Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157960872
Identifier: 157960872
GI number: 157960872
Start: 1266453
End: 1267511
Strand: Direct
Name: 157960872
Synonym: Spea_1044
Alternate gene names: NA
Gene position: 1266453-1267511 (Clockwise)
Preceding gene: 157960869
Following gene: 157960873
Centisome position: 24.47
GC content: 42.97
Gene sequence:
>1059_bases ATGTCGTTTATCACTAGAACAAAGCGTTATATCTCTCTAATGGGGATAATTATCAGTGCTGTAGCTGTAGCTCTAGCGGG GTGCAGCGGCGATATACAGCTTCCTATTAGTGAGGACGACCTAAATCAAACTAAGTGTAACGCGCAATATCAAAGTGATT GCCCTGAGTCTTATCGTGGCAAGTTTTTTACTGGCATTACGACCAATTATGCTTATGGCAAGGCGTTTTATAGAGCGACT CAGTATAAAGATGGACTCGAGCATGGCTATAGCTTCTCGACGCTCAACAATCAACTCAATGAAACCGCTTGGTATAAGGC GGGTAAGTTAGATGGCAAACAGATCAGTTACCACTTTTCGACCACAGGAAAGCCGCAATGGGTGAGGCTTTATCAAGCTG GCGTAAAAACGGAGCATTGGCTTTATGATGAGCAGGGCGTAATCCTCAGCTATAAGCGTTTTGAAGGCGGTAAAGAGGTC GAGAGCATCAGTTATGAGAAGGGCCGTGAATGGCGCCTGTATTATTTTGTTGAGGGTGAAAAGCGCCAGCGTCACAAGGA CTATTATGCGAGTGGTCAGCTTGAGAGTAATAGTGAATTCATTTATGCCGATTATAAAAAACTTAATGAGAAAACTTACT ATCGTAGTGGTCGTTTAAGAAGTAAATTTAACTTCGACAGGGCAACCAATACTGGCATATTCGAAACCTACGGTTCAGAT GGTAAGCGCCGCTCAGAGCAGCATTATGGCTATAACCCACTAAATACTCGCCATGGAGTGCAGTTAACTTTTTGTGGTGA AAATGGTCAAGTTGACTCTATCGAGCATTACAATATGGGCGTAGAAGATGGTGAATTTGCTAAATATCACTGTAATGGTC AGCTGCAAAATAAGCGCACTTATGCCAACGGCGTGGTGATTGATAAACAGATTAAAACCTATGATGAGAATGGTCTGGTG GTGTTTATTGATAAGCTCGATGGTAAAGGCAAGGTCACACAAAAAAGCTACTATGATGATGAATCTGCTAAGTGGGTGAC CTATTCGACGACGGACTAG
Upstream 100 bases:
>100_bases TCTGTGTATTCTGCAGCTGTTTTATCTAAGTTTATGTTTTACCTGATGCTAGTAAACCTAGGATCTAGACTATTAAAATT TAATTACAAGAGTAACCCTG
Downstream 100 bases:
>100_bases TAGTAAGGTTAATTTTTATGAGAAACATACCTACTCAGCATTAGCTGCTTTATTGTCGGCCTATGCAACCTAAAAGGCTA TTTTGAACTTTTACTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSFITRTKRYISLMGIIISAVAVALAGCSGDIQLPISEDDLNQTKCNAQYQSDCPESYRGKFFTGITTNYAYGKAFYRAT QYKDGLEHGYSFSTLNNQLNETAWYKAGKLDGKQISYHFSTTGKPQWVRLYQAGVKTEHWLYDEQGVILSYKRFEGGKEV ESISYEKGREWRLYYFVEGEKRQRHKDYYASGQLESNSEFIYADYKKLNEKTYYRSGRLRSKFNFDRATNTGIFETYGSD GKRRSEQHYGYNPLNTRHGVQLTFCGENGQVDSIEHYNMGVEDGEFAKYHCNGQLQNKRTYANGVVIDKQIKTYDENGLV VFIDKLDGKGKVTQKSYYDDESAKWVTYSTTD
Sequences:
>Translated_352_residues MSFITRTKRYISLMGIIISAVAVALAGCSGDIQLPISEDDLNQTKCNAQYQSDCPESYRGKFFTGITTNYAYGKAFYRAT QYKDGLEHGYSFSTLNNQLNETAWYKAGKLDGKQISYHFSTTGKPQWVRLYQAGVKTEHWLYDEQGVILSYKRFEGGKEV ESISYEKGREWRLYYFVEGEKRQRHKDYYASGQLESNSEFIYADYKKLNEKTYYRSGRLRSKFNFDRATNTGIFETYGSD GKRRSEQHYGYNPLNTRHGVQLTFCGENGQVDSIEHYNMGVEDGEFAKYHCNGQLQNKRTYANGVVIDKQIKTYDENGLV VFIDKLDGKGKVTQKSYYDDESAKWVTYSTTD >Mature_351_residues SFITRTKRYISLMGIIISAVAVALAGCSGDIQLPISEDDLNQTKCNAQYQSDCPESYRGKFFTGITTNYAYGKAFYRATQ YKDGLEHGYSFSTLNNQLNETAWYKAGKLDGKQISYHFSTTGKPQWVRLYQAGVKTEHWLYDEQGVILSYKRFEGGKEVE SISYEKGREWRLYYFVEGEKRQRHKDYYASGQLESNSEFIYADYKKLNEKTYYRSGRLRSKFNFDRATNTGIFETYGSDG KRRSEQHYGYNPLNTRHGVQLTFCGENGQVDSIEHYNMGVEDGEFAKYHCNGQLQNKRTYANGVVIDKQIKTYDENGLVV FIDKLDGKGKVTQKSYYDDESAKWVTYSTTD
Specific function: Unknown
COG id: COG2849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40658; Mature: 40527
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFITRTKRYISLMGIIISAVAVALAGCSGDIQLPISEDDLNQTKCNAQYQSDCPESYRG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHCCCCHHHCC KFFTGITTNYAYGKAFYRATQYKDGLEHGYSFSTLNNQLNETAWYKAGKLDGKQISYHFS CEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHEECCCCCCCEEEEEEE TTGKPQWVRLYQAGVKTEHWLYDEQGVILSYKRFEGGKEVESISYEKGREWRLYYFVEGE CCCCCCEEEEEHHCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECC KRQRHKDYYASGQLESNSEFIYADYKKLNEKTYYRSGRLRSKFNFDRATNTGIFETYGSD HHHHHCCCCCCCEECCCCCEEEEEHHHCCCHHHECCCCCCCCCCCCCCCCCCEEEECCCC GKRRSEQHYGYNPLNTRHGVQLTFCGENGQVDSIEHYNMGVEDGEFAKYHCNGQLQNKRT CCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCEEEEEECCEECCCEE YANGVVIDKQIKTYDENGLVVFIDKLDGKGKVTQKSYYDDESAKWVTYSTTD ECCCEEEECEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure SFITRTKRYISLMGIIISAVAVALAGCSGDIQLPISEDDLNQTKCNAQYQSDCPESYRG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHCCCCHHHCC KFFTGITTNYAYGKAFYRATQYKDGLEHGYSFSTLNNQLNETAWYKAGKLDGKQISYHFS CEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHEECCCCCCCEEEEEEE TTGKPQWVRLYQAGVKTEHWLYDEQGVILSYKRFEGGKEVESISYEKGREWRLYYFVEGE CCCCCCEEEEEHHCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECC KRQRHKDYYASGQLESNSEFIYADYKKLNEKTYYRSGRLRSKFNFDRATNTGIFETYGSD HHHHHCCCCCCCEECCCCCEEEEEHHHCCCHHHECCCCCCCCCCCCCCCCCCEEEECCCC GKRRSEQHYGYNPLNTRHGVQLTFCGENGQVDSIEHYNMGVEDGEFAKYHCNGQLQNKRT CCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCEEEEEECCEECCCEE YANGVVIDKQIKTYDENGLVVFIDKLDGKGKVTQKSYYDDESAKWVTYSTTD ECCCEEEECEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA