| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is msrA [H]
Identifier: 157962069
GI number: 157962069
Start: 2726486
End: 2726965
Strand: Direct
Name: msrA [H]
Synonym: Spea_2248
Alternate gene names: 157962069
Gene position: 2726486-2726965 (Clockwise)
Preceding gene: 157962062
Following gene: 157962071
Centisome position: 52.69
GC content: 44.58
Gene sequence:
>480_bases ATGGCATTGGCAACATTCGGCGCAGGGTGTTTTTGGGGAGTTGAATACTTTTTCAGAGAAGTTGAAGGTGTCATTGACTG TACGTGCGGATATATGGGCGGCAAAGACAGCTACACCCGCTACGCAGAAGTCAAAACGGGTACCACTGGTCACGCAGAGG TTGTGCAAGTGGAGTACGACCCTAACATTGTGAGTTACCAACGCTTACTGGAGGTTTTTTGGCAGAACCACAATCCCACC ACATTGAATCAACAAGGTGGTGATATTGGTAGCCAGTATAGAAGCGCTGTTTTTTTTCATGATAAACAACAGAAGCATCA GGCCGAAGTTGCCAAATTAGCACTCATCAAAAGTGCAAAATGGGGCTCACGCCAGATAGTCACTGAAGTTGTACCTTGTC AGCAGTTTCATCAGGCTGAAGCGTATCATCAAGATTACTTAGCTAAAAATGAATTGCCTAGCTGTCATATCAGTTATTAA
Upstream 100 bases:
>100_bases CTATGCGCTTTTTTACTTGCGCAAACCTAAAAAATAAAACAAGATAAAGACATCTAGCCATCCAAACGGCTATTTGTGAT AATTTATTGAGGAGACAGTA
Downstream 100 bases:
>100_bases CACCGATAAACAACGAGTCATAATTGATATTACGTACTCATTTATATAAAGCGCAAAGAAAAGCACTCAAGGTTCCATAA TGAAACTCATGACTGTGTGC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MALATFGAGCFWGVEYFFREVEGVIDCTCGYMGGKDSYTRYAEVKTGTTGHAEVVQVEYDPNIVSYQRLLEVFWQNHNPT TLNQQGGDIGSQYRSAVFFHDKQQKHQAEVAKLALIKSAKWGSRQIVTEVVPCQQFHQAEAYHQDYLAKNELPSCHISY
Sequences:
>Translated_159_residues MALATFGAGCFWGVEYFFREVEGVIDCTCGYMGGKDSYTRYAEVKTGTTGHAEVVQVEYDPNIVSYQRLLEVFWQNHNPT TLNQQGGDIGSQYRSAVFFHDKQQKHQAEVAKLALIKSAKWGSRQIVTEVVPCQQFHQAEAYHQDYLAKNELPSCHISY >Mature_158_residues ALATFGAGCFWGVEYFFREVEGVIDCTCGYMGGKDSYTRYAEVKTGTTGHAEVVQVEYDPNIVSYQRLLEVFWQNHNPTT LNQQGGDIGSQYRSAVFFHDKQQKHQAEVAKLALIKSAKWGSRQIVTEVVPCQQFHQAEAYHQDYLAKNELPSCHISY
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=156, Percent_Identity=42.9487179487179, Blast_Score=120, Evalue=5e-28, Organism=Homo sapiens, GI208609995, Length=156, Percent_Identity=42.9487179487179, Blast_Score=120, Evalue=6e-28, Organism=Homo sapiens, GI208609993, Length=103, Percent_Identity=45.6310679611651, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=43.7908496732026, Blast_Score=130, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17533973, Length=146, Percent_Identity=34.2465753424658, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320881, Length=159, Percent_Identity=40.251572327044, Blast_Score=118, Evalue=4e-28, Organism=Drosophila melanogaster, GI24664627, Length=145, Percent_Identity=37.2413793103448, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24664631, Length=147, Percent_Identity=38.7755102040816, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI45553131, Length=138, Percent_Identity=35.5072463768116, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 18038; Mature: 17907
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALATFGAGCFWGVEYFFREVEGVIDCTCGYMGGKDSYTRYAEVKTGTTGHAEVVQVEYD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC PNIVSYQRLLEVFWQNHNPTTLNQQGGDIGSQYRSAVFFHDKQQKHQAEVAKLALIKSAK CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCC WGSRQIVTEVVPCQQFHQAEAYHQDYLAKNELPSCHISY CCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure ALATFGAGCFWGVEYFFREVEGVIDCTCGYMGGKDSYTRYAEVKTGTTGHAEVVQVEYD CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEC PNIVSYQRLLEVFWQNHNPTTLNQQGGDIGSQYRSAVFFHDKQQKHQAEVAKLALIKSAK CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCC WGSRQIVTEVVPCQQFHQAEAYHQDYLAKNELPSCHISY CCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]