Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961703

Identifier: 157961703

GI number: 157961703

Start: 2289976

End: 2290767

Strand: Direct

Name: 157961703

Synonym: Spea_1879

Alternate gene names: NA

Gene position: 2289976-2290767 (Clockwise)

Preceding gene: 157961700

Following gene: 157961704

Centisome position: 44.25

GC content: 44.32

Gene sequence:

>792_bases
GTGATCTCGGGTATAAGGCTGTTAAAGAAGTGCAGAGCAGTTTCAGTTAGCTTTTGTAGAAGGCTAGCAAGAGTTATCTT
GTGCCTGTTTTTTATCCTCTTCTCTTGCAATATACATGCAGATACCCTGTATTTAACTTCATTGCATTGGCCGCCTTTCG
CTGGAGAGCGGCTACAAAATCAGGGGGCTTGTATTGCTGTCACTAAGGCGGCACTCGAGGCTACTGGGCATACTGTTGTC
GTTGACTTCTTTCCTTGGAGCCGTGCAGTAAGAATGGCGTCACGAAACGATTCTAAATACTTAGGTTACCTTCCAGAATA
TAGCTACCCCACAGATAAGTTTGTTTTCTCCCAGCCTATGGGGCGAAGTGTTTTAGGTCTGGTCGAACAAAAATCCTATC
CTGTTAGCTGGACTCAGCAAAGTGATTTGAATCATTACACCATTGGCGTGGTTCAAGGGTACGTTAATACCCATGAGCTT
GATGAGATGATGACTCAAGGAAGCCAGCCATATGAGGCCGTTGCATCAGATCTACATAACCTGAATAAGGTCGCTACGGG
GCGAATCGATGCGGCGGTTATTGATGAGCATGTGCTGAAATATCTGCTCGCCCAGCCCAATATGGCGCATGTTAGGAATA
AATTGCAGTTTAATAAGAAGTTATTAACTTACAAAGAGCTATTCGTTGCGTTTAAAAATAACAAAGAGGGACGCATGTGG
CGAGACCGCTTCAATCAAGGATTGGCTCAAATAGACGTGCAACAGATCTTAGAACAAAATATGCAACGCTAG

Upstream 100 bases:

>100_bases
TATCACAGGTTTTGACTAAAATCTTGGGTAGGTTAAGTTAAAACTCTTACTGAGCGGCAAATATTCATTATCGGCTTTAG
CAGTAAGTAAAAGGCGGTAT

Downstream 100 bases:

>100_bases
GTTGAACGAGTATGACTGGCAATGCTATTTGAGTAAATTGTTTCTCACTCAAGAATTTTGGACTGGTGAATTGTGAACTA
AATTGTGGACTTAATTGTGA

Product: ABC transporter

Products: NA

Alternate protein names: ABC Transporter; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; Sugar ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MISGIRLLKKCRAVSVSFCRRLARVILCLFFILFSCNIHADTLYLTSLHWPPFAGERLQNQGACIAVTKAALEATGHTVV
VDFFPWSRAVRMASRNDSKYLGYLPEYSYPTDKFVFSQPMGRSVLGLVEQKSYPVSWTQQSDLNHYTIGVVQGYVNTHEL
DEMMTQGSQPYEAVASDLHNLNKVATGRIDAAVIDEHVLKYLLAQPNMAHVRNKLQFNKKLLTYKELFVAFKNNKEGRMW
RDRFNQGLAQIDVQQILEQNMQR

Sequences:

>Translated_263_residues
MISGIRLLKKCRAVSVSFCRRLARVILCLFFILFSCNIHADTLYLTSLHWPPFAGERLQNQGACIAVTKAALEATGHTVV
VDFFPWSRAVRMASRNDSKYLGYLPEYSYPTDKFVFSQPMGRSVLGLVEQKSYPVSWTQQSDLNHYTIGVVQGYVNTHEL
DEMMTQGSQPYEAVASDLHNLNKVATGRIDAAVIDEHVLKYLLAQPNMAHVRNKLQFNKKLLTYKELFVAFKNNKEGRMW
RDRFNQGLAQIDVQQILEQNMQR
>Mature_263_residues
MISGIRLLKKCRAVSVSFCRRLARVILCLFFILFSCNIHADTLYLTSLHWPPFAGERLQNQGACIAVTKAALEATGHTVV
VDFFPWSRAVRMASRNDSKYLGYLPEYSYPTDKFVFSQPMGRSVLGLVEQKSYPVSWTQQSDLNHYTIGVVQGYVNTHEL
DEMMTQGSQPYEAVASDLHNLNKVATGRIDAAVIDEHVLKYLLAQPNMAHVRNKLQFNKKLLTYKELFVAFKNNKEGRMW
RDRFNQGLAQIDVQQILEQNMQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30127; Mature: 30127

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGIRLLKKCRAVSVSFCRRLARVILCLFFILFSCNIHADTLYLTSLHWPPFAGERLQN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHC
QGACIAVTKAALEATGHTVVVDFFPWSRAVRMASRNDSKYLGYLPEYSYPTDKFVFSQPM
CCCEEEEHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCC
GRSVLGLVEQKSYPVSWTQQSDLNHYTIGVVQGYVNTHELDEMMTQGSQPYEAVASDLHN
CHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHEHHCCHHHHHHHHHCCCCCHHHHHHHHHH
LNKVATGRIDAAVIDEHVLKYLLAQPNMAHVRNKLQFNKKLLTYKELFVAFKNNKEGRMW
HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RDRFNQGLAQIDVQQILEQNMQR
HHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISGIRLLKKCRAVSVSFCRRLARVILCLFFILFSCNIHADTLYLTSLHWPPFAGERLQN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHC
QGACIAVTKAALEATGHTVVVDFFPWSRAVRMASRNDSKYLGYLPEYSYPTDKFVFSQPM
CCCEEEEHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCC
GRSVLGLVEQKSYPVSWTQQSDLNHYTIGVVQGYVNTHELDEMMTQGSQPYEAVASDLHN
CHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHEHHCCHHHHHHHHHCCCCCHHHHHHHHHH
LNKVATGRIDAAVIDEHVLKYLLAQPNMAHVRNKLQFNKKLLTYKELFVAFKNNKEGRMW
HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RDRFNQGLAQIDVQQILEQNMQR
HHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA