| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hemH2 [H]
Identifier: 157960958
GI number: 157960958
Start: 1367696
End: 1368709
Strand: Direct
Name: hemH2 [H]
Synonym: Spea_1130
Alternate gene names: 157960958
Gene position: 1367696-1368709 (Clockwise)
Preceding gene: 157960957
Following gene: 157960963
Centisome position: 26.43
GC content: 49.7
Gene sequence:
>1014_bases TTGGCTAAGTATTTAGGATTGACCAAGGACGTCGGCCACCAAGTACGTGGCAAGACGGGGGTGTTATTAGTTAATTTAGG CACTCCAGATGAACCAACCCCCTCGGCGCTCAGGCGTTATTTGGCGGAGTTCCTAGCCGATCCCCGTGTAGTTGAGATCC CGAAACTCGTTTGGATGCTTATCTTGCACGGTATTATCTTACGAGTTCGTCCAGCAAAATCAGCGGCGCTTTATAAACAG GTGTGGACCGAGCAGGGCTCGCCGTTGATGGATATTACTCGCCGCCAAGCCCAAAAGCTGGCTGAGCACTTTGAAAAGAG CGGCGAGGATGTCTCGGTGGACTTTTGTATGCGTTACGGCCAGCCGTCGGTGTCATCGACGCTGCAAAGAATGCATCAAG AGGGCGTAGACAAGATGGTGATATTGCCTCTGTATCCGCAATACTCGGCGCCAACAACGGCGTCAGCTTTCGATGCAATC GCCAAAGAGCTTGCTACTTGGCGGTATCTGCCTGCGCTACATTTTATCAATAGCTATCATGACCATCCTGACTTTATCGA TGCACTAGCGGCATCTATCGCTAAAGACTTTGAGCTTAATGGTCAGCCGCAAAAGCTCGTGCTGTCATATCACGGTATGC CGGAGCGAAACCTCCACTTGGGCGATCCCTATTATTGTTTCTGTATGAAGACGACTAAGCTGGTGGTCGAGAAGTTGGGA CTAACTGGAGATCAGTATATAACCACCTTCCAATCTCGCTTCGGTAAAGCCAAATGGCTGACGCCCTATACCGATGCCAC CATGGAAGCGCTACCTAGTCAGGGGATTAAAGACATTGCCGTGGTATGCCCAGCCTTTAGCGCCGATTGTTTAGAGACGT TAGAGGAGATCGCTGGCGAAAATCGTGAGATCTTCGAACAGGCGGGTGGTGAAGAGTATCGATATATTGCCGCATTAAAT GATAACGATGACCATATTCAGATGATGGCGAATATCGTTAAGCCGCATATTTAG
Upstream 100 bases:
>100_bases TGGCAATATATTCAATTGCCAGCTTTTTTTACGGCCCGTGTTGAACTCAAAGCAGATTAAAACGTATCTGTAGATAATAT TCAAAGGTTAAGGAGTTATC
Downstream 100 bases:
>100_bases GCGTGTTTACTTCGTGTTCTCCGTGTAGCAAACGAAGAGAGCGCTTCGTGGTAAATAGCTTTTAAAGCAAAGAACCCAGC TTGTGCTGGGTTCTTTGATT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase 2; Protoheme ferro-lyase 2 [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAKYLGLTKDVGHQVRGKTGVLLVNLGTPDEPTPSALRRYLAEFLADPRVVEIPKLVWMLILHGIILRVRPAKSAALYKQ VWTEQGSPLMDITRRQAQKLAEHFEKSGEDVSVDFCMRYGQPSVSSTLQRMHQEGVDKMVILPLYPQYSAPTTASAFDAI AKELATWRYLPALHFINSYHDHPDFIDALAASIAKDFELNGQPQKLVLSYHGMPERNLHLGDPYYCFCMKTTKLVVEKLG LTGDQYITTFQSRFGKAKWLTPYTDATMEALPSQGIKDIAVVCPAFSADCLETLEEIAGENREIFEQAGGEEYRYIAALN DNDDHIQMMANIVKPHI
Sequences:
>Translated_337_residues MAKYLGLTKDVGHQVRGKTGVLLVNLGTPDEPTPSALRRYLAEFLADPRVVEIPKLVWMLILHGIILRVRPAKSAALYKQ VWTEQGSPLMDITRRQAQKLAEHFEKSGEDVSVDFCMRYGQPSVSSTLQRMHQEGVDKMVILPLYPQYSAPTTASAFDAI AKELATWRYLPALHFINSYHDHPDFIDALAASIAKDFELNGQPQKLVLSYHGMPERNLHLGDPYYCFCMKTTKLVVEKLG LTGDQYITTFQSRFGKAKWLTPYTDATMEALPSQGIKDIAVVCPAFSADCLETLEEIAGENREIFEQAGGEEYRYIAALN DNDDHIQMMANIVKPHI >Mature_336_residues AKYLGLTKDVGHQVRGKTGVLLVNLGTPDEPTPSALRRYLAEFLADPRVVEIPKLVWMLILHGIILRVRPAKSAALYKQV WTEQGSPLMDITRRQAQKLAEHFEKSGEDVSVDFCMRYGQPSVSSTLQRMHQEGVDKMVILPLYPQYSAPTTASAFDAIA KELATWRYLPALHFINSYHDHPDFIDALAASIAKDFELNGQPQKLVLSYHGMPERNLHLGDPYYCFCMKTTKLVVEKLGL TGDQYITTFQSRFGKAKWLTPYTDATMEALPSQGIKDIAVVCPAFSADCLETLEEIAGENREIFEQAGGEEYRYIAALND NDDHIQMMANIVKPHI
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=330, Percent_Identity=27.5757575757576, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI60499021, Length=330, Percent_Identity=27.5757575757576, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1786681, Length=316, Percent_Identity=48.4177215189873, Blast_Score=301, Evalue=3e-83, Organism=Saccharomyces cerevisiae, GI6324750, Length=339, Percent_Identity=25.3687315634218, Blast_Score=97, Evalue=3e-21, Organism=Drosophila melanogaster, GI17864156, Length=333, Percent_Identity=27.3273273273273, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24651774, Length=264, Percent_Identity=25.7575757575758, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI45552018, Length=168, Percent_Identity=29.7619047619048, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 37893; Mature: 37762
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYLGLTKDVGHQVRGKTGVLLVNLGTPDEPTPSALRRYLAEFLADPRVVEIPKLVWML CCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILHGIILRVRPAKSAALYKQVWTEQGSPLMDITRRQAQKLAEHFEKSGEDVSVDFCMRYG HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCC QPSVSSTLQRMHQEGVDKMVILPLYPQYSAPTTASAFDAIAKELATWRYLPALHFINSYH CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHPDFIDALAASIAKDFELNGQPQKLVLSYHGMPERNLHLGDPYYCFCMKTTKLVVEKLG CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHC LTGDQYITTFQSRFGKAKWLTPYTDATMEALPSQGIKDIAVVCPAFSADCLETLEEIAGE CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCC NREIFEQAGGEEYRYIAALNDNDDHIQMMANIVKPHI CHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure AKYLGLTKDVGHQVRGKTGVLLVNLGTPDEPTPSALRRYLAEFLADPRVVEIPKLVWML CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHH ILHGIILRVRPAKSAALYKQVWTEQGSPLMDITRRQAQKLAEHFEKSGEDVSVDFCMRYG HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCC QPSVSSTLQRMHQEGVDKMVILPLYPQYSAPTTASAFDAIAKELATWRYLPALHFINSYH CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHPDFIDALAASIAKDFELNGQPQKLVLSYHGMPERNLHLGDPYYCFCMKTTKLVVEKLG CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHC LTGDQYITTFQSRFGKAKWLTPYTDATMEALPSQGIKDIAVVCPAFSADCLETLEEIAGE CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCC NREIFEQAGGEEYRYIAALNDNDDHIQMMANIVKPHI CHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]