Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961096
Identifier: 157961096
GI number: 157961096
Start: 1540535
End: 1542358
Strand: Direct
Name: 157961096
Synonym: Spea_1268
Alternate gene names: NA
Gene position: 1540535-1542358 (Clockwise)
Preceding gene: 157961095
Following gene: 157961097
Centisome position: 29.77
GC content: 42.49
Gene sequence:
>1824_bases ATGTTAGCGCCTGATAAAAATCGCCTGGACTATGGTGAACAGCTTATCGCACCAGAAGGTTATGAGCTTACTCATGCTAT CGCGACGACTTATAGCTTGGATTTAAATACCTTGTTGACTGTGCCAATTGCCATGTGTTTTGGCCATACCTTAGAAGGTT CTGTTGAGCACATGAGAATTGCGTTATTAGAAGCTTTAGGAGTGTTAGGCGACAAACTCACGGTTTTCTACCAACAAGGC AATATTAAGTTACCAGACAAGTACAACAGCTTATTTGGACTGTTGGAAGACAGCCTAGTACCTGTAGTCCCAAATGCTGG CGAATCGGACTCAGCGTTTTCGTCATTTCACCCAAAATTGTGGTTGCTTCGATTCAAAAGCCCAGATGAAAATCAAAATG TGAAATACCGTTTAATAGTTTTGTCTCGCAATTTAACTTTTGATCGAAGTTGGGATCTAAGCGCTGTAATTAACGGAGAA TCAAGAGGGAAGCGAAAGCCAGCCAATAGACCGTTGATTGACTTTTTTGATGAGATTTATAGTAGTTCATCAACGCAATC ATTTGATGATGTGATTGACCGAGAAGAGTTGGTTAGAGTGCTTTGGCAGCGGCCTGATAACATCAACGAACTCGGCTTTC TCTCTACCATTTTTGATGATAGCAATAAACGACAGCACCCCATCCGTTTAGAACATAGTAATCAAACTATGCTTGCTGTT TCTCCTTTTATCCGGGGGGGTGGCAAAGTGGGAGCTTTAGATTGGCTCAGTGCCTTTGCCCCTGATCTGCAGCGTTACTT ATTTAGTCGTAAAGAAGAACTCGACATGGCTGGTGAGAAAGCGCTGGATGGTTGGCACTGTTATGCGCTTAATGAGCACC TCGTCGATGCAGAAGAAAATGAGGAAATGGACCAGTCTCCATTTGTAGAAAACGATCTCAACTTACATGCTAAGCTATTA GTTGTCGACGAAACTGATTCAACATCCAGCTGGCACCTTGGTTCGGCAAACACAACTCAAGCGGCTATGGGAGACGCCTT TCATTCCCCGAGAAATAGTGAATTCATGCTTCGTTTAACGGGTTCTAAAGAGAAAATTGGTGTTCATTCACTTATCGAAC AATGGGTTAATGAGCACGGTACAGGCTTATTCACAAAGCATGAGTTCAGTGAACTAGAACAAACTGAAGACGAGAGCTCT GACCGAACACTCCGTCTATTAGAGTTCAGCCTAATTAAAGCAGATTGGAAACTTGAAGTTGATACGAGTGATGATGACGA ATATCAGTTGACCTTAAACGGTACTCAGGTTGATATCCCCCCGAGCTTTGAGGTTAAGGTTTCTATATTGAGTGCGTCTC AGCCTCGTACATTAGCTCGTGAGATTATCTGGGATAGTCTTAAACCCTCCCAAATTAGTGCGCTAATTCATTTTGAGATA TCGGAAAACGATACTGTAGTTAAGAACTTAGTAGTACAAGCTGAAATTACGCTTAATTGTAAATTGGACCGTGGAAAGGC AATTACCAATGAATTACTCGAGAATGGCTCACAGTTCATGAGCTATATAGCGATGCTGTTACATATCGACCCGAGTAAGC AAGATTTGATGAACAGTGCGAGAAAGGAGTTAGGTGAGGGGGCTGGTAGTATGTTCTTTAGTAAAGACAGCGTGATCTAC GAAAAACTGATGCGAGCGGCTGCATTAAGTCCGGAGCTGCTAGAAAGAATTGATCGCTTACAAGCGCAAGTCGATGAAAA GATCATTCCAGATGAGTTCAAGTTGTTATGGGATGTGTTCTCATCATTTGTGCCATCTAAGTAG
Upstream 100 bases:
>100_bases AAAGCGCTTAATGAAAACCAAAAGTGGGTCGGAATGCGCAAACTAGAATTTCGTTGGCCTTCTGCCAAGGTTATTTTACA AGATATCCAGGAGGGACTAG
Downstream 100 bases:
>100_bases TACTTCATAAATAGTCGCAAGAATAAGAAGATAATTAAGTGATGACACAAGCGATCGTAGAACAACTGAACGGTGTATTA GCTGGTCTTAAAGATTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MLAPDKNRLDYGEQLIAPEGYELTHAIATTYSLDLNTLLTVPIAMCFGHTLEGSVEHMRIALLEALGVLGDKLTVFYQQG NIKLPDKYNSLFGLLEDSLVPVVPNAGESDSAFSSFHPKLWLLRFKSPDENQNVKYRLIVLSRNLTFDRSWDLSAVINGE SRGKRKPANRPLIDFFDEIYSSSSTQSFDDVIDREELVRVLWQRPDNINELGFLSTIFDDSNKRQHPIRLEHSNQTMLAV SPFIRGGGKVGALDWLSAFAPDLQRYLFSRKEELDMAGEKALDGWHCYALNEHLVDAEENEEMDQSPFVENDLNLHAKLL VVDETDSTSSWHLGSANTTQAAMGDAFHSPRNSEFMLRLTGSKEKIGVHSLIEQWVNEHGTGLFTKHEFSELEQTEDESS DRTLRLLEFSLIKADWKLEVDTSDDDEYQLTLNGTQVDIPPSFEVKVSILSASQPRTLAREIIWDSLKPSQISALIHFEI SENDTVVKNLVVQAEITLNCKLDRGKAITNELLENGSQFMSYIAMLLHIDPSKQDLMNSARKELGEGAGSMFFSKDSVIY EKLMRAAALSPELLERIDRLQAQVDEKIIPDEFKLLWDVFSSFVPSK
Sequences:
>Translated_607_residues MLAPDKNRLDYGEQLIAPEGYELTHAIATTYSLDLNTLLTVPIAMCFGHTLEGSVEHMRIALLEALGVLGDKLTVFYQQG NIKLPDKYNSLFGLLEDSLVPVVPNAGESDSAFSSFHPKLWLLRFKSPDENQNVKYRLIVLSRNLTFDRSWDLSAVINGE SRGKRKPANRPLIDFFDEIYSSSSTQSFDDVIDREELVRVLWQRPDNINELGFLSTIFDDSNKRQHPIRLEHSNQTMLAV SPFIRGGGKVGALDWLSAFAPDLQRYLFSRKEELDMAGEKALDGWHCYALNEHLVDAEENEEMDQSPFVENDLNLHAKLL VVDETDSTSSWHLGSANTTQAAMGDAFHSPRNSEFMLRLTGSKEKIGVHSLIEQWVNEHGTGLFTKHEFSELEQTEDESS DRTLRLLEFSLIKADWKLEVDTSDDDEYQLTLNGTQVDIPPSFEVKVSILSASQPRTLAREIIWDSLKPSQISALIHFEI SENDTVVKNLVVQAEITLNCKLDRGKAITNELLENGSQFMSYIAMLLHIDPSKQDLMNSARKELGEGAGSMFFSKDSVIY EKLMRAAALSPELLERIDRLQAQVDEKIIPDEFKLLWDVFSSFVPSK >Mature_607_residues MLAPDKNRLDYGEQLIAPEGYELTHAIATTYSLDLNTLLTVPIAMCFGHTLEGSVEHMRIALLEALGVLGDKLTVFYQQG NIKLPDKYNSLFGLLEDSLVPVVPNAGESDSAFSSFHPKLWLLRFKSPDENQNVKYRLIVLSRNLTFDRSWDLSAVINGE SRGKRKPANRPLIDFFDEIYSSSSTQSFDDVIDREELVRVLWQRPDNINELGFLSTIFDDSNKRQHPIRLEHSNQTMLAV SPFIRGGGKVGALDWLSAFAPDLQRYLFSRKEELDMAGEKALDGWHCYALNEHLVDAEENEEMDQSPFVENDLNLHAKLL VVDETDSTSSWHLGSANTTQAAMGDAFHSPRNSEFMLRLTGSKEKIGVHSLIEQWVNEHGTGLFTKHEFSELEQTEDESS DRTLRLLEFSLIKADWKLEVDTSDDDEYQLTLNGTQVDIPPSFEVKVSILSASQPRTLAREIIWDSLKPSQISALIHFEI SENDTVVKNLVVQAEITLNCKLDRGKAITNELLENGSQFMSYIAMLLHIDPSKQDLMNSARKELGEGAGSMFFSKDSVIY EKLMRAAALSPELLERIDRLQAQVDEKIIPDEFKLLWDVFSSFVPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68640; Mature: 68640
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPDKNRLDYGEQLIAPEGYELTHAIATTYSLDLNTLLTVPIAMCFGHTLEGSVEHMRI CCCCCCCCCCCCCHHCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCHHHHHH ALLEALGVLGDKLTVFYQQGNIKLPDKYNSLFGLLEDSLVPVVPNAGESDSAFSSFHPKL HHHHHHHHCCCCEEEEEECCCEECCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHCCCEE WLLRFKSPDENQNVKYRLIVLSRNLTFDRSWDLSAVINGESRGKRKPANRPLIDFFDEIY EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH SSSSTQSFDDVIDREELVRVLWQRPDNINELGFLSTIFDDSNKRQHPIRLEHSNQTMLAV CCCCCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEE SPFIRGGGKVGALDWLSAFAPDLQRYLFSRKEELDMAGEKALDGWHCYALNEHLVDAEEN EHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCEEEEEECCCCCCCCCC EEMDQSPFVENDLNLHAKLLVVDETDSTSSWHLGSANTTQAAMGDAFHSPRNSEFMLRLT CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEEEEE GSKEKIGVHSLIEQWVNEHGTGLFTKHEFSELEQTEDESSDRTLRLLEFSLIKADWKLEV CCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEEHHEEECCEEEEE DTSDDDEYQLTLNGTQVDIPPSFEVKVSILSASQPRTLAREIIWDSLKPSQISALIHFEI CCCCCCCEEEEECCEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEE SENDTVVKNLVVQAEITLNCKLDRGKAITNELLENGSQFMSYIAMLLHIDPSKQDLMNSA CCCCCEEHHEEEEEEEEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH RKELGEGAGSMFFSKDSVIYEKLMRAAALSPELLERIDRLQAQVDEKIIPDEFKLLWDVF HHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SSFVPSK HHHCCCC >Mature Secondary Structure MLAPDKNRLDYGEQLIAPEGYELTHAIATTYSLDLNTLLTVPIAMCFGHTLEGSVEHMRI CCCCCCCCCCCCCHHCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCHHHHHH ALLEALGVLGDKLTVFYQQGNIKLPDKYNSLFGLLEDSLVPVVPNAGESDSAFSSFHPKL HHHHHHHHCCCCEEEEEECCCEECCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHCCCEE WLLRFKSPDENQNVKYRLIVLSRNLTFDRSWDLSAVINGESRGKRKPANRPLIDFFDEIY EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH SSSSTQSFDDVIDREELVRVLWQRPDNINELGFLSTIFDDSNKRQHPIRLEHSNQTMLAV CCCCCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEE SPFIRGGGKVGALDWLSAFAPDLQRYLFSRKEELDMAGEKALDGWHCYALNEHLVDAEEN EHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHCCCCEEEEEECCCCCCCCCC EEMDQSPFVENDLNLHAKLLVVDETDSTSSWHLGSANTTQAAMGDAFHSPRNSEFMLRLT CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHCCCCCCCEEEEEE GSKEKIGVHSLIEQWVNEHGTGLFTKHEFSELEQTEDESSDRTLRLLEFSLIKADWKLEV CCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEEHHEEECCEEEEE DTSDDDEYQLTLNGTQVDIPPSFEVKVSILSASQPRTLAREIIWDSLKPSQISALIHFEI CCCCCCCEEEEECCEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEE SENDTVVKNLVVQAEITLNCKLDRGKAITNELLENGSQFMSYIAMLLHIDPSKQDLMNSA CCCCCEEHHEEEEEEEEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHH RKELGEGAGSMFFSKDSVIYEKLMRAAALSPELLERIDRLQAQVDEKIIPDEFKLLWDVF HHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SSFVPSK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA