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The map label for this gene is 157962171

Identifier: 157962171

GI number: 157962171

Start: 2862562

End: 2863164

Strand: Direct

Name: 157962171

Synonym: Spea_2350

Alternate gene names: NA

Gene position: 2862562-2863164 (Clockwise)

Preceding gene: 157962170

Following gene: 157962173

Centisome position: 55.32

GC content: 44.78

Gene sequence:

>603_bases
ATGCTAAAACTCAAATTAGGGGCTAATAGCCCCTATGGGGTCGCGCTGGTCATCACCCTAGTTTGTGTCTGTTTTTTTTA
TTTGCAACTTGACGCTTTACTGGCCTATCAGCGAGTGCTCATCCTCGATGGACAGTGGTGGAGGTTACTAACCGGTAATT
TACTGCACACTAATGCATGGCACCTATATATGAACTTAGCGGGTTTATGGGTGATATTAGCGCTACATGAGCAACACTAC
CAAGCCAAAGGGTTTAGTGTGCTCTTCTTCATACTATGCCTTATGCAAGGGATCGGCTTACTGGTGTTTTATCCAAGTCT
TATCGGTTATGTCGGTTTAAGCGGCATGCTGCATGGACTCTTTACATATGGCGCGGTGTTGGATATTCGCAATGGATTAA
AATCAGGTTACCTACTGCTATTAGGGGTATTCCTAAAAGTCGCCTACGAGCAATACTTTGGTGCAAGCATTGAGATGACT
CAGCTCATCGACGCCAGAGTGGCAACTGAAGCCCATTTAGTGGGACTTATCAGTGGGCTTAGCTGTGTCGGCTCAATTTT
AGCTTTCAAACATTTTCGAGCCAAAACTCGTCCTCAGAAATAA

Upstream 100 bases:

>100_bases
GTGATGGTTGCGGTACCTGCCCAGCCTGCCTATTAAGAAAGCGTGGGCTTGAAGAGTACCTAGCCGATAAAGAGGCGATA
CAAGCAAGACTTACGGCTAA

Downstream 100 bases:

>100_bases
GTGATTCATGGTTAATAATCAAAAAGGAGAGCAAGTTTAACTGGCTCTCCTTTTTTAATTAATGATTTTAATTAAAAGCT
TATTATCACTAAGCCTTTAT

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Rhomboid Protein; Rhomboid-Like Protein; Peptidase; Rhomboid Family Membrane Protein; Rhomboid Family Integral Membrane Protein

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLKLKLGANSPYGVALVITLVCVCFFYLQLDALLAYQRVLILDGQWWRLLTGNLLHTNAWHLYMNLAGLWVILALHEQHY
QAKGFSVLFFILCLMQGIGLLVFYPSLIGYVGLSGMLHGLFTYGAVLDIRNGLKSGYLLLLGVFLKVAYEQYFGASIEMT
QLIDARVATEAHLVGLISGLSCVGSILAFKHFRAKTRPQK

Sequences:

>Translated_200_residues
MLKLKLGANSPYGVALVITLVCVCFFYLQLDALLAYQRVLILDGQWWRLLTGNLLHTNAWHLYMNLAGLWVILALHEQHY
QAKGFSVLFFILCLMQGIGLLVFYPSLIGYVGLSGMLHGLFTYGAVLDIRNGLKSGYLLLLGVFLKVAYEQYFGASIEMT
QLIDARVATEAHLVGLISGLSCVGSILAFKHFRAKTRPQK
>Mature_200_residues
MLKLKLGANSPYGVALVITLVCVCFFYLQLDALLAYQRVLILDGQWWRLLTGNLLHTNAWHLYMNLAGLWVILALHEQHY
QAKGFSVLFFILCLMQGIGLLVFYPSLIGYVGLSGMLHGLFTYGAVLDIRNGLKSGYLLLLGVFLKVAYEQYFGASIEMT
QLIDARVATEAHLVGLISGLSCVGSILAFKHFRAKTRPQK

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22301; Mature: 22301

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLKLGANSPYGVALVITLVCVCFFYLQLDALLAYQRVLILDGQWWRLLTGNLLHTNAW
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHCCHH
HLYMNLAGLWVILALHEQHYQAKGFSVLFFILCLMQGIGLLVFYPSLIGYVGLSGMLHGL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTYGAVLDIRNGLKSGYLLLLGVFLKVAYEQYFGASIEMTQLIDARVATEAHLVGLISGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SCVGSILAFKHFRAKTRPQK
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKLKLGANSPYGVALVITLVCVCFFYLQLDALLAYQRVLILDGQWWRLLTGNLLHTNAW
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHCCHH
HLYMNLAGLWVILALHEQHYQAKGFSVLFFILCLMQGIGLLVFYPSLIGYVGLSGMLHGL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTYGAVLDIRNGLKSGYLLLLGVFLKVAYEQYFGASIEMTQLIDARVATEAHLVGLISGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SCVGSILAFKHFRAKTRPQK
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA