| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961704
Identifier: 157961704
GI number: 157961704
Start: 2290918
End: 2291757
Strand: Direct
Name: 157961704
Synonym: Spea_1880
Alternate gene names: NA
Gene position: 2290918-2291757 (Clockwise)
Preceding gene: 157961703
Following gene: 157961706
Centisome position: 44.27
GC content: 43.57
Gene sequence:
>840_bases ATGGCTACTGTGGTGTTAATTCGAGGCTTGATGCGCGATAAACGTCACTGGCATAATTTTGCTGAGTTGCTGCAAAAAAG TCTATCTGACAGACATAGTGTTATTGCGTTAGATACCTTAGGTAATGGGGATTTGGTTAACAGCCTCAGTCCGTTAACCA TCGATGAGTATGCCCGGGAGCTACTAGAGCGCTTAAACTACGATAGCAGTTACAATAACAGTAGCGATAACAGCGACGAT AAGTATAACAACTGTTATTTGGTTGGGTTATCTATGGGGGGCATGATAGCGCTGCAGATGGCCAGCTTGCAGGAGCGAGC TTTAGGCTTAGCAAGTGATAAAAGTGATAAAAGTGATAAAAGTCATAACAGAATAAAATCTGTGGCGGTGATTAATGCTA GCGCCGCCAATCTATCTCCTTGGCATGAACGTTTTAGGTTTGGCGCTTTATTCACGGCGTTTAAACGTAGAATGAAAGGA GCAAACATCAGTGCTGTAGAGGCTTGTATTATTGCCTTAACCAGCTCAACTCAGCGGCAAAATATCAAGCTGGTCCTTAG CTGGAGTCAATATCGCGCTGTAGCATGCACGAGCTTATTCAATGGACTACGTCAGCTATGGGCTTGTAGACAGTTTATGA GCCCTGTAGCGCTATCTGTGCCAATCACTGTGCTATGTGGGAGAGAAGATAAACTGGTCAGCCCTGATTGCAGCAAAAAG CTTGCTCGATACTATCAAAGCAAGCTTATTGAATTTAACTTTGCTGGTCATGACTTAAGTTTAGATAGCCCTGAAAAGCT CTGTCAGGAGCTTATCGAGAGCTTCTCACTTAAACCTTAA
Upstream 100 bases:
>100_bases AAGAATTTTGGACTGGTGAATTGTGAACTAAATTGTGGACTTAATTGTGAACTAATGGATTTCGCAGTCACTCCTCTCAC AGAATGATATCGGAGTTATG
Downstream 100 bases:
>100_bases ACGTAAAAATTAAGCTTTTGCAACGACCGTTTGTCCGATAGGCGTTAGGCTCAAAATGGCTAACTTAAGGTGCTGTAGGG CAAATGGGATACCGATAATA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Or Acyltransferase-Like Protein; Alpha/Beta Hydrolase Family Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MATVVLIRGLMRDKRHWHNFAELLQKSLSDRHSVIALDTLGNGDLVNSLSPLTIDEYARELLERLNYDSSYNNSSDNSDD KYNNCYLVGLSMGGMIALQMASLQERALGLASDKSDKSDKSHNRIKSVAVINASAANLSPWHERFRFGALFTAFKRRMKG ANISAVEACIIALTSSTQRQNIKLVLSWSQYRAVACTSLFNGLRQLWACRQFMSPVALSVPITVLCGREDKLVSPDCSKK LARYYQSKLIEFNFAGHDLSLDSPEKLCQELIESFSLKP
Sequences:
>Translated_279_residues MATVVLIRGLMRDKRHWHNFAELLQKSLSDRHSVIALDTLGNGDLVNSLSPLTIDEYARELLERLNYDSSYNNSSDNSDD KYNNCYLVGLSMGGMIALQMASLQERALGLASDKSDKSDKSHNRIKSVAVINASAANLSPWHERFRFGALFTAFKRRMKG ANISAVEACIIALTSSTQRQNIKLVLSWSQYRAVACTSLFNGLRQLWACRQFMSPVALSVPITVLCGREDKLVSPDCSKK LARYYQSKLIEFNFAGHDLSLDSPEKLCQELIESFSLKP >Mature_278_residues ATVVLIRGLMRDKRHWHNFAELLQKSLSDRHSVIALDTLGNGDLVNSLSPLTIDEYARELLERLNYDSSYNNSSDNSDDK YNNCYLVGLSMGGMIALQMASLQERALGLASDKSDKSDKSHNRIKSVAVINASAANLSPWHERFRFGALFTAFKRRMKGA NISAVEACIIALTSSTQRQNIKLVLSWSQYRAVACTSLFNGLRQLWACRQFMSPVALSVPITVLCGREDKLVSPDCSKKL ARYYQSKLIEFNFAGHDLSLDSPEKLCQELIESFSLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31249; Mature: 31118
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVVLIRGLMRDKRHWHNFAELLQKSLSDRHSVIALDTLGNGDLVNSLSPLTIDEYARE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCHHHHHHH LLERLNYDSSYNNSSDNSDDKYNNCYLVGLSMGGMIALQMASLQERALGLASDKSDKSDK HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCH SHNRIKSVAVINASAANLSPWHERFRFGALFTAFKRRMKGANISAVEACIIALTSSTQRQ HHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC NIKLVLSWSQYRAVACTSLFNGLRQLWACRQFMSPVALSVPITVLCGREDKLVSPDCSKK CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCHHHH LARYYQSKLIEFNFAGHDLSLDSPEKLCQELIESFSLKP HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ATVVLIRGLMRDKRHWHNFAELLQKSLSDRHSVIALDTLGNGDLVNSLSPLTIDEYARE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCHHHHHHH LLERLNYDSSYNNSSDNSDDKYNNCYLVGLSMGGMIALQMASLQERALGLASDKSDKSDK HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCH SHNRIKSVAVINASAANLSPWHERFRFGALFTAFKRRMKGANISAVEACIIALTSSTQRQ HHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC NIKLVLSWSQYRAVACTSLFNGLRQLWACRQFMSPVALSVPITVLCGREDKLVSPDCSKK CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCHHHH LARYYQSKLIEFNFAGHDLSLDSPEKLCQELIESFSLKP HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA