Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is pheC [H]
Identifier: 157961067
GI number: 157961067
Start: 1511101
End: 1513311
Strand: Direct
Name: pheC [H]
Synonym: Spea_1239
Alternate gene names: 157961067
Gene position: 1511101-1513311 (Clockwise)
Preceding gene: 157961066
Following gene: 157961068
Centisome position: 29.2
GC content: 43.92
Gene sequence:
>2211_bases ATGAGCAGTAAAACGGATACTATAGAGCCAGAAGCGAACGATACCGAGCAACAAAAACCAAAGCAGAAGATGAGTATGTC GACTCTGGTTTTATTGTCGTTTGCGGCAGGTATTATTGCAGGGCTATTTTTTGGTGAGATGTTGGCGTGGATGTCTGTCA TTGGTGATGCATTTATTAAACTGCTGCAGATGACGATTATTCCCTACATCATAGTGTCCTTGGTCTCGAGCCTCGGTAGT TTGACCATGGAACAGGCTAAATCTTTGGGGGTGAAGGTTGGTAAGCTAATGTTGGTGATCTGGGCCTTTGGTCTACTGAC TATGTATCTTATCAAGTACACCTTTCCCGACTGGCAGGCGGGGGAATTTTTTAGCTTAACAGCTCTAGAAGATCCCAATT CGGTAAACTTACTCGATATCTATATTCCTTCCAACCCGTTCTTTTCATTGTCGAACAGTTATATCCCTGCAATTGTGCTG TTCTGTGTCGCCACGGGTATTGCGCTGATCTCTATCGATAATAAAGACTCGCTTATGAAGCCGATGCAGCTGCTTGGAGA GTCGTTTAATAAGGTGACTCAAAGCATTGTTAAATTAATGCCGATTGGTATCTTCGCCATGACAGCGGCGACAGCGGGCA CCATGGACTTTGACGAGTTTCAAAAGTTACAGGTCTATTTTGTAGCCCATGTGGTGATGACTATTATCCTGACTTACTGG GTCTTGCCGGGTATTTTAATGGTGATCACTCCCTTCTCTTATCGAGATATCACGGGGATTGCTAAAGATGCGATGATCAC GGCATTTGCTGCGGGCAATATTTTTATCGTTATTCCTATTCTCATTGAGCGTACCAAAGAGTTATTCCATAAATATAATA TCGGCAGCCAGCAGAGTGATGACTATGCCAACATCATTATTCCTGTTGTGTTTAGCTTCCCAAATCTAGGCAAATTACTC ACCATAGTCTTTGTGCTTTTTGCGGCTTGGTTTTCAGGGGCTGAACTGGATTTTTTAACTTACTTGCCCATGTCATTAAA TGGTTTAGTGAGCCTGTTTGGTAGTGTTTATTTGACCATACCTATGCTACTTGATTCTCTAGAGCTTTCCTCCGATCTGT TTCAGTTGTATATGGTCTCTAGTCTGTTCACCAGTCGTTTTACCTCTTTGCTTGCTGCGATGAATATTTTCATCTTGGCT ATAGGCGGTACGGCGATGTTGGTCGGTATCGCTAAAGTGAGCATGAAGCGATTAGCAATTGTAAGCCTACTGACTCCAGT GGTGTTCGGTGTGAGTTTACTGGCAACGAGCTGGTTACTGAGCTCTATCGTCGATACCGAGTATGAGATGGATGAAGTCG TGGCGCAGATGAGTGCGGCAGAGAAAGTGCCTGATCAAGTTACCGCCTATAACTGGGCTGACTTAGCTCAAGCTGATGGA CCTCGCAACATGCAGCAGATTAGAGAGAGCGGTGTGATCAGAGTCGGCTACAACCCGACGCAGGTTCCTTTCTCTTTTTA TAATGCCGATCAACAGCTAGTAGGATTTGATGTTGAGCTAATGAAAAAGTTAGCGCTAGAGTTAGAGCTTAAAATTGCAT TTGTACCTTATACCTTCAGTAACGTTTTAGAGGGGATCAATCAAGGTCAGTTTGATATTGCGATATCGGGTTTGCAGATG ACAACCAAGCGAATCGAGCTGGTGGGCTTTACCACTCCTGTGCTCGACCTGCACTACGCGTTTGTGGTGAAGGATCATCG CGTTGATGAGTTTAAAACTGACAAGTTAATTCGTGATGCCGACAAGATTCGTATCGCCACAGTGGGTCGTTATTCAATTA TTCCGCAGTTAGAAGAGAAGTTTCCCAATATCGAGTTTGTGACTATTCAGTCGGACCGATTGTTTTTTGAAGATGACGGC AAGACCTGGGATGGGCTTATGATAAGTCTCGAAGCGGGTAAAACTTGGACAATCTTATACCCAGATTACGCCACACTTTA TAATCGTGAAGAGATTAAGTCGTTTCCCGCTTCCTACGCAGTGGCTCGTGACAACGCCTCGCTACAAACCTTTTTAAATA GCTGGCTTGAGCTACAAAAGTCATCAGGTTATGTCGACAAACTGTATGGTTATTGGATTTTAGGTGAGAATGCCAAGCCC CAAAAGCCACGCTGGTCAGTAATAAAAGATGTGTTACATTGGGTTGATTAA
Upstream 100 bases:
>100_bases CCCGAGAGAAAAGTCGAGCAATACATAGCCTGCTACCGAGAAGCCATTCAGGATTGCCAATGTGCTTGTTCATCAGTGCA GACATTACACGGAGACAGTA
Downstream 100 bases:
>100_bases AAATAATAATAACAACGCGATAGTCATAAATGACAAGGAGTATTGTTGGTGAAAATACTTACTGCTGTATTACTCATGAT GGTCACTCAATCTGCGGCCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 736; Mature: 735
Protein sequence:
>736_residues MSSKTDTIEPEANDTEQQKPKQKMSMSTLVLLSFAAGIIAGLFFGEMLAWMSVIGDAFIKLLQMTIIPYIIVSLVSSLGS LTMEQAKSLGVKVGKLMLVIWAFGLLTMYLIKYTFPDWQAGEFFSLTALEDPNSVNLLDIYIPSNPFFSLSNSYIPAIVL FCVATGIALISIDNKDSLMKPMQLLGESFNKVTQSIVKLMPIGIFAMTAATAGTMDFDEFQKLQVYFVAHVVMTIILTYW VLPGILMVITPFSYRDITGIAKDAMITAFAAGNIFIVIPILIERTKELFHKYNIGSQQSDDYANIIIPVVFSFPNLGKLL TIVFVLFAAWFSGAELDFLTYLPMSLNGLVSLFGSVYLTIPMLLDSLELSSDLFQLYMVSSLFTSRFTSLLAAMNIFILA IGGTAMLVGIAKVSMKRLAIVSLLTPVVFGVSLLATSWLLSSIVDTEYEMDEVVAQMSAAEKVPDQVTAYNWADLAQADG PRNMQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALELELKIAFVPYTFSNVLEGINQGQFDIAISGLQM TTKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDADKIRIATVGRYSIIPQLEEKFPNIEFVTIQSDRLFFEDDG KTWDGLMISLEAGKTWTILYPDYATLYNREEIKSFPASYAVARDNASLQTFLNSWLELQKSSGYVDKLYGYWILGENAKP QKPRWSVIKDVLHWVD
Sequences:
>Translated_736_residues MSSKTDTIEPEANDTEQQKPKQKMSMSTLVLLSFAAGIIAGLFFGEMLAWMSVIGDAFIKLLQMTIIPYIIVSLVSSLGS LTMEQAKSLGVKVGKLMLVIWAFGLLTMYLIKYTFPDWQAGEFFSLTALEDPNSVNLLDIYIPSNPFFSLSNSYIPAIVL FCVATGIALISIDNKDSLMKPMQLLGESFNKVTQSIVKLMPIGIFAMTAATAGTMDFDEFQKLQVYFVAHVVMTIILTYW VLPGILMVITPFSYRDITGIAKDAMITAFAAGNIFIVIPILIERTKELFHKYNIGSQQSDDYANIIIPVVFSFPNLGKLL TIVFVLFAAWFSGAELDFLTYLPMSLNGLVSLFGSVYLTIPMLLDSLELSSDLFQLYMVSSLFTSRFTSLLAAMNIFILA IGGTAMLVGIAKVSMKRLAIVSLLTPVVFGVSLLATSWLLSSIVDTEYEMDEVVAQMSAAEKVPDQVTAYNWADLAQADG PRNMQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALELELKIAFVPYTFSNVLEGINQGQFDIAISGLQM TTKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDADKIRIATVGRYSIIPQLEEKFPNIEFVTIQSDRLFFEDDG KTWDGLMISLEAGKTWTILYPDYATLYNREEIKSFPASYAVARDNASLQTFLNSWLELQKSSGYVDKLYGYWILGENAKP QKPRWSVIKDVLHWVD >Mature_735_residues SSKTDTIEPEANDTEQQKPKQKMSMSTLVLLSFAAGIIAGLFFGEMLAWMSVIGDAFIKLLQMTIIPYIIVSLVSSLGSL TMEQAKSLGVKVGKLMLVIWAFGLLTMYLIKYTFPDWQAGEFFSLTALEDPNSVNLLDIYIPSNPFFSLSNSYIPAIVLF CVATGIALISIDNKDSLMKPMQLLGESFNKVTQSIVKLMPIGIFAMTAATAGTMDFDEFQKLQVYFVAHVVMTIILTYWV LPGILMVITPFSYRDITGIAKDAMITAFAAGNIFIVIPILIERTKELFHKYNIGSQQSDDYANIIIPVVFSFPNLGKLLT IVFVLFAAWFSGAELDFLTYLPMSLNGLVSLFGSVYLTIPMLLDSLELSSDLFQLYMVSSLFTSRFTSLLAAMNIFILAI GGTAMLVGIAKVSMKRLAIVSLLTPVVFGVSLLATSWLLSSIVDTEYEMDEVVAQMSAAEKVPDQVTAYNWADLAQADGP RNMQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALELELKIAFVPYTFSNVLEGINQGQFDIAISGLQMT TKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDADKIRIATVGRYSIIPQLEEKFPNIEFVTIQSDRLFFEDDGK TWDGLMISLEAGKTWTILYPDYATLYNREEIKSFPASYAVARDNASLQTFLNSWLELQKSSGYVDKLYGYWILGENAKPQ KPRWSVIKDVLHWVD
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=225, Percent_Identity=24.4444444444444, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 82313; Mature: 82182
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKTDTIEPEANDTEQQKPKQKMSMSTLVLLSFAAGIIAGLFFGEMLAWMSVIGDAFIK CCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQMTIIPYIIVSLVSSLGSLTMEQAKSLGVKVGKLMLVIWAFGLLTMYLIKYTFPDWQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEFFSLTALEDPNSVNLLDIYIPSNPFFSLSNSYIPAIVLFCVATGIALISIDNKDSLMK CCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHH PMQLLGESFNKVTQSIVKLMPIGIFAMTAATAGTMDFDEFQKLQVYFVAHVVMTIILTYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLPGILMVITPFSYRDITGIAKDAMITAFAAGNIFIVIPILIERTKELFHKYNIGSQQSD HHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCC DYANIIIPVVFSFPNLGKLLTIVFVLFAAWFSGAELDFLTYLPMSLNGLVSLFGSVYLTI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCHHHHHHHHHHHHHHHHH PMLLDSLELSSDLFQLYMVSSLFTSRFTSLLAAMNIFILAIGGTAMLVGIAKVSMKRLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH VSLLTPVVFGVSLLATSWLLSSIVDTEYEMDEVVAQMSAAEKVPDQVTAYNWADLAQADG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCC PRNMQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALELELKIAFVPYTFS CCHHHHHHHCCEEEECCCCCCCCCCEECCCCHHCCCCHHHHHHHHHEEEEEEEEECCCHH NVLEGINQGQFDIAISGLQMTTKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDA HHHHHCCCCCEEEEEECHHHHHHHEEEEECCCHHHHHHEEEEEECCCCCHHHHHHHHHCC DKIRIATVGRYSIIPQLEEKFPNIEFVTIQSDRLFFEDDGKTWDGLMISLEAGKTWTILY CCEEEEEECCHHCCCHHHHHCCCEEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEEEC PDYATLYNREEIKSFPASYAVARDNASLQTFLNSWLELQKSSGYVDKLYGYWILGENAKP CCHHHHCCHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHCEEEEECCCCCC QKPRWSVIKDVLHWVD CCCHHHHHHHHHHHCC >Mature Secondary Structure SSKTDTIEPEANDTEQQKPKQKMSMSTLVLLSFAAGIIAGLFFGEMLAWMSVIGDAFIK CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQMTIIPYIIVSLVSSLGSLTMEQAKSLGVKVGKLMLVIWAFGLLTMYLIKYTFPDWQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GEFFSLTALEDPNSVNLLDIYIPSNPFFSLSNSYIPAIVLFCVATGIALISIDNKDSLMK CCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHH PMQLLGESFNKVTQSIVKLMPIGIFAMTAATAGTMDFDEFQKLQVYFVAHVVMTIILTYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLPGILMVITPFSYRDITGIAKDAMITAFAAGNIFIVIPILIERTKELFHKYNIGSQQSD HHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCC DYANIIIPVVFSFPNLGKLLTIVFVLFAAWFSGAELDFLTYLPMSLNGLVSLFGSVYLTI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCHHHHHHHHHHHHHHHHH PMLLDSLELSSDLFQLYMVSSLFTSRFTSLLAAMNIFILAIGGTAMLVGIAKVSMKRLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHH VSLLTPVVFGVSLLATSWLLSSIVDTEYEMDEVVAQMSAAEKVPDQVTAYNWADLAQADG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCC PRNMQQIRESGVIRVGYNPTQVPFSFYNADQQLVGFDVELMKKLALELELKIAFVPYTFS CCHHHHHHHCCEEEECCCCCCCCCCEECCCCHHCCCCHHHHHHHHHEEEEEEEEECCCHH NVLEGINQGQFDIAISGLQMTTKRIELVGFTTPVLDLHYAFVVKDHRVDEFKTDKLIRDA HHHHHCCCCCEEEEEECHHHHHHHEEEEECCCHHHHHHEEEEEECCCCCHHHHHHHHHCC DKIRIATVGRYSIIPQLEEKFPNIEFVTIQSDRLFFEDDGKTWDGLMISLEAGKTWTILY CCEEEEEECCHHCCCHHHHHCCCEEEEEEECCEEEEECCCCCCCCEEEEEECCCEEEEEC PDYATLYNREEIKSFPASYAVARDNASLQTFLNSWLELQKSSGYVDKLYGYWILGENAKP CCHHHHCCHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHCEEEEECCCCCC QKPRWSVIKDVLHWVD CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]