Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is apr [H]
Identifier: 157962121
GI number: 157962121
Start: 2792348
End: 2794168
Strand: Direct
Name: apr [H]
Synonym: Spea_2300
Alternate gene names: 157962121
Gene position: 2792348-2794168 (Clockwise)
Preceding gene: 157962120
Following gene: 157962123
Centisome position: 53.96
GC content: 48.87
Gene sequence:
>1821_bases ATGAGAAAAACAACTAAAACCCTTATCGCCCTGAGTATAGGCTTGTCCTTTGCAACTCAGGCAGCGGATCAACGCTATAT CATCCAAGTTGATGAGGGACACAAGGGATTAGTCAAAGCCCTAGCTAAAAAGGTAGGTGGCGAGCTTAACGTAGACGGCA GCGGCTTTATCGCAGCAACATTTTCAGGCAAAGACCTCAGCACAGTTAAAGGCTTGCTCAATAATCCACATGTTAAGCTT GTAGAAGAAGATCAACGCCGCGTACCGCTGTCGCTATACAGCGATGACATTGGCGATCCATCCGTCACACAGCTAACACC CTATGCAGTCTATCAATCACAAGCTGACCAACTCACATTAAACCCCAGTGCAGGCACTAAGGTGTGTGTAATTGATTCAG GGCTGGATCAATCTAATCCCGATTTTGTATGGTCATCTATTACAGGTGACAGTGACTCGGGCACCGGCAACTGGTATGAA CATGGTGGCCCCCATGGCACCCACGTAGCCGGAACCATAGGCGCAGCTGACAATGACTTTGGCGTGATTGGCATGGCGCC AGGTGTCGATATGCATATCATTAAAGTCTTTAATGCCAGTGGCTGGGGTTATTCATCAGATTTAGCCCACGCCGCTAGCC TTTGTAGCGCAGCAGGCGCGAACATTATTAGCATGAGTCTAGGTGGCGGCTCGCCAAATACCACCGAAGAGAACGCCTTT AAATCCTTCACCTCTGACGGTGGCTTAGTCATCGCGGCTGCAGGTAACAGCGGTAATAATGTGCGAACTTACCCAGCAGG CTATACCTCGGTGATGATGGTAGGCGCAAATGATGCTGACAATAATATTGCCGTATTCTCACAATTCCCCGCCTGCTCAA CCTTTTCTACCGGCAAAGGCAAAAAAAGCAAAACTGAGATTATTGACGGCAGTTGCGTAGAGATCACCGCTGGCGGCGTG AGTACCCTATCGACATACCCTCAAGGCATGGCGGTTAATTCCAACCTTGAAGCAGACGGACAAAGCATCGCCTCTTCGGC AATGGAGAACGCCGGTATCGTAACAGCCGAGTCGTACTTTATGGGAACAGCCGAGGCAATAGATGCAAGCGCTAATGGTA AAGTTTGTCTTATCGATCGAGGCGTTATCTCATTCCACGATAAGGTTAAAAACTGTGAAGCTTCAGGCGGTTTAGGCGCT GTTATCGTTAACAATGTCGATGGCATGCTATATGGAACATTGGGGGATGCCAATATCACTGAAATTCCAGCCGTAGGAGC CGCATTAGCCGATAGAGGCGCTTTACATGCCGCAACACAGATGACAGTTAAAATTGCCGCCAGCGACTATGGTTTCATGA GCGGAACTTCAATGGCGACCCCAGCGGTCTCAGGATTAGCAGCGCTGTTATGGTCAAACCATAGCGGTTGTACTGGTACA GATATCCGAGAGGCGCTAAAGGCCTCTGCATTTGACGCTGGAGAATCGGGCCGCGACGATTACTTTGGCTACGGTATCGC CAAGGTCGCCGACGCCAGTGCTTATCTCGATAACATGGGTTGTAACACCACTGAGCCGTTAGAAGATATCGAGCTCAGCG CGACAACATCATTTTCAAAGGGTAAGGATAGAGTGAGCTTAACTTGGTCTGGCGCTAGCAGCAGTCGAGTCGATGTTTAT CGTAACGGCCTTATCCAAACCACAACAAGTAATGACGGCAGCCACGAAGATACATTAAGAAATGCTTACGGCATTTACAC TTACAGTGTTTGTAATGCAGGTACCAACCATTGCTCTAGCAATGTCAGCGTCAACTTTTAA
Upstream 100 bases:
>100_bases ATGGCAGTCGCTTTATTTCAAATGCCCAGTTTTTTGAAGCTTATCAGCAATATTCAAATAGACATATTTAATAAGAATCA TAAATAAATGGAGTGTATTA
Downstream 100 bases:
>100_bases TTTATTTGATTGATTGATGCTTGTTAGTCGCAAACAATCAACAAAAATAGCCTAAAAAGCCGCATTCGCGGCTTTTTTAA TTAATGTGCTTATCAACTCT
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MRKTTKTLIALSIGLSFATQAADQRYIIQVDEGHKGLVKALAKKVGGELNVDGSGFIAATFSGKDLSTVKGLLNNPHVKL VEEDQRRVPLSLYSDDIGDPSVTQLTPYAVYQSQADQLTLNPSAGTKVCVIDSGLDQSNPDFVWSSITGDSDSGTGNWYE HGGPHGTHVAGTIGAADNDFGVIGMAPGVDMHIIKVFNASGWGYSSDLAHAASLCSAAGANIISMSLGGGSPNTTEENAF KSFTSDGGLVIAAAGNSGNNVRTYPAGYTSVMMVGANDADNNIAVFSQFPACSTFSTGKGKKSKTEIIDGSCVEITAGGV STLSTYPQGMAVNSNLEADGQSIASSAMENAGIVTAESYFMGTAEAIDASANGKVCLIDRGVISFHDKVKNCEASGGLGA VIVNNVDGMLYGTLGDANITEIPAVGAALADRGALHAATQMTVKIAASDYGFMSGTSMATPAVSGLAALLWSNHSGCTGT DIREALKASAFDAGESGRDDYFGYGIAKVADASAYLDNMGCNTTEPLEDIELSATTSFSKGKDRVSLTWSGASSSRVDVY RNGLIQTTTSNDGSHEDTLRNAYGIYTYSVCNAGTNHCSSNVSVNF
Sequences:
>Translated_606_residues MRKTTKTLIALSIGLSFATQAADQRYIIQVDEGHKGLVKALAKKVGGELNVDGSGFIAATFSGKDLSTVKGLLNNPHVKL VEEDQRRVPLSLYSDDIGDPSVTQLTPYAVYQSQADQLTLNPSAGTKVCVIDSGLDQSNPDFVWSSITGDSDSGTGNWYE HGGPHGTHVAGTIGAADNDFGVIGMAPGVDMHIIKVFNASGWGYSSDLAHAASLCSAAGANIISMSLGGGSPNTTEENAF KSFTSDGGLVIAAAGNSGNNVRTYPAGYTSVMMVGANDADNNIAVFSQFPACSTFSTGKGKKSKTEIIDGSCVEITAGGV STLSTYPQGMAVNSNLEADGQSIASSAMENAGIVTAESYFMGTAEAIDASANGKVCLIDRGVISFHDKVKNCEASGGLGA VIVNNVDGMLYGTLGDANITEIPAVGAALADRGALHAATQMTVKIAASDYGFMSGTSMATPAVSGLAALLWSNHSGCTGT DIREALKASAFDAGESGRDDYFGYGIAKVADASAYLDNMGCNTTEPLEDIELSATTSFSKGKDRVSLTWSGASSSRVDVY RNGLIQTTTSNDGSHEDTLRNAYGIYTYSVCNAGTNHCSSNVSVNF >Mature_606_residues MRKTTKTLIALSIGLSFATQAADQRYIIQVDEGHKGLVKALAKKVGGELNVDGSGFIAATFSGKDLSTVKGLLNNPHVKL VEEDQRRVPLSLYSDDIGDPSVTQLTPYAVYQSQADQLTLNPSAGTKVCVIDSGLDQSNPDFVWSSITGDSDSGTGNWYE HGGPHGTHVAGTIGAADNDFGVIGMAPGVDMHIIKVFNASGWGYSSDLAHAASLCSAAGANIISMSLGGGSPNTTEENAF KSFTSDGGLVIAAAGNSGNNVRTYPAGYTSVMMVGANDADNNIAVFSQFPACSTFSTGKGKKSKTEIIDGSCVEITAGGV STLSTYPQGMAVNSNLEADGQSIASSAMENAGIVTAESYFMGTAEAIDASANGKVCLIDRGVISFHDKVKNCEASGGLGA VIVNNVDGMLYGTLGDANITEIPAVGAALADRGALHAATQMTVKIAASDYGFMSGTSMATPAVSGLAALLWSNHSGCTGT DIREALKASAFDAGESGRDDYFGYGIAKVADASAYLDNMGCNTTEPLEDIELSATTSFSKGKDRVSLTWSGASSSRVDVY RNGLIQTTTSNDGSHEDTLRNAYGIYTYSVCNAGTNHCSSNVSVNF
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 62559; Mature: 62559
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTTKTLIALSIGLSFATQAADQRYIIQVDEGHKGLVKALAKKVGGELNVDGSGFIAAT CCCHHHEEEEEECCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCEEEEE FSGKDLSTVKGLLNNPHVKLVEEDQRRVPLSLYSDDIGDPSVTQLTPYAVYQSQADQLTL ECCCCHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHEECCHHHCCCCCCEEEE NPSAGTKVCVIDSGLDQSNPDFVWSSITGDSDSGTGNWYEHGGPHGTHVAGTIGAADNDF CCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCC GVIGMAPGVDMHIIKVFNASGWGYSSDLAHAASLCSAAGANIISMSLGGGSPNTTEENAF EEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH KSFTSDGGLVIAAAGNSGNNVRTYPAGYTSVMMVGANDADNNIAVFSQFPACSTFSTGKG HHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC KKSKTEIIDGSCVEITAGGVSTLSTYPQGMAVNSNLEADGQSIASSAMENAGIVTAESYF CCCCCEEECCCEEEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEHHHH MGTAEAIDASANGKVCLIDRGVISFHDKVKNCEASGGLGAVIVNNVDGMLYGTLGDANIT CCCHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCC EIPAVGAALADRGALHAATQMTVKIAASDYGFMSGTSMATPAVSGLAALLWSNHSGCTGT CCCCHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH DIREALKASAFDAGESGRDDYFGYGIAKVADASAYLDNMGCNTTEPLEDIELSATTSFSK HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCC GKDRVSLTWSGASSSRVDVYRNGLIQTTTSNDGSHEDTLRNAYGIYTYSVCNAGTNHCSS CCCEEEEEECCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCC NVSVNF CCEEEC >Mature Secondary Structure MRKTTKTLIALSIGLSFATQAADQRYIIQVDEGHKGLVKALAKKVGGELNVDGSGFIAAT CCCHHHEEEEEECCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCCCEEEEE FSGKDLSTVKGLLNNPHVKLVEEDQRRVPLSLYSDDIGDPSVTQLTPYAVYQSQADQLTL ECCCCHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHEECCHHHCCCCCCEEEE NPSAGTKVCVIDSGLDQSNPDFVWSSITGDSDSGTGNWYEHGGPHGTHVAGTIGAADNDF CCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCC GVIGMAPGVDMHIIKVFNASGWGYSSDLAHAASLCSAAGANIISMSLGGGSPNTTEENAF EEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH KSFTSDGGLVIAAAGNSGNNVRTYPAGYTSVMMVGANDADNNIAVFSQFPACSTFSTGKG HHHCCCCCEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC KKSKTEIIDGSCVEITAGGVSTLSTYPQGMAVNSNLEADGQSIASSAMENAGIVTAESYF CCCCCEEECCCEEEEECCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEHHHH MGTAEAIDASANGKVCLIDRGVISFHDKVKNCEASGGLGAVIVNNVDGMLYGTLGDANIT CCCHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCC EIPAVGAALADRGALHAATQMTVKIAASDYGFMSGTSMATPAVSGLAALLWSNHSGCTGT CCCCHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH DIREALKASAFDAGESGRDDYFGYGIAKVADASAYLDNMGCNTTEPLEDIELSATTSFSK HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCEEEEECCCCC GKDRVSLTWSGASSSRVDVYRNGLIQTTTSNDGSHEDTLRNAYGIYTYSVCNAGTNHCSS CCCEEEEEECCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCC NVSVNF CCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6420308; 9826175 [H]