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The map label for this gene is ybiT [H]

Identifier: 157962109

GI number: 157962109

Start: 2771705

End: 2773315

Strand: Direct

Name: ybiT [H]

Synonym: Spea_2288

Alternate gene names: 157962109

Gene position: 2771705-2773315 (Clockwise)

Preceding gene: 157962108

Following gene: 157962114

Centisome position: 53.56

GC content: 44.69

Gene sequence:

>1611_bases
TTGATTTCTACCGCAAATATTACGATGCAGTTTGGCCCAGAGCCATTATTCGAAAACATTTCCGCTAAGTTCGGTAACGG
CAATCGCTACGGCTTAATCGGCGCAAATGGTTGTGGTAAATCCACCTTTATGAAGATCCTCAGTGGCGAGCTTGCACCGA
CCTCAGGTAACGTTTCAATTACCCCAGGTCAAAAAGTCGGTACTTTGAGCCAGAACCAATTCGCATTTGAAGAATTCAGC
GTTATCGACGCGGTAATTCAAGGCGATGCTAAACTGTGGGAAATCAAGCAAGAACGTGAGCGCATCTATTCACTGCCAGA
AATGAGTGAAGAAGACGGTATGAAAGTGGGCGAGCTTGAAAGTGAGTTTGCTGAAATGGACGGTTACAGCGCTGAAAGCC
GTGCCGGTGAAATCCTACTTGAAGCGGGTATCGAAGAAGAGTTTCATTTCGGCCTAATGAGCCAAGTTGCGCCAGGTTTT
AAATTGCGCGTGCTATTAGCACAGGCATTGTTCTCAAATCCAGATATCTTGCTACTGGACGAACCAACCAACAACTTGGA
TATTCACACCATTAACTGGTTGGCTGAAGAGCTAAACAAACGTAAGTGCACCATGATCATCATTTCGCATGATAGACACT
TCTTGAACACTGTTTGTACTCATATGGCCGATATCGATTACGGCGAGCTACGTATTTACCCAGGTAACTACGAGTACTTC
ATGGAAGCGTCTTCACTTATTCAAGAGCAATTGCTTGCGGGTAACGCCAAGAAAAGTGCTGAAATGACCGAACTTCAAGA
CTTCGTTAACCGTTTCGGTGCTAACGCGTCTAAAGCGAAGCAAGCTAGCTCTCGTGCTAAGAAGCTTGAAAAAATCAGCC
TAGATGAAGTTAAATCATCAAGCCGTATGACACCGTCACTCCGTTTCGATGATGGTAAGAAGATGCACCGCCAGGCGCTT
ATTCTTGAAAACGTCGGTCATGGTTTTGACGGCGAAACCCTATTTGAAGGCGGAGAGTTGATCCTTGAAGCTGGCGCTAA
ACTAGCTGTTATTGGCGAGAACGGTGTCGGTAAATCAACCTTCTTACGTTGTTTGGTGAATGAATTACAAAACAACCATG
GCGTAATCAAGTGGTCTGAGAATGCTTCAATCGGCTACTGCCCGCAGGATAGCAGCAAAGACTTTGATAATGATCTAAGC
CTATTTGATTGGATGTCACAATGGCGCCTTCCTAAGCATAACGACCTAATGGTACGTGGCATGCTAGGCCGTCTACTATT
TACTGAAGACGACATCAACAAGAAAGCGCGCAACTGTTCTGGTGGTGAGAAAAACCGCCTATTATTTGGCAAGTTAATGA
TGATGGACATCAACGTGCTGGTAATGGACGAGCCAACTAACCACATGGACATGGAAGCGATTGAAGCATTAAACAATGCG
CTTAAAGTGTATGAAGGTACGCTGATTTTCGTTAGCCACGATCGTGAGTTTGTTTCATCTTTGGCAACTCGTATTATCGA
TGTTAAAGACAAGAAGCTGGTTAACTTCCAGGGTACCTTTAATGAGTACATGGCAAGTCAGGCTGAAAATGAAGCAAGTA
AAAGAGCCTAA

Upstream 100 bases:

>100_bases
TGTATAATCCGCGGCTGTTTTGCCTCTCAAGCAGGATTAGTCACCCTAACCTGTTAGCGTCTTTGGCTTTCACTTTATAT
TAATCACTCAGGATACTCTT

Downstream 100 bases:

>100_bases
TTGATTATTTCCCTGCACGCCATCAGGCATGCTGGGTTAATCCATAAAAATGGCGCTAATCTTTTGATTAGCGCCATTTT
TTATGTAAACCATTAGAGTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEFS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGETLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNHGVIKWSENASIGYCPQDSSKDFDNDLS
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKVYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAENEASKRA

Sequences:

>Translated_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEFS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGETLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNHGVIKWSENASIGYCPQDSSKDFDNDLS
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKVYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAENEASKRA
>Mature_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEFS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGETLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNHGVIKWSENASIGYCPQDSSKDFDNDLS
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKVYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAENEASKRA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=29.8311444652908, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI10947137, Length=540, Percent_Identity=28.5185185185185, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI27881506, Length=541, Percent_Identity=28.8354898336414, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=27.8719397363465, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=27.8719397363465, Blast_Score=199, Evalue=6e-51,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=63.6363636363636, Blast_Score=724, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=31.8181818181818, Blast_Score=265, Evalue=5e-72,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=30.5447470817121, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=29.1984732824427, Blast_Score=211, Evalue=9e-56,
Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=27.1966527196653, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=28.7292817679558, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=28.7128712871287, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=26.8398268398268, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=240, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789032, Length=216, Percent_Identity=28.2407407407407, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=24, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=28.7037037037037, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=31.0280373831776, Blast_Score=225, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=25.8490566037736, Blast_Score=208, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=29.9445471349353, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=29.9435028248588, Blast_Score=229, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=24.2130750605327, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=24.6973365617433, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=25.0639386189258, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=29.5112781954887, Blast_Score=251, Evalue=9e-67,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=28.7795992714025, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=28.7795992714025, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=28.1481481481481, Blast_Score=219, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59909; Mature: 59909

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSI
CCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQKVGTLSQNQFAFEEFSVIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
SEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGFKLRVLLAQALFSNPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
CCCCCCCEEEHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHC
SRMTPSLRFDDGKKMHRQALILENVGHGFDGETLFEGGELILEAGAKLAVIGENGVGKST
CCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEEECCCCCHHH
FLRCLVNELQNNHGVIKWSENASIGYCPQDSSKDFDNDLSLFDWMSQWRLPKHNDLMVRG
HHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
MLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
HHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHH
LKVYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAENEASKRA
HHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSI
CCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQKVGTLSQNQFAFEEFSVIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
SEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGFKLRVLLAQALFSNPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
CCCCCCCEEEHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHC
SRMTPSLRFDDGKKMHRQALILENVGHGFDGETLFEGGELILEAGAKLAVIGENGVGKST
CCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEEECCCCCHHH
FLRCLVNELQNNHGVIKWSENASIGYCPQDSSKDFDNDLSLFDWMSQWRLPKHNDLMVRG
HHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
MLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
HHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHH
LKVYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAENEASKRA
HHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]