| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is macB [H]
Identifier: 157961665
GI number: 157961665
Start: 2239346
End: 2240659
Strand: Direct
Name: macB [H]
Synonym: Spea_1841
Alternate gene names: 157961665
Gene position: 2239346-2240659 (Clockwise)
Preceding gene: 157961664
Following gene: 157961666
Centisome position: 43.28
GC content: 48.17
Gene sequence:
>1314_bases ATGACCGCCAATAGAGCGCCGGTGAAGCTAGAAGCACAGTTCAACAAGGGCTCAATGAGTCCGTCTCGTCTACCTACCTC AGTATATTGGGAAGGAATTAAGCAAGCTTTTGACGAGATGCGGCATCATAAACTCCGTACGTCATTAACCTTACTGGGGA TGATATTCGGCGTAGGCGCAGTTATTGCTATGCTTAGTGTGGGTGAGGGGGCTGAGCGTGAAGCGCTTAAGATGATTGAA TCTATGGGAGTGAAAAACCTAGTCGTCAATGCTCGCAGCGCCGAAGGCGATGCACTTAAGTCGATACGAGAGCACAGCAT CGGTCTCAGTATTAGAGACGTAGAAAGTGCTCGTGATACCTTGCCATTTATAGACAATTGGAGCGCTGAGAAAAACGTAA AAGTGTTCAGCTTGTTTAGCTTAAAAGGCCGCAGCGACGCACAAGTCGTAGGTGTGACGCCAAGTTATTTTGACTTGAGT TCTTTACCTTTGGGAGAGGGACGAACGTTCAATGACAAGGATGAAGACTATTATCAACAAGTCGCGGTACTCGGCCCTGA GGCTGCTAGGAGCTTATTCCCTCAAGGCAGTGCCATTGGTAATTTGGTTAAGGTTAATCATCAGTGGTTTACCGTTGTTG GCGTGTTGTCAGAAAAAGAGAGCAGCAAGTCTAGCATTCAAGGAGTAAAGCTTGGCGGCGAGCGTAATCAAGTGTTTATT CCTTTGACCACAGCGCTCAAAAAAATGCAGTTTAACAGTTTAGAGAGTGAGCTCGATGCATTTAAATTGGCATTGGCCGA CGGTGTAGAGCCCTCGCTTGCAGCAAAAAGCTTACAGCATCTGCTAAATCGACGTCATGGCGGTGAAAAAGACTTTGATG TGGTGGTGCCTGCCGACTTACTGGCCCAGCACCAAAAAACCCAGCAGATCTTCAACATTGTAATGGCCTGTGTCGCTGGG ATTTCATTATTGGTTGGCGGGATCGGCATCATGAACATCATGTTAGCGACGATTTTAGAACGTACCGGTGAAATTGGTTT GCTCAGGGCTCTGGGGGCAAAGCGTAAGGATATTGCCCGTCAATTCTTGATTGAGAGCATCGCGATATCGGCCACAGGTG GCATCATAGGTATTGGTGTCGGATTGCTATTGGCCTTGATTATCTCCTCAGCTGCAGGCTGGCCTGTAGCATGGTCACCC TTTGCCATCTTGTTGGCCCTTGGAGTTTGTATGACAATCGGTGTGGGATTTGGTCTGTATCCTGCCAACAAAGCCGCCAA ACTTGACCCGATAGTGGCTCTGCAACGGGACTAG
Upstream 100 bases:
>100_bases TTAAATTAGGTAACCGCAGCTTAAATAGAACGGTTGTTACTGAAGGATTAGAGCAAGGCGATACCATCGCGCTGACCACA CCGCCGAAGAGGAATCGAGT
Downstream 100 bases:
>100_bases TGGTTGCGTACTATTAAAATAACCCGCGATAACCTCGCGGGTTATTTTTTGTCTTTTTTGAGTAATCTTCTTTTGAAAAA GGCTGACGAAGTTGTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTANRAPVKLEAQFNKGSMSPSRLPTSVYWEGIKQAFDEMRHHKLRTSLTLLGMIFGVGAVIAMLSVGEGAEREALKMIE SMGVKNLVVNARSAEGDALKSIREHSIGLSIRDVESARDTLPFIDNWSAEKNVKVFSLFSLKGRSDAQVVGVTPSYFDLS SLPLGEGRTFNDKDEDYYQQVAVLGPEAARSLFPQGSAIGNLVKVNHQWFTVVGVLSEKESSKSSIQGVKLGGERNQVFI PLTTALKKMQFNSLESELDAFKLALADGVEPSLAAKSLQHLLNRRHGGEKDFDVVVPADLLAQHQKTQQIFNIVMACVAG ISLLVGGIGIMNIMLATILERTGEIGLLRALGAKRKDIARQFLIESIAISATGGIIGIGVGLLLALIISSAAGWPVAWSP FAILLALGVCMTIGVGFGLYPANKAAKLDPIVALQRD
Sequences:
>Translated_437_residues MTANRAPVKLEAQFNKGSMSPSRLPTSVYWEGIKQAFDEMRHHKLRTSLTLLGMIFGVGAVIAMLSVGEGAEREALKMIE SMGVKNLVVNARSAEGDALKSIREHSIGLSIRDVESARDTLPFIDNWSAEKNVKVFSLFSLKGRSDAQVVGVTPSYFDLS SLPLGEGRTFNDKDEDYYQQVAVLGPEAARSLFPQGSAIGNLVKVNHQWFTVVGVLSEKESSKSSIQGVKLGGERNQVFI PLTTALKKMQFNSLESELDAFKLALADGVEPSLAAKSLQHLLNRRHGGEKDFDVVVPADLLAQHQKTQQIFNIVMACVAG ISLLVGGIGIMNIMLATILERTGEIGLLRALGAKRKDIARQFLIESIAISATGGIIGIGVGLLLALIISSAAGWPVAWSP FAILLALGVCMTIGVGFGLYPANKAAKLDPIVALQRD >Mature_436_residues TANRAPVKLEAQFNKGSMSPSRLPTSVYWEGIKQAFDEMRHHKLRTSLTLLGMIFGVGAVIAMLSVGEGAEREALKMIES MGVKNLVVNARSAEGDALKSIREHSIGLSIRDVESARDTLPFIDNWSAEKNVKVFSLFSLKGRSDAQVVGVTPSYFDLSS LPLGEGRTFNDKDEDYYQQVAVLGPEAARSLFPQGSAIGNLVKVNHQWFTVVGVLSEKESSKSSIQGVKLGGERNQVFIP LTTALKKMQFNSLESELDAFKLALADGVEPSLAAKSLQHLLNRRHGGEKDFDVVVPADLLAQHQKTQQIFNIVMACVAGI SLLVGGIGIMNIMLATILERTGEIGLLRALGAKRKDIARQFLIESIAISATGGIIGIGVGLLLALIISSAAGWPVAWSPF AILLALGVCMTIGVGFGLYPANKAAKLDPIVALQRD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=425, Percent_Identity=31.7647058823529, Blast_Score=181, Evalue=9e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 46980; Mature: 46849
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANRAPVKLEAQFNKGSMSPSRLPTSVYWEGIKQAFDEMRHHKLRTSLTLLGMIFGVGA CCCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAMLSVGEGAEREALKMIESMGVKNLVVNARSAEGDALKSIREHSIGLSIRDVESARDT HHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCCCEEEEHHHHHHC LPFIDNWSAEKNVKVFSLFSLKGRSDAQVVGVTPSYFDLSSLPLGEGRTFNDKDEDYYQQ CCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH VAVLGPEAARSLFPQGSAIGNLVKVNHQWFTVVGVLSEKESSKSSIQGVKLGGERNQVFI HHHCCHHHHHHHCCCCCCCCCEEEECCCCEEEEEEHHCCCCCHHHCCCEEECCCCCEEEE PLTTALKKMQFNSLESELDAFKLALADGVEPSLAAKSLQHLLNRRHGGEKDFDVVVPADL EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECHHH LAQHQKTQQIFNIVMACVAGISLLVGGIGIMNIMLATILERTGEIGLLRALGAKRKDIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH QFLIESIAISATGGIIGIGVGLLLALIISSAAGWPVAWSPFAILLALGVCMTIGVGFGLY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PANKAAKLDPIVALQRD CCCCCCCCCCEEEEECC >Mature Secondary Structure TANRAPVKLEAQFNKGSMSPSRLPTSVYWEGIKQAFDEMRHHKLRTSLTLLGMIFGVGA CCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAMLSVGEGAEREALKMIESMGVKNLVVNARSAEGDALKSIREHSIGLSIRDVESARDT HHHHHHCCCCCHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCCCEEEEHHHHHHC LPFIDNWSAEKNVKVFSLFSLKGRSDAQVVGVTPSYFDLSSLPLGEGRTFNDKDEDYYQQ CCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH VAVLGPEAARSLFPQGSAIGNLVKVNHQWFTVVGVLSEKESSKSSIQGVKLGGERNQVFI HHHCCHHHHHHHCCCCCCCCCEEEECCCCEEEEEEHHCCCCCHHHCCCEEECCCCCEEEE PLTTALKKMQFNSLESELDAFKLALADGVEPSLAAKSLQHLLNRRHGGEKDFDVVVPADL EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECHHH LAQHQKTQQIFNIVMACVAGISLLVGGIGIMNIMLATILERTGEIGLLRALGAKRKDIAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH QFLIESIAISATGGIIGIGVGLLLALIISSAAGWPVAWSPFAILLALGVCMTIGVGFGLY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PANKAAKLDPIVALQRD CCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA