCATT GGTAAACCACTCAACCGTGAAACAGCCATCGCACAGTTAACTGCGGCCAGTGGTCAAGCTATTACCTTTTACACAGGCCT TGCCGTTCATAATGCCAAGACAGGCTCTGTTGATGCTATTGTAGAGCCCTTTACCGTCCACTTTCGCTCATTAACTTCAA AGCAAATCAGTAATTATGTCGACATCGAGCAGCCTTTTTACTGCGCAGGCAGCTTTAAGAGCGAAGGCCTTGGTATCGCC TTATTTGAAAGGTTAGAAGGTAAAGATCCAAACACACTGATCGGCCTGCCGCTGATTTCTCTCATCGATCTGCTAGCAGA TCAAGGCATCCATGTTCTGTAA
Upstream 100 bases:
>100_bases AGACTTGCTACACTGCGGGAACTTTAGTGACAATACACTATTTGTTACTAGCGAATTTAACTGGCGTTTTAGTAGTTCGC GCATATTACAAGGCCTCATT
Downstream 100 bases:
>100_bases AACCAACCACGTTGATTCAGAGTAAATAAAAAGCAAATTTAGCCCTGCTCTACTAAAATTAGTGCTAGTAAATTAATCTT GCTCGTTAGCAAGCTTAATT
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSAPIVLASTSTFRQQLLKKLELEFCCCSPDVDETPVDNESPIELVLRLAKLKAEAGTKLHPNAIVIGSDQVAVINNQII GKPLNRETAIAQLTAASGQAITFYTGLAVHNAKTGSVDAIVEPFTVHFRSLTSKQISNYVDIEQPFYCAGSFKSEGLGIA LFERLEGKDPNTLIGLPLISLIDLLADQGIHVL
Sequences:
>Translated_193_residues MSAPIVLASTSTFRQQLLKKLELEFCCCSPDVDETPVDNESPIELVLRLAKLKAEAGTKLHPNAIVIGSDQVAVINNQII GKPLNRETAIAQLTAASGQAITFYTGLAVHNAKTGSVDAIVEPFTVHFRSLTSKQISNYVDIEQPFYCAGSFKSEGLGIA LFERLEGKDPNTLIGLPLISLIDLLADQGIHVL >Mature_192_residues SAPIVLASTSTFRQQLLKKLELEFCCCSPDVDETPVDNESPIELVLRLAKLKAEAGTKLHPNAIVIGSDQVAVINNQIIG KPLNRETAIAQLTAASGQAITFYTGLAVHNAKTGSVDAIVEPFTVHFRSLTSKQISNYVDIEQPFYCAGSFKSEGLGIAL FERLEGKDPNTLIGLPLISLIDLLADQGIHVL
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=185, Percent_Identity=56.2162162162162, Blast_Score=221, Evalue=2e-59, Organism=Escherichia coli, GI1789646, Length=184, Percent_Identity=31.5217391304348, Blast_Score=86, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202443, Length=195, Percent_Identity=31.7948717948718, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI78706856, Length=185, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 20787; Mature: 20656
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPIVLASTSTFRQQLLKKLELEFCCCSPDVDETPVDNESPIELVLRLAKLKAEAGTKL CCCCEEEECCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE HPNAIVIGSDQVAVINNQIIGKPLNRETAIAQLTAASGQAITFYTGLAVHNAKTGSVDAI CCCEEEECCCCEEEECCEECCCCCCCHHHHHEEECCCCCEEEEEEEEEEECCCCCCHHHH VEPFTVHFRSLTSKQISNYVDIEQPFYCAGSFKSEGLGIALFERLEGKDPNTLIGLPLIS HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHH LIDLLADQGIHVL HHHHHHCCCCCCC >Mature Secondary Structure SAPIVLASTSTFRQQLLKKLELEFCCCSPDVDETPVDNESPIELVLRLAKLKAEAGTKL CCCEEEECCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE HPNAIVIGSDQVAVINNQIIGKPLNRETAIAQLTAASGQAITFYTGLAVHNAKTGSVDAI CCCEEEECCCCEEEECCEECCCCCCCHHHHHEEECCCCCEEEEEEEEEEECCCCCCHHHH VEPFTVHFRSLTSKQISNYVDIEQPFYCAGSFKSEGLGIALFERLEGKDPNTLIGLPLIS HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHH LIDLLADQGIHVL HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]