| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962062
Identifier: 157962062
GI number: 157962062
Start: 2716796
End: 2717467
Strand: Direct
Name: 157962062
Synonym: Spea_2241
Alternate gene names: NA
Gene position: 2716796-2717467 (Clockwise)
Preceding gene: 157962061
Following gene: 157962069
Centisome position: 52.5
GC content: 40.62
Gene sequence:
>672_bases ATGGCCACAAAGCATGACTCTAATTGGATTGTTATGAACAAAGTTTTTATTATTGGACTACCACGAACTGGCACCACCAG TATCAGTGTAGCCATGTTAGATTATGGTTTTAAAGTTGCACACACAGCATACACACAACAGGCATTTAACCTAGCCGATA TTGTCTCTGATGCCCCCTGCTTTAGCGACTATCAGCAACTAGATAAGCTATTTCCCGATGCTAAGTTTGTTTATCTAGAG CGAGAGCTATCTCTGTGGATCCCCTCTATGCAGATGCTGATCAACAAGATGAAAGTCGAGTTGGACTTAAAGACTGGGAC ATTTAACCCCGTGTTAAAGCGCAGCTTTAACCATACTTTTATGTTAGACAAAACTGATAATCCTGATGAACCAGCTCATT TAGAGAAATGTTATTTAGATCATAAACAACAAGTTCTCCATTATTTCGCCGATCGTGATGATTTTATTCGGATCAACATC AGTCATGAAGAGAGTCTAGGTCAATTACTTACTTTCCTTGGGCTAGAAGTCGATGGCAGCCCACAGTTTCCTCATCTAAA CATAGGACGAAACGTGGCTTGCTGGGAAGAGCACAAACATCCAAATAAAGTTAATGCCAATAGTATAGGGCCGCTACGCA GAAAATTTTTCGATTATGCCGCTAAGCTTTAG
Upstream 100 bases:
>100_bases CGAATTTTCTATTTATTCAGCCCGTTACTCTAGTTCTTGCAATGATTCTTATATTCGCTGTTTTCTTTAGCCGCCAACGT AGCGATTCGTTGGCGCCACT
Downstream 100 bases:
>100_bases CAAAAGCTCTGGCAACTAAATTCCGGCTTGAAAGGATAGTGCAAGAATTACAGACAGCAAAAAGCCCGTTATCTTTCGAT AACGGGCTTTTCAGAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MATKHDSNWIVMNKVFIIGLPRTGTTSISVAMLDYGFKVAHTAYTQQAFNLADIVSDAPCFSDYQQLDKLFPDAKFVYLE RELSLWIPSMQMLINKMKVELDLKTGTFNPVLKRSFNHTFMLDKTDNPDEPAHLEKCYLDHKQQVLHYFADRDDFIRINI SHEESLGQLLTFLGLEVDGSPQFPHLNIGRNVACWEEHKHPNKVNANSIGPLRRKFFDYAAKL
Sequences:
>Translated_223_residues MATKHDSNWIVMNKVFIIGLPRTGTTSISVAMLDYGFKVAHTAYTQQAFNLADIVSDAPCFSDYQQLDKLFPDAKFVYLE RELSLWIPSMQMLINKMKVELDLKTGTFNPVLKRSFNHTFMLDKTDNPDEPAHLEKCYLDHKQQVLHYFADRDDFIRINI SHEESLGQLLTFLGLEVDGSPQFPHLNIGRNVACWEEHKHPNKVNANSIGPLRRKFFDYAAKL >Mature_222_residues ATKHDSNWIVMNKVFIIGLPRTGTTSISVAMLDYGFKVAHTAYTQQAFNLADIVSDAPCFSDYQQLDKLFPDAKFVYLER ELSLWIPSMQMLINKMKVELDLKTGTFNPVLKRSFNHTFMLDKTDNPDEPAHLEKCYLDHKQQVLHYFADRDDFIRINIS HEESLGQLLTFLGLEVDGSPQFPHLNIGRNVACWEEHKHPNKVNANSIGPLRRKFFDYAAKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25708; Mature: 25577
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKHDSNWIVMNKVFIIGLPRTGTTSISVAMLDYGFKVAHTAYTQQAFNLADIVSDAPC CCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC FSDYQQLDKLFPDAKFVYLERELSLWIPSMQMLINKMKVELDLKTGTFNPVLKRSFNHTF HHHHHHHHHHCCCCEEEEEEEEHHHCCHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCEE MLDKTDNPDEPAHLEKCYLDHKQQVLHYFADRDDFIRINISHEESLGQLLTFLGLEVDGS EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCEECCC PQFPHLNIGRNVACWEEHKHPNKVNANSIGPLRRKFFDYAAKL CCCCEECCCCCEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ATKHDSNWIVMNKVFIIGLPRTGTTSISVAMLDYGFKVAHTAYTQQAFNLADIVSDAPC CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC FSDYQQLDKLFPDAKFVYLERELSLWIPSMQMLINKMKVELDLKTGTFNPVLKRSFNHTF HHHHHHHHHHCCCCEEEEEEEEHHHCCHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCEE MLDKTDNPDEPAHLEKCYLDHKQQVLHYFADRDDFIRINISHEESLGQLLTFLGLEVDGS EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCEECCC PQFPHLNIGRNVACWEEHKHPNKVNANSIGPLRRKFFDYAAKL CCCCEECCCCCEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA