Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is yfiQ [H]
Identifier: 157962145
GI number: 157962145
Start: 2830886
End: 2833582
Strand: Direct
Name: yfiQ [H]
Synonym: Spea_2324
Alternate gene names: 157962145
Gene position: 2830886-2833582 (Clockwise)
Preceding gene: 157962129
Following gene: 157962150
Centisome position: 54.71
GC content: 47.5
Gene sequence:
>2697_bases ATGAGCCAACGCACTCTTCATACACTCTTCAAACCTAAATCAGTGGCCATTATTGGCGCCTCAAATAAACCCAAACGAGC CGGTAATGTCTTGATGAAGAACTTGCTCTCCGGTGGTTTCTCGGGACCTATCATGCCGGTGACCCCAAAATATGAAGCGG TGATGGGGGTGTTAGCTTATCCCAACATTCAGGCTCTGCCACTTATTCCCGATCTTGCCATTATCTGCACCACCGCAAGC AGCGTACCTAGCATCATTGAAACTTTGGCTCAATTTGGCTGTAAGGTCGCCATTGTTATGGCCTCTGGTATGGCCGATGA ATTTAACGAGGAAGGTGTCAGCCTATTAAGTCAGATGCAGCAATTTGCCGATAGGTATGGCATGCGGATTTTGGGCCCCA ATAGTTTGGGGATGATATTGCCAAACTTAGGCTTAAACGCCAGCCTTGCTCACACCAGTGCCCTGCCAGGCAAGATAGCA TTCGTATCGCAATCAGCGGCTATCTGCACCACGGTACTAGACTGGGCAAATAACAAAGGCATTGGTTTCTCCTCTTTTAT CTCTCTCGGTGATGCCAACGATATTAACTTTGATGAGCTTTTGGATTACTTGGGAAGAGATTCCAAAACCGATGCCATTT TGCTCTATATCGACTCGATTAACGAAAAGCGTCACTTCTTGTCTGCGGCGCGGGCGGCGTCACGTAATAAACCCATATTA GTGATTAAGTCTGGCCGAAGTATTGAGGGCGGCAACGCCGCTCAGTTACACACTGGTGGCGTGTCTGGAAACGATGCTGT TTATGAAGCCGCCTTCAGACGTGCAGGTATGCTCAGGGTTAACGATCTTATCGAGCTCTTTGCCGCAGTAGAAACCTTAG CCCACTCACGGCCTTTGCAAGGCGAGCGTCTTGGGATCATCAGTAATGGTGGTGGCCCTGCCGTTTTGGCATTGGATGAA CTGATTTTAGGCGGAGGCAAATTACCATCACTGTCCCCCGAGATCTATCAGCGTCTGGATGCATTACTTCCTAAAAGCTG GTCTCGCCAGAATCCGATTGATATCGGAGGTGATTCAGATGCAAACCGTTATGCTAAATCTCTTGAGATCTTAATGGACA GTGACGATCTCGATGCGATCTTAATTTTGCACTCACCCTCAGCGTTAGGTGAAAGTGTCGGGGTCGCCGAAGCCATTGCA GATACTATTGCTAAGCACCCCAATCGGCACAAAATCAATATTCTTACCAACTGGAGCGGCGAAGACTCAGCCTATGAGGC CCGTAAGCATTTCTCAAAGTCTCGCATTCCGACCTATCGCACACCAGAGGGTGCCGTTGGGGCCTTTATGCATATGGTTG AGTACCGTCGTAACCAAAAGCTACTGCAAGAAGTGCCGCAATCCATTCCTGATAATATTCCTGCCGATTCCACATTGGCC CGTGAAAAGTTACAACAGGCGTTAGACCAAGGTAAAACCGTTTTAGAAACCCATGAATCACGTGCAATTTTAAGTGCCTA TGGACTTAACACTATCGATACCTGGTTTGCGACAACTGCAGAGCAAGCCGTTGAGTTTGCCAAGCTGGCTGGTTACCCTA TTGCGTTAAAGCTGCAGTCACCGGATATTCACTATAAATCTGACATACAAGGTGTGATGCTGAATCTCACTTCCGATCTA GAAGTTGAACATGCAGCCAATGCCATGATTGAAAGGGTGATCTCAGTTAATCCCGATGCTCGGATTGAGGGACTCATAGT GCAGAAAATGGCGCTCACCGCCGGTGCGCAGGAGATAAGAGTCGCGGTTGCTAATGATCCTGTTTTTGGTCCGGCAATTT TGCTAGGTGAAGGCGGCTCGGAATGGGAACCCACTAAAGATGCGGTCGTTGCCCTTCCCCCTCTTAATATGACGCTGGCG CGTTATATGGTGATCCAAGCCCTCAAAACCCAAAAGCTCAGGGATAGGCATTTGCCACTAGGGCTAAATATGCATGCACT TTGCGTCATGCTGACCCAGATCTCACACTTAATTATTGACTGCCCTGAAATCGCCACTCTCGACTTAAACCCCGTGTTGT GCGCAGGTGAGCAGATCACTCTACTCGATGTTAATATCGGTCTACAGCAAGAACCGGTTGATAACGCTTCGAGGCTGGCA ATCTCTCCTTATCCAAAAGAACTCGAAGAGATGGTTACCCTTAAGAATGGCAATAAGGTCATGCTACGGCCAATTTTGCC AGAAGATGAGCCTAAACATCTGGCTTTTGATAACTCCCTTTCTGATGAGGATAGATACAAGCGCTACTTTGGGGTTCGCT CTAAGATGACCCATGAAGAGATGGCGGTATTAACTCAAATTGATTACGCCAGAGAGATGGCCTTTATCGCAACAGCGATT GGCGAGGATGGAGAAGAAACCACGTTAGGCGCCATACGAGCCTCTATCGATCCCGATAATACTGAGGCTGAATTTGCGAT GGCTGTTCGCAGTAATTACCAGGGCCAAGGTTTAGGTAAACTGTTGCTTGAGAAACTAGTCAAGTATTACAAAGACAATG ACACCTTAGTCCTCACTGGTTTTACCATGTTTGAAAATAGAAACATGGCGAGCCTAGCAAAGCGTTTAGGCTTTAGCGTA ACCTTCGATATGGAAGATCGATTGATTAACATGCATATGGACTTAAAAGCTGACTAA
Upstream 100 bases:
>100_bases ACACTTATCGCCCTCATAGGCGTTAATTTCGACCATTCACCTATGGTAAAACGTTCCTGCTCATGTACACTCATAACATA CTGACTTGTAGGATAAGTTC
Downstream 100 bases:
>100_bases GCCTTTCTCAAGCGTAAAAAAGCCATTAAGACAGATTCTTAATGGCTCTATTTATTTAAGTGCTTGCTCAAGTGCATAAT CAAGTGAGCTTATGACGAGT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 898; Mature: 897
Protein sequence:
>898_residues MSQRTLHTLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTAS SVPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIA FVSQSAAICTTVLDWANNKGIGFSSFISLGDANDINFDELLDYLGRDSKTDAILLYIDSINEKRHFLSAARAASRNKPIL VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDE LILGGGKLPSLSPEIYQRLDALLPKSWSRQNPIDIGGDSDANRYAKSLEILMDSDDLDAILILHSPSALGESVGVAEAIA DTIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDL EVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLA RYMVIQALKTQKLRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHLAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAI GEDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFSV TFDMEDRLINMHMDLKAD
Sequences:
>Translated_898_residues MSQRTLHTLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTAS SVPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIA FVSQSAAICTTVLDWANNKGIGFSSFISLGDANDINFDELLDYLGRDSKTDAILLYIDSINEKRHFLSAARAASRNKPIL VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDE LILGGGKLPSLSPEIYQRLDALLPKSWSRQNPIDIGGDSDANRYAKSLEILMDSDDLDAILILHSPSALGESVGVAEAIA DTIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDL EVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLA RYMVIQALKTQKLRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHLAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAI GEDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFSV TFDMEDRLINMHMDLKAD >Mature_897_residues SQRTLHTLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTASS VPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAF VSQSAAICTTVLDWANNKGIGFSSFISLGDANDINFDELLDYLGRDSKTDAILLYIDSINEKRHFLSAARAASRNKPILV IKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDEL ILGGGKLPSLSPEIYQRLDALLPKSWSRQNPIDIGGDSDANRYAKSLEILMDSDDLDAILILHSPSALGESVGVAEAIAD TIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLAR EKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDLE VEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLAR YMVIQALKTQKLRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLAI SPYPKELEEMVTLKNGNKVMLRPILPEDEPKHLAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAIG EDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFSVT FDMEDRLINMHMDLKAD
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=895, Percent_Identity=51.3966480446927, Blast_Score=911, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 97878; Mature: 97746
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRTLHTLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAY CCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC PNIQALPLIPDLAIICTTASSVPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQ CCCCEECCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH QFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKG HHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC IGFSSFISLGDANDINFDELLDYLGRDSKTDAILLYIDSINEKRHFLSAARAASRNKPIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQ EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GERLGIISNGGGPAVLALDELILGGGKLPSLSPEIYQRLDALLPKSWSRQNPIDIGGDSD CCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC ANRYAKSLEILMDSDDLDAILILHSPSALGESVGVAEAIADTIAKHPNRHKINILTNWSG HHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC EDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQS HHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC PDIHYKSDIQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIR CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE VAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLARYMVIQALKTQKLRDRHLPL EEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC GLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCCCCCEE ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHLAFDNSLSDEDRYKRYFGVRSKMTHEE ECCCHHHHHHHHEECCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH MAVLTQIDYAREMAFIATAIGEDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGK HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHEEECCCCCCCHHHHHHHHHCCCCCCCHHH LLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFSVTFDMEDRLINMHMDLKAD HHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEEEEECC >Mature Secondary Structure SQRTLHTLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAY CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC PNIQALPLIPDLAIICTTASSVPSIIETLAQFGCKVAIVMASGMADEFNEEGVSLLSQMQ CCCCEECCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH QFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKG HHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC IGFSSFISLGDANDINFDELLDYLGRDSKTDAILLYIDSINEKRHFLSAARAASRNKPIL CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQ EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GERLGIISNGGGPAVLALDELILGGGKLPSLSPEIYQRLDALLPKSWSRQNPIDIGGDSD CCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC ANRYAKSLEILMDSDDLDAILILHSPSALGESVGVAEAIADTIAKHPNRHKINILTNWSG HHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC EDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQS HHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC PDIHYKSDIQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIR CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE VAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLARYMVIQALKTQKLRDRHLPL EEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC GLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCCCCCEE ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHLAFDNSLSDEDRYKRYFGVRSKMTHEE ECCCHHHHHHHHEECCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHH MAVLTQIDYAREMAFIATAIGEDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGK HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHEEECCCCCCCHHHHHHHHHCCCCCCCHHH LLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFSVTFDMEDRLINMHMDLKAD HHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]