| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961668
Identifier: 157961668
GI number: 157961668
Start: 2243350
End: 2244402
Strand: Direct
Name: 157961668
Synonym: Spea_1844
Alternate gene names: NA
Gene position: 2243350-2244402 (Clockwise)
Preceding gene: 157961667
Following gene: 157961669
Centisome position: 43.35
GC content: 46.15
Gene sequence:
>1053_bases GTGAATAATCTAAAATCCGCAGTCTGGTATTGGTTCAAGCAAGAGAAGATAAGCTCGGAGTCACTGCCTGATACTTTATC CTGGGTCTGTGATAATGCTAAAAACCGACCGAGTGCCAAACAGTGGCGTGCCTTGAGTGACTTATTACTCACCTGGCTTG CAGCCCTATTTATCGGCTCTGGTTTGGTATTCTTTGTGGCGGCAAATTGGCAAACCATGAGCCAGTTTGCTCGGTTTGCT CTAGTCGAGTCTGCTGTTGTGTTAGCTATGTTTCTATACGTATTTTTACGCTGGCGCGCCCTTAAGAAGGGGGACAAGTT AGGCTTGGGTTATACCTCAGCTAATGCAGTGTTGCTGGCGCTTGCCATCCTCATCGGCAGTTTGTTAGCTCTTGTCGGTC AGACCTATCAGACTGGCGCAGATCCTTGGCAGTTGTTTACCCTTTGGGCACTATTCACCCTTCCGCTTGCTTTAGTTGCA GGCTCAGAGCTTTTATGGCTGCTCTTGGGTCTGTTATTGAATCTTGCCACTGTGCTTTATTATCAAACCTTTCCCGGTTT GTTTGGCCGGCTATTATTGTTCGATCTCGCCTTAGAGGCGTTATTTATACTGAATCTGTTAGTTCACATCTTGAGTCTGC TACTCAGTGGCAATCTAGGTTCATCCATTAATAGACCGTCCAATCGTCACCTTAGATTTTCAGCGCCTTTACTACAACAG CTCACCATTACAATCGCTGTTGTCTGTGTAACACTGCTGGCAATTGAAGAGATCTTCGATTGGAATTCGGGTGTTTGGTT ATGGGTTTACTGCGCACTTATCGCAGCGGGTTACTGGCTTTATAACCTTAAATTGAAGCAGATATTTGTACTCGCCATCG GTGGTTTTAGCCTAGTCGCAGTCTTTAATAGTCTATTGACTCGTATGGTACTAGAGGGAAACGAGCCCATTGGTTTGTTA CTGGTGCTAGGCCTGTGCATTATCGGAACGACCAGTTTGCTGACCCTATGGCTTCGCCAACGTCATCGGGTATTTCGTAA AGGAGGCAATTGA
Upstream 100 bases:
>100_bases CATTGAGCAAAAACAGTTTAGTGCTTAAAATTAACCAGATATTGATTGGATACTAAAATGTAGCGACATCAAGAATTTCT AGAACATTTAGGAACAGCGA
Downstream 100 bases:
>100_bases TGAAAAATCAAATGCGTATAGCAAAATATTTTTCATCATCAGAGTCTGAGCTTAACCAACTCTGGACTAGTTTGCTTAAT CGAAATCTAACCACACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNNLKSAVWYWFKQEKISSESLPDTLSWVCDNAKNRPSAKQWRALSDLLLTWLAALFIGSGLVFFVAANWQTMSQFARFA LVESAVVLAMFLYVFLRWRALKKGDKLGLGYTSANAVLLALAILIGSLLALVGQTYQTGADPWQLFTLWALFTLPLALVA GSELLWLLLGLLLNLATVLYYQTFPGLFGRLLLFDLALEALFILNLLVHILSLLLSGNLGSSINRPSNRHLRFSAPLLQQ LTITIAVVCVTLLAIEEIFDWNSGVWLWVYCALIAAGYWLYNLKLKQIFVLAIGGFSLVAVFNSLLTRMVLEGNEPIGLL LVLGLCIIGTTSLLTLWLRQRHRVFRKGGN
Sequences:
>Translated_350_residues MNNLKSAVWYWFKQEKISSESLPDTLSWVCDNAKNRPSAKQWRALSDLLLTWLAALFIGSGLVFFVAANWQTMSQFARFA LVESAVVLAMFLYVFLRWRALKKGDKLGLGYTSANAVLLALAILIGSLLALVGQTYQTGADPWQLFTLWALFTLPLALVA GSELLWLLLGLLLNLATVLYYQTFPGLFGRLLLFDLALEALFILNLLVHILSLLLSGNLGSSINRPSNRHLRFSAPLLQQ LTITIAVVCVTLLAIEEIFDWNSGVWLWVYCALIAAGYWLYNLKLKQIFVLAIGGFSLVAVFNSLLTRMVLEGNEPIGLL LVLGLCIIGTTSLLTLWLRQRHRVFRKGGN >Mature_350_residues MNNLKSAVWYWFKQEKISSESLPDTLSWVCDNAKNRPSAKQWRALSDLLLTWLAALFIGSGLVFFVAANWQTMSQFARFA LVESAVVLAMFLYVFLRWRALKKGDKLGLGYTSANAVLLALAILIGSLLALVGQTYQTGADPWQLFTLWALFTLPLALVA GSELLWLLLGLLLNLATVLYYQTFPGLFGRLLLFDLALEALFILNLLVHILSLLLSGNLGSSINRPSNRHLRFSAPLLQQ LTITIAVVCVTLLAIEEIFDWNSGVWLWVYCALIAAGYWLYNLKLKQIFVLAIGGFSLVAVFNSLLTRMVLEGNEPIGLL LVLGLCIIGTTSLLTLWLRQRHRVFRKGGN
Specific function: Unknown
COG id: COG4984
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39069; Mature: 39069
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKSAVWYWFKQEKISSESLPDTLSWVCDNAKNRPSAKQWRALSDLLLTWLAALFIGS CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GLVFFVAANWQTMSQFARFALVESAVVLAMFLYVFLRWRALKKGDKLGLGYTSANAVLLA CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAILIGSLLALVGQTYQTGADPWQLFTLWALFTLPLALVAGSELLWLLLGLLLNLATVLY HHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YQTFPGLFGRLLLFDLALEALFILNLLVHILSLLLSGNLGSSINRPSNRHLRFSAPLLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHH LTITIAVVCVTLLAIEEIFDWNSGVWLWVYCALIAAGYWLYNLKLKQIFVLAIGGFSLVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VFNSLLTRMVLEGNEPIGLLLVLGLCIIGTTSLLTLWLRQRHRVFRKGGN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNLKSAVWYWFKQEKISSESLPDTLSWVCDNAKNRPSAKQWRALSDLLLTWLAALFIGS CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GLVFFVAANWQTMSQFARFALVESAVVLAMFLYVFLRWRALKKGDKLGLGYTSANAVLLA CHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LAILIGSLLALVGQTYQTGADPWQLFTLWALFTLPLALVAGSELLWLLLGLLLNLATVLY HHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YQTFPGLFGRLLLFDLALEALFILNLLVHILSLLLSGNLGSSINRPSNRHLRFSAPLLQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHH LTITIAVVCVTLLAIEEIFDWNSGVWLWVYCALIAAGYWLYNLKLKQIFVLAIGGFSLVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VFNSLLTRMVLEGNEPIGLLLVLGLCIIGTTSLLTLWLRQRHRVFRKGGN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA