Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961068
Identifier: 157961068
GI number: 157961068
Start: 1513360
End: 1514181
Strand: Direct
Name: 157961068
Synonym: Spea_1240
Alternate gene names: NA
Gene position: 1513360-1514181 (Clockwise)
Preceding gene: 157961067
Following gene: 157961070
Centisome position: 29.25
GC content: 43.31
Gene sequence:
>822_bases GTGAAAATACTTACTGCTGTATTACTCATGATGGTCACTCAATCTGCGGCCTTTGCCAGTGATGAGTATGAGGTTGGGCC CGACTCTTATGATGAGGGCAAAGATGAGTGGAACTATTTAATCGCCTTTCCCATGGTTTGGGCGCCTGATATTTCGGGCT CAATCTCAGCCGATGCAGATAGAGTCGATATCGATGTCCCTTTCAAAAATATCATCGACAACCTTAACTTCGGTGTGATT GGTGAGCTTTACGCACAAAAAGGCGATTGGCTCTATAGCCTTAGGATTAACTATTTAAGAGTTAAAAGCGATAGCCAAAC AGAGGGTCTTAAAGGTCCGATTACTGGCGGTATTATCTCACCTGGACATAATATCGAAACCGACATGCACTTAGCCGTTA ATGACTTTCTAGCAGGCTATGAAGTTACGCCGGGTTTACGCTTATTTACCGGCGTACGCCATGTATTCAGTAAAATTGAT CTTAATGTCAAACCCTTAAGTGACGATGGACTCATTCATATTAATGCTAATATTCCTATTGCTGATGAGCATCTTTTCGA TTGGTTAGTAGGTGTGACCTACCGTTACTGGCTATCTGAGTCTTGGGGCGTTTCTGTTGGCGCTGATACTAAGATCTACG GTGATAATGACAGAGACTATGGCTTTAATGCTTCGGCGTTATACCGTTTCGGGGATCTGCATAATGTTTGGATAGGCTAT CGCTACTTGCAAATAGGTAACGACAGTGAGGTCGATGGGGTTCAGTATGAGATGGACTTTATTGAGAAAGGCCCACAAAT TGGCTGGGCCTTTAGTTTTTAA
Upstream 100 bases:
>100_bases CCAAAAGCCACGCTGGTCAGTAATAAAAGATGTGTTACATTGGGTTGATTAAAAATAATAATAACAACGCGATAGTCATA AATGACAAGGAGTATTGTTG
Downstream 100 bases:
>100_bases TCTGTAACAAGGTTAGGCTTAGCTGATAGTACAAAGCTATAGTACAAAGCTATAGCTAAGCACCCCATAGCCATGCCAGC TGTTTGGGTCGGGCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKILTAVLLMMVTQSAAFASDEYEVGPDSYDEGKDEWNYLIAFPMVWAPDISGSISADADRVDIDVPFKNIIDNLNFGVI GELYAQKGDWLYSLRINYLRVKSDSQTEGLKGPITGGIISPGHNIETDMHLAVNDFLAGYEVTPGLRLFTGVRHVFSKID LNVKPLSDDGLIHINANIPIADEHLFDWLVGVTYRYWLSESWGVSVGADTKIYGDNDRDYGFNASALYRFGDLHNVWIGY RYLQIGNDSEVDGVQYEMDFIEKGPQIGWAFSF
Sequences:
>Translated_273_residues MKILTAVLLMMVTQSAAFASDEYEVGPDSYDEGKDEWNYLIAFPMVWAPDISGSISADADRVDIDVPFKNIIDNLNFGVI GELYAQKGDWLYSLRINYLRVKSDSQTEGLKGPITGGIISPGHNIETDMHLAVNDFLAGYEVTPGLRLFTGVRHVFSKID LNVKPLSDDGLIHINANIPIADEHLFDWLVGVTYRYWLSESWGVSVGADTKIYGDNDRDYGFNASALYRFGDLHNVWIGY RYLQIGNDSEVDGVQYEMDFIEKGPQIGWAFSF >Mature_273_residues MKILTAVLLMMVTQSAAFASDEYEVGPDSYDEGKDEWNYLIAFPMVWAPDISGSISADADRVDIDVPFKNIIDNLNFGVI GELYAQKGDWLYSLRINYLRVKSDSQTEGLKGPITGGIISPGHNIETDMHLAVNDFLAGYEVTPGLRLFTGVRHVFSKID LNVKPLSDDGLIHINANIPIADEHLFDWLVGVTYRYWLSESWGVSVGADTKIYGDNDRDYGFNASALYRFGDLHNVWIGY RYLQIGNDSEVDGVQYEMDFIEKGPQIGWAFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30647; Mature: 30647
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTAVLLMMVTQSAAFASDEYEVGPDSYDEGKDEWNYLIAFPMVWAPDISGSISADAD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC RVDIDVPFKNIIDNLNFGVIGELYAQKGDWLYSLRINYLRVKSDSQTEGLKGPITGGIIS EEEEECCHHHHHCCCCCCEEHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEC PGHNIETDMHLAVNDFLAGYEVTPGLRLFTGVRHVFSKIDLNVKPLSDDGLIHINANIPI CCCCCCCCEEEEEHHHHCCEECCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCC ADEHLFDWLVGVTYRYWLSESWGVSVGADTKIYGDNDRDYGFNASALYRFGDLHNVWIGY CHHHHHHHHHHHHHEEECCCCCCEEECCCEEEECCCCCCCCCCHHHHEEECCCCEEEEEE RYLQIGNDSEVDGVQYEMDFIEKGPQIGWAFSF EEEEECCCCCCCCEEEEEHHHHCCCCCEEEECC >Mature Secondary Structure MKILTAVLLMMVTQSAAFASDEYEVGPDSYDEGKDEWNYLIAFPMVWAPDISGSISADAD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC RVDIDVPFKNIIDNLNFGVIGELYAQKGDWLYSLRINYLRVKSDSQTEGLKGPITGGIIS EEEEECCHHHHHCCCCCCEEHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCEEC PGHNIETDMHLAVNDFLAGYEVTPGLRLFTGVRHVFSKIDLNVKPLSDDGLIHINANIPI CCCCCCCCEEEEEHHHHCCEECCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCC ADEHLFDWLVGVTYRYWLSESWGVSVGADTKIYGDNDRDYGFNASALYRFGDLHNVWIGY CHHHHHHHHHHHHHEEECCCCCCEEECCCEEEECCCCCCCCCCHHHHEEECCCCEEEEEE RYLQIGNDSEVDGVQYEMDFIEKGPQIGWAFSF EEEEECCCCCCCCEEEEEHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA