Click here to switch to the map view.

The map label for this gene is 157961664

Identifier: 157961664

GI number: 157961664

Start: 2238060

End: 2239349

Strand: Direct

Name: 157961664

Synonym: Spea_1840

Alternate gene names: NA

Gene position: 2238060-2239349 (Clockwise)

Preceding gene: 157961663

Following gene: 157961665

Centisome position: 43.25

GC content: 46.05

Gene sequence:

>1290_bases
ATGATAACAACACAGAGCAAAACTACTAGTGAATTAAAAAGCCGAACAGATTTCACGATAACGGAGCAAAAGCCTAACCT
GGTGCGCACTGTACTGTTAACCAGTGTATTGGCCGCCGCTGCGCTCGGCCTAACTGCTTGTGGTGATTCAGGGAGTGCTG
GCGTATTAACCGTTGAAGTGAATCGATCTGATTTTAAGGTGGATATCCCTGCATCGGGCGAGCTAGAGGCCAGTAATTCG
ACCACCATCAATGTGCCTACAGGCCTTCGTGGACCACAATCTCTCGCCTGGATTATCGATAATTTCAGTGACGTTAAAGC
GGGGGATGTCGTCGCTAAAATGGATTCGACCCGAGAGAGTTTTCGTTTGGAGATGGAACAGCTCGATTACGACCGTTTAG
GTTTAGATAGCCAAATCCAAACGCAAAAAGACAAGACTATAGATAAGAGTTTAAACACAGACACTAAAGTGACTGCACAG
GAACAAGATTTAGCCGATCGCTTTTTCAGTGAAGATGAACGGGTTTATACCAGAATCGATATTATCGATCAGATGCGAAA
CCAAGATTATCTCGAAGCTAAGATGGAGTTCTATGATTGGGGCTTAAGCCAGCATGGCTCTCAAGCGCAAGCGGAGCAAG
AGCTGATAAAGCTGAAGCAGAAAGGTCATAAGGCTAAGATGAATCGCTACTCCAATAATTTAAAACAGATGGAGATAGTT
GCGCCCCATGACGGTTTATTTGTGTCGCAAGCGGGTTGGAATGGCGCCTTGCCTGTTGCGGGAGACATGATGTGGTCGGG
GGTGACCATTGGCTTACTCCCCGATACTTCAAAGATGCAGGCCAAACTGTATGTTCTAGAATCTGAGGCCCTAGGTTTAG
CCATTGATAAGCCCGTTACCTTATATCTCGATGCTTATCCAGAATTGCCGATAACAGGCACGCTGACTCAACTCGATGCA
CTGGCAAAAGCGAAAGAGCAAGACAGTCCAGTTAACTATTTCCAGATCACGGTAACGCTCGATAAAACCTTAGAAGAGAT
CATGCAGCCTGGGCGGCAAGTTAATGCAATGGTGCATGCTTTGGATCTTAATGATGTGATTACTGTGCCTAATCAGGCGT
TATTTCAAAAGTCTGGAGAGTATTGGGTCTACATCAAGACATCAGCAGGCTTTGCTAAGCGTAGCGTTAAATTAGGTAAC
CGCAGCTTAAATAGAACGGTTGTTACTGAAGGATTAGAGCAAGGCGATACCATCGCGCTGACCACACCGCCGAAGAGGAA
TCGAGTATGA

Upstream 100 bases:

>100_bases
TATTTAATGACACTAAGCAGTACGTCGGCCTTGGTTCTATGGGCAAGGAGCGTGTAGCGATTACCTCCGGATTAAAAGAG
GGTGAGGAGGTATTACTGCC

Downstream 100 bases:

>100_bases
CCGCCAATAGAGCGCCGGTGAAGCTAGAAGCACAGTTCAACAAGGGCTCAATGAGTCCGTCTCGTCTACCTACCTCAGTA
TATTGGGAAGGAATTAAGCA

Product: membrane-fusion protein

Products: NA

Alternate protein names: Multidrug Resistance Efflux Pump-Like Protein; Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD Family Protein; Secretion Protein HlyD; RND Family Efflux Transporter MFP Subunit; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MITTQSKTTSELKSRTDFTITEQKPNLVRTVLLTSVLAAAALGLTACGDSGSAGVLTVEVNRSDFKVDIPASGELEASNS
TTINVPTGLRGPQSLAWIIDNFSDVKAGDVVAKMDSTRESFRLEMEQLDYDRLGLDSQIQTQKDKTIDKSLNTDTKVTAQ
EQDLADRFFSEDERVYTRIDIIDQMRNQDYLEAKMEFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSNNLKQMEIV
APHDGLFVSQAGWNGALPVAGDMMWSGVTIGLLPDTSKMQAKLYVLESEALGLAIDKPVTLYLDAYPELPITGTLTQLDA
LAKAKEQDSPVNYFQITVTLDKTLEEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYIKTSAGFAKRSVKLGN
RSLNRTVVTEGLEQGDTIALTTPPKRNRV

Sequences:

>Translated_429_residues
MITTQSKTTSELKSRTDFTITEQKPNLVRTVLLTSVLAAAALGLTACGDSGSAGVLTVEVNRSDFKVDIPASGELEASNS
TTINVPTGLRGPQSLAWIIDNFSDVKAGDVVAKMDSTRESFRLEMEQLDYDRLGLDSQIQTQKDKTIDKSLNTDTKVTAQ
EQDLADRFFSEDERVYTRIDIIDQMRNQDYLEAKMEFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSNNLKQMEIV
APHDGLFVSQAGWNGALPVAGDMMWSGVTIGLLPDTSKMQAKLYVLESEALGLAIDKPVTLYLDAYPELPITGTLTQLDA
LAKAKEQDSPVNYFQITVTLDKTLEEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYIKTSAGFAKRSVKLGN
RSLNRTVVTEGLEQGDTIALTTPPKRNRV
>Mature_429_residues
MITTQSKTTSELKSRTDFTITEQKPNLVRTVLLTSVLAAAALGLTACGDSGSAGVLTVEVNRSDFKVDIPASGELEASNS
TTINVPTGLRGPQSLAWIIDNFSDVKAGDVVAKMDSTRESFRLEMEQLDYDRLGLDSQIQTQKDKTIDKSLNTDTKVTAQ
EQDLADRFFSEDERVYTRIDIIDQMRNQDYLEAKMEFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSNNLKQMEIV
APHDGLFVSQAGWNGALPVAGDMMWSGVTIGLLPDTSKMQAKLYVLESEALGLAIDKPVTLYLDAYPELPITGTLTQLDA
LAKAKEQDSPVNYFQITVTLDKTLEEIMQPGRQVNAMVHALDLNDVITVPNQALFQKSGEYWVYIKTSAGFAKRSVKLGN
RSLNRTVVTEGLEQGDTIALTTPPKRNRV

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47479; Mature: 47479

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTQSKTTSELKSRTDFTITEQKPNLVRTVLLTSVLAAAALGLTACGDSGSAGVLTVEV
CCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE
NRSDFKVDIPASGELEASNSTTINVPTGLRGPQSLAWIIDNFSDVKAGDVVAKMDSTRES
CCCCEEEECCCCCCEECCCCEEEECCCCCCCCCHHHHEECCCCCCCCCCEEEHHHCCHHH
FRLEMEQLDYDRLGLDSQIQTQKDKTIDKSLNTDTKVTAQEQDLADRFFSEDERVYTRID
HHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCEEHHHH
IIDQMRNQDYLEAKMEFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSNNLKQMEIV
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEE
APHDGLFVSQAGWNGALPVAGDMMWSGVTIGLLPDTSKMQAKLYVLESEALGLAIDKPVT
CCCCCEEEEECCCCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEEECCCCCEEECCCEE
LYLDAYPELPITGTLTQLDALAKAKEQDSPVNYFQITVTLDKTLEEIMQPGRQVNAMVHA
EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHCCCHHEEHEEEE
LDLNDVITVPNQALFQKSGEYWVYIKTSAGFAKRSVKLGNRSLNRTVVTEGLEQGDTIAL
ECCCCEEECCCHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEEE
TTPPKRNRV
ECCCCCCCC
>Mature Secondary Structure
MITTQSKTTSELKSRTDFTITEQKPNLVRTVLLTSVLAAAALGLTACGDSGSAGVLTVEV
CCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE
NRSDFKVDIPASGELEASNSTTINVPTGLRGPQSLAWIIDNFSDVKAGDVVAKMDSTRES
CCCCEEEECCCCCCEECCCCEEEECCCCCCCCCHHHHEECCCCCCCCCCEEEHHHCCHHH
FRLEMEQLDYDRLGLDSQIQTQKDKTIDKSLNTDTKVTAQEQDLADRFFSEDERVYTRID
HHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCEEHHHH
IIDQMRNQDYLEAKMEFYDWGLSQHGSQAQAEQELIKLKQKGHKAKMNRYSNNLKQMEIV
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEE
APHDGLFVSQAGWNGALPVAGDMMWSGVTIGLLPDTSKMQAKLYVLESEALGLAIDKPVT
CCCCCEEEEECCCCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEEECCCCCEEECCCEE
LYLDAYPELPITGTLTQLDALAKAKEQDSPVNYFQITVTLDKTLEEIMQPGRQVNAMVHA
EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHCCCHHEEHEEEE
LDLNDVITVPNQALFQKSGEYWVYIKTSAGFAKRSVKLGNRSLNRTVVTEGLEQGDTIAL
ECCCCEEECCCHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEEE
TTPPKRNRV
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA