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The map label for this gene is ydiK [H]

Identifier: 157961667

GI number: 157961667

Start: 2241570

End: 2242721

Strand: Direct

Name: ydiK [H]

Synonym: Spea_1843

Alternate gene names: 157961667

Gene position: 2241570-2242721 (Clockwise)

Preceding gene: 157961666

Following gene: 157961668

Centisome position: 43.32

GC content: 47.14

Gene sequence:

>1152_bases
ATGGAAAACCCAATGCAACATACTCAAAGTAAATTGTTCGTCAATAATATGATGGAATCGGCGATTCGAATAGGCTTGCT
GTTTATGCTGCTTGTTTGGACCTTCGATATCATCAAACCCTTCGTGATCCCAGTGCTTTGGGGGGCGATTATTGCCGTTG
CATTGATGCCGATGACTCAAAAACTTGAGCGGGCGCTTAAAGGGCGCAGAGGGCTTGCTGCTACCATACTGGCCTTAGCA
GGGATTATCTTACTTATCGCACCATTCTGGATTGTTTCAAGTTCAATCTTCGATGGGGTCTCTCATATAGTCGCAGTGAT
GCAGGCTGGCGATATTAAAATCCCTGGACCGACTCAAAGAGTGGCTGATATTCCATTAATTGGCGATAAACTCTTTGACG
CATGGGCATTGTTTGCCACTAACCTTGAAAAAGCTGTGCTGCATTTTCTACCGCAAATTAAGACCGGAGTTAGCGCGGCG
GCAGGAATGCTCGGTAGTAGTCTAGGTACCTTAGTGATGTTTATTATTTCACTGGCTATCGCGGGGGGCTTTATGGCTCA
TGCCGAGAAGTCATCGGCAGCTGTGAGCACAGTAGCAGTGAGAGTGGTCGGTAAAAATGGAGAGGAATGGACCAGTTTGA
CCGCGGCAACCATTCGCAGCGTGTTGCTCGGTGTTGTCGGGGTGGCATTCATTCAATCTTTGTTGATAGGCTCAGCGTTA
TTTACTTTTAGTATTCCAGCTGCTGGTATATTTACCTTTATCGTGTTTATTCTGGGGATTGCTCAACTGCCGCCATTATT
GGTGGTATTACCGATTATCTTCTATGTGTTCTCGACTCAAGACTCAACGCCAGCCACTATATTTACCGTATGGGTATTGA
TCGCAGGCGTTTCAGACAGTTTCTTAAAGCCTATGCTGATGGGGCGCGGAGTCGATGTGCCAATGCCTGTCATTCTTATC
GGTGCGATAGGAGGCATGATTGCCGCGGGCATTATCGGTTTATTCTTAGGCGCAGTGATATTGGCGATTTGGTATGAGCT
ATTTACGACTTGGCTAAATATGGAAGAGGCGCAATTGGCGAGTGCTAAAGAGGCCGACGGGGCGGAAGATAAGCATGTTA
CTGCGCCAGAGCAGAGCGGAAAAGATGCTTAA

Upstream 100 bases:

>100_bases
TATATGGAGGCCATTGCCGGAGTGTTTTACATGGCAATTGTCGTTGCAAGTTTGGTGAGCGCAGGATTGGCTCAAAAAGA
CACCCAATAGGAACGTTAAT

Downstream 100 bases:

>100_bases
TTAATTTAATCGTTAGCTACTTTCAATGAAAATAGGCGCCACAGAGCGCCCATTTCATTTTTAGCCCTAAACCACCTACT
TCAGTAGGTGGTTATCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MENPMQHTQSKLFVNNMMESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILALA
GIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDAWALFATNLEKAVLHFLPQIKTGVSAA
AGMLGSSLGTLVMFIISLAIAGGFMAHAEKSSAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVWVLIAGVSDSFLKPMLMGRGVDVPMPVILI
GAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLASAKEADGAEDKHVTAPEQSGKDA

Sequences:

>Translated_383_residues
MENPMQHTQSKLFVNNMMESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILALA
GIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDAWALFATNLEKAVLHFLPQIKTGVSAA
AGMLGSSLGTLVMFIISLAIAGGFMAHAEKSSAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVWVLIAGVSDSFLKPMLMGRGVDVPMPVILI
GAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLASAKEADGAEDKHVTAPEQSGKDA
>Mature_383_residues
MENPMQHTQSKLFVNNMMESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILALA
GIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDAWALFATNLEKAVLHFLPQIKTGVSAA
AGMLGSSLGTLVMFIISLAIAGGFMAHAEKSSAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSAL
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVWVLIAGVSDSFLKPMLMGRGVDVPMPVILI
GAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLASAKEADGAEDKHVTAPEQSGKDA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=350, Percent_Identity=29.4285714285714, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40673; Mature: 40673

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPMQHTQSKLFVNNMMESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLERALKGRRGLAATILALAGIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
VADIPLIGDKLFDAWALFATNLEKAVLHFLPQIKTGVSAAAGMLGSSLGTLVMFIISLAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGFMAHAEKSSAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSAL
HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVWVLIAGVSDS
HHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
FLKPMLMGRGVDVPMPVILIGAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SAKEADGAEDKHVTAPEQSGKDA
HCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENPMQHTQSKLFVNNMMESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLERALKGRRGLAATILALAGIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
VADIPLIGDKLFDAWALFATNLEKAVLHFLPQIKTGVSAAAGMLGSSLGTLVMFIISLAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGFMAHAEKSSAAVSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSAL
HHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTFSIPAAGIFTFIVFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVWVLIAGVSDS
HHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHH
FLKPMLMGRGVDVPMPVILIGAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SAKEADGAEDKHVTAPEQSGKDA
HCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]