Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961026
Identifier: 157961026
GI number: 157961026
Start: 1458872
End: 1459117
Strand: Direct
Name: 157961026
Synonym: Spea_1198
Alternate gene names: NA
Gene position: 1458872-1459117 (Clockwise)
Preceding gene: 157961025
Following gene: 157961027
Centisome position: 28.19
GC content: 44.31
Gene sequence:
>246_bases ATGGCTTCAATATCTGAGCAGTTATATGACGCATTGGGGATCATGATACTAGGCATGTCACTAGTATTTGTTTTTCTAAG TATTCTTATTGTTGCGATGAAATTGGTTGCTCGACAGTTTGGACCTACGCCGCCATGCGCGAGTTCGTTAACAGAGAGTC AGCCGCAATCGAGTCAATCCGCAGTGAGCCCATTAATGGCGGCGGTTATTACTGCTGCAATTCATCAGCACCGTAAAAAA GCATAA
Upstream 100 bases:
>100_bases GAAATGAATGGAATAAATTGCATAATGTGTGAATGAATAGTGAATATTTATTTTTAAAGGTTCAATACTGTTCACAACTT CATACCAATGAGAGGAAGAG
Downstream 100 bases:
>100_bases TAAAAGTAGGGAGTTTTTGTATGAGCAAGCCATTGGCTTTAACTGATGTTGTCTTAAGAGATGCACACCAATCTATTCTC GCTACTCGTTTGCGTACCGA
Product: sodium pump decarboxylase subunit gamma
Products: NA
Alternate protein names: Oxaloacetate Decarboxylase Subunit Gamma; Sodium Pump Decarboxylase Subunit Gamma
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MASISEQLYDALGIMILGMSLVFVFLSILIVAMKLVARQFGPTPPCASSLTESQPQSSQSAVSPLMAAVITAAIHQHRKK A
Sequences:
>Translated_81_residues MASISEQLYDALGIMILGMSLVFVFLSILIVAMKLVARQFGPTPPCASSLTESQPQSSQSAVSPLMAAVITAAIHQHRKK A >Mature_80_residues ASISEQLYDALGIMILGMSLVFVFLSILIVAMKLVARQFGPTPPCASSLTESQPQSSQSAVSPLMAAVITAAIHQHRKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8600; Mature: 8469
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASISEQLYDALGIMILGMSLVFVFLSILIVAMKLVARQFGPTPPCASSLTESQPQSSQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH AVSPLMAAVITAAIHQHRKKA HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASISEQLYDALGIMILGMSLVFVFLSILIVAMKLVARQFGPTPPCASSLTESQPQSSQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHH AVSPLMAAVITAAIHQHRKKA HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA