Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961095
Identifier: 157961095
GI number: 157961095
Start: 1539298
End: 1540548
Strand: Direct
Name: 157961095
Synonym: Spea_1267
Alternate gene names: NA
Gene position: 1539298-1540548 (Clockwise)
Preceding gene: 157961094
Following gene: 157961096
Centisome position: 29.75
GC content: 40.61
Gene sequence:
>1251_bases GTGAGTCGACAATCCAGTATGATTGGTTGGATAGATTTCTCATCTATAGAACGGGACCGTGTATCGCAAGTGCTATCAAT GTTACAAGAGAAAGGTACATTGGATGAGTTAGGCATAGGGCAAATACGAGATGCCTTTGCCGACCAGCTTTTTCCGGGCT TTTCAACTATCCAAACCCGTGCCAAATACTTTGTCACTATCCCGTATATCTTTTATGACTACCGTAAGTTAGAGCTGCAT GAGAGACCTCCTCTGGATGAATATATTAACCAGCAGGAAGATAAGCTTGCTATATGTTTAGTTGAAAACCATAGGCATGA CATGCCCAAAGGGATCATTGGAAAAGACAGCTTAGAAAAGGGAGTTGCTCGAAAGCCATCTTCGGTCTATTGGAATGGGG TACGCCAGTTGTCTATTGCTAATACGGAGCTTTCTTTACGAGAGTTTACTAACCAGTATCAAGCGTTAGCGAACAAAAAG AGTGAAACTCATGTAGATGACGATGAGCTGCACTCTGATATAGCACATCAAATGACAAAACCTGATGGTTATAATGAATC TTGGTTAAACCAAGTATCAATAGATCTCACCCGTAAAGAAGCTGAATTCCTAAAAAACAAATTACAGCTATCGAGTAAAA TTGAACATAGTGTTCCTGCTCAACTATTTAAGCACAACCTAGTTGGTGATGCGTTACAAATGGCTGATATGTTGACCAAT GATGCATGGCAGGCCGAAGCCCTTTATGAAAAGTTAAAAGACTCACCAATTTCCTCCCAAACGAAAACATGTTTTGAAAA AGCGCTGCAATTTAGTTTTGTTCTTGAAGGGGCGCATATTCGTTACAACATTCTCATAGCTCATCGCGCCAAAAATACCG AACAGATTGAACTGTTGAGTGAAGAGTTTGATGTTTGGTTGAATCATGCTAGTAAACAGTTGACTAGTTTTGAGCAGCAA AGCATTGATAGTTGGTATGATTTTGCTTTCGGTCCATATAAAAATGCAAACAATCGAACACGTCAGTTTATCGAAAGCTG GTGTAGCTTGATACGTGAGAATGCTTCAGTAGATAAATTGAGTGCATGTGTGAAGCAGCAAGCCATAGCAAATAAAGGGG CTCGGTGTTTGTTGAGAAAAGCGCTTAATGAAAACCAAAAGTGGGTCGGAATGCGCAAACTAGAATTTCGTTGGCCTTCT GCCAAGGTTATTTTACAAGATATCCAGGAGGGACTAGATGTTAGCGCCTGA
Upstream 100 bases:
>100_bases AGCTGACTAAAAGCGGAAGTAGTAAGAATAAGGTTGCGAAGAAGACTTCAGCTTAAAACAGTTTTTTGGGTTAATTTAAA TCGTAAAATGTGGAGTAACA
Downstream 100 bases:
>100_bases TAAAAATCGCCTGGACTATGGTGAACAGCTTATCGCACCAGAAGGTTATGAGCTTACTCATGCTATCGCGACGACTTATA GCTTGGATTTAAATACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSRQSSMIGWIDFSSIERDRVSQVLSMLQEKGTLDELGIGQIRDAFADQLFPGFSTIQTRAKYFVTIPYIFYDYRKLELH ERPPLDEYINQQEDKLAICLVENHRHDMPKGIIGKDSLEKGVARKPSSVYWNGVRQLSIANTELSLREFTNQYQALANKK SETHVDDDELHSDIAHQMTKPDGYNESWLNQVSIDLTRKEAEFLKNKLQLSSKIEHSVPAQLFKHNLVGDALQMADMLTN DAWQAEALYEKLKDSPISSQTKTCFEKALQFSFVLEGAHIRYNILIAHRAKNTEQIELLSEEFDVWLNHASKQLTSFEQQ SIDSWYDFAFGPYKNANNRTRQFIESWCSLIRENASVDKLSACVKQQAIANKGARCLLRKALNENQKWVGMRKLEFRWPS AKVILQDIQEGLDVSA
Sequences:
>Translated_416_residues MSRQSSMIGWIDFSSIERDRVSQVLSMLQEKGTLDELGIGQIRDAFADQLFPGFSTIQTRAKYFVTIPYIFYDYRKLELH ERPPLDEYINQQEDKLAICLVENHRHDMPKGIIGKDSLEKGVARKPSSVYWNGVRQLSIANTELSLREFTNQYQALANKK SETHVDDDELHSDIAHQMTKPDGYNESWLNQVSIDLTRKEAEFLKNKLQLSSKIEHSVPAQLFKHNLVGDALQMADMLTN DAWQAEALYEKLKDSPISSQTKTCFEKALQFSFVLEGAHIRYNILIAHRAKNTEQIELLSEEFDVWLNHASKQLTSFEQQ SIDSWYDFAFGPYKNANNRTRQFIESWCSLIRENASVDKLSACVKQQAIANKGARCLLRKALNENQKWVGMRKLEFRWPS AKVILQDIQEGLDVSA >Mature_415_residues SRQSSMIGWIDFSSIERDRVSQVLSMLQEKGTLDELGIGQIRDAFADQLFPGFSTIQTRAKYFVTIPYIFYDYRKLELHE RPPLDEYINQQEDKLAICLVENHRHDMPKGIIGKDSLEKGVARKPSSVYWNGVRQLSIANTELSLREFTNQYQALANKKS ETHVDDDELHSDIAHQMTKPDGYNESWLNQVSIDLTRKEAEFLKNKLQLSSKIEHSVPAQLFKHNLVGDALQMADMLTND AWQAEALYEKLKDSPISSQTKTCFEKALQFSFVLEGAHIRYNILIAHRAKNTEQIELLSEEFDVWLNHASKQLTSFEQQS IDSWYDFAFGPYKNANNRTRQFIESWCSLIRENASVDKLSACVKQQAIANKGARCLLRKALNENQKWVGMRKLEFRWPSA KVILQDIQEGLDVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47949; Mature: 47818
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQSSMIGWIDFSSIERDRVSQVLSMLQEKGTLDELGIGQIRDAFADQLFPGFSTIQTR CCCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC AKYFVTIPYIFYDYRKLELHERPPLDEYINQQEDKLAICLVENHRHDMPKGIIGKDSLEK CCEEEEEHHHHHHHHHEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH GVARKPSSVYWNGVRQLSIANTELSLREFTNQYQALANKKSETHVDDDELHSDIAHQMTK HHCCCCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC PDGYNESWLNQVSIDLTRKEAEFLKNKLQLSSKIEHSVPAQLFKHNLVGDALQMADMLTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DAWQAEALYEKLKDSPISSQTKTCFEKALQFSFVLEGAHIRYNILIAHRAKNTEQIELLS CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCEEEEEEEEEECCCCCHHHHHHH EEFDVWLNHASKQLTSFEQQSIDSWYDFAFGPYKNANNRTRQFIESWCSLIRENASVDKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH SACVKQQAIANKGARCLLRKALNENQKWVGMRKLEFRWPSAKVILQDIQEGLDVSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRQSSMIGWIDFSSIERDRVSQVLSMLQEKGTLDELGIGQIRDAFADQLFPGFSTIQTR CCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC AKYFVTIPYIFYDYRKLELHERPPLDEYINQQEDKLAICLVENHRHDMPKGIIGKDSLEK CCEEEEEHHHHHHHHHEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH GVARKPSSVYWNGVRQLSIANTELSLREFTNQYQALANKKSETHVDDDELHSDIAHQMTK HHCCCCCCHHHCCHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC PDGYNESWLNQVSIDLTRKEAEFLKNKLQLSSKIEHSVPAQLFKHNLVGDALQMADMLTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DAWQAEALYEKLKDSPISSQTKTCFEKALQFSFVLEGAHIRYNILIAHRAKNTEQIELLS CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCEEEEEEEEEECCCCCHHHHHHH EEFDVWLNHASKQLTSFEQQSIDSWYDFAFGPYKNANNRTRQFIESWCSLIRENASVDKL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH SACVKQQAIANKGARCLLRKALNENQKWVGMRKLEFRWPSAKVILQDIQEGLDVSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA