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The map label for this gene is rseB [H]

Identifier: 157960861

GI number: 157960861

Start: 1255722

End: 1256654

Strand: Direct

Name: rseB [H]

Synonym: Spea_1033

Alternate gene names: 157960861

Gene position: 1255722-1256654 (Clockwise)

Preceding gene: 157960860

Following gene: 157960862

Centisome position: 24.27

GC content: 47.27

Gene sequence:

>933_bases
TTGCGTCTAATCCTATTGGCTATTATAGCCATGAGTTTTCCCGCGATGGCGCGGGAAGACATGCCCGCCAAAGCTTGGCT
AGAAAATATGAGCCAAGCCCTGCGTGAACAAGAATTTAAAATTTCCCTTATCCAACTTCAGGCAGACCATATCCGCCCTC
TGGTTTATATACACGGTAAAGTTGAAGATGAAGAAGTGGCCTTTTTAGAACATCTAAATGGACCACCTAAAAATGCTGTG
CGTGTGGGTAATACCGTGACCTTCATTGAGCATGACCAACCCGCTTATAGTGTTCACTCTAATCGCATTCAGGGCGTTAT
CCCTGGAGCATTAGCCGACGATGTCTCCAAGCTGGAAGAGGGCTATCAGTTCGTGTTGGGTGGTCGTAGCCGAATTGCAG
GTCGACCAGGTCAGCTTGTACGTATCATTCCGACCGACAATAACCGTTATGGTTATCAAGTTTGGATGGATATGGATACA
TACTTGCCGCTGCGTTTCGACATGATAAGTGGTGACAAACAACTATTAGAGCAGCTGTTAGTGGTTGAACTATTAGTGCT
TGATGAAGTACCTGCTATTCTAAAAGAAGCCTACAAGCAGGAGTGGCCTCCTGTCTTGTCTCAATCAGACAGAGACGGCG
GCGAAGACTGGCAGTTTAGCTGGTTACCAGCAGGCTTTAAGGTGCTGATTAAAGATCAACACAGGCTAATAGGCAGTAAG
GAAGCGGTTGAGTACATAGCCATAAGTGATGGTCTAGCTCATATTTCTGTTTACGTTGCCAAGGCGGGGGAGGCACCACT
GCCAGAGGAGTTAGTGACCCGCAATGGATTATCACTTGCAACAGAGCGAGTTGGTAATGCCGAGGTGGTTGCAGTGGGTA
AGGTTCCTGCTGAGACCTTGAGTCGCATTGCTAAAAGCATCATGTTGCAGTGA

Upstream 100 bases:

>100_bases
TCAAGATCATATGTTGCAACAAAGATTGAATAATGGAGTGAATATCGACGACAATAGCGAGGTCGATACTACACCTGTTG
CTCAATAATGAGGAGTTAGC

Downstream 100 bases:

>100_bases
TGAAGGTTCTATCATGATGGAAGAAATCGCTAGAGTTGTCGCTAATGGCAACTCTGGTTGGGTCGTTGTTGAAGTTGAGA
TGAAGAGTGCCTGTAATCAT

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVEDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVHSNRIQGVIPGALADDVSKLEEGYQFVLGGRSRIAGRPGQLVRIIPTDNNRYGYQVWMDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPPVLSQSDRDGGEDWQFSWLPAGFKVLIKDQHRLIGSK
EAVEYIAISDGLAHISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ

Sequences:

>Translated_310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVEDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVHSNRIQGVIPGALADDVSKLEEGYQFVLGGRSRIAGRPGQLVRIIPTDNNRYGYQVWMDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPPVLSQSDRDGGEDWQFSWLPAGFKVLIKDQHRLIGSK
EAVEYIAISDGLAHISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ
>Mature_310_residues
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGKVEDEEVAFLEHLNGPPKNAV
RVGNTVTFIEHDQPAYSVHSNRIQGVIPGALADDVSKLEEGYQFVLGGRSRIAGRPGQLVRIIPTDNNRYGYQVWMDMDT
YLPLRFDMISGDKQLLEQLLVVELLVLDEVPAILKEAYKQEWPPVLSQSDRDGGEDWQFSWLPAGFKVLIKDQHRLIGSK
EAVEYIAISDGLAHISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETLSRIAKSIMLQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=298, Percent_Identity=29.1946308724832, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 34601; Mature: 34601

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGK
CHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHCCEEEEEECC
VEDEEVAFLEHLNGPPKNAVRVGNTVTFIEHDQPAYSVHSNRIQGVIPGALADDVSKLEE
CCCHHHHHHHHCCCCCCHHEEECCEEEEEECCCCCCHHHCCCCCEEECCHHHHHHHHHHH
GYQFVLGGRSRIAGRPGQLVRIIPTDNNRYGYQVWMDMDTYLPLRFDMISGDKQLLEQLL
CCEEEECCCHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHH
VVELLVLDEVPAILKEAYKQEWPPVLSQSDRDGGEDWQFSWLPAGFKVLIKDQHRLIGSK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCH
EAVEYIAISDGLAHISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETL
HHHEEEEECCCCEEEEEEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHH
SRIAKSIMLQ
HHHHHHHCCC
>Mature Secondary Structure
MRLILLAIIAMSFPAMAREDMPAKAWLENMSQALREQEFKISLIQLQADHIRPLVYIHGK
CHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHCCEEEEEECC
VEDEEVAFLEHLNGPPKNAVRVGNTVTFIEHDQPAYSVHSNRIQGVIPGALADDVSKLEE
CCCHHHHHHHHCCCCCCHHEEECCEEEEEECCCCCCHHHCCCCCEEECCHHHHHHHHHHH
GYQFVLGGRSRIAGRPGQLVRIIPTDNNRYGYQVWMDMDTYLPLRFDMISGDKQLLEQLL
CCEEEECCCHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHH
VVELLVLDEVPAILKEAYKQEWPPVLSQSDRDGGEDWQFSWLPAGFKVLIKDQHRLIGSK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCH
EAVEYIAISDGLAHISVYVAKAGEAPLPEELVTRNGLSLATERVGNAEVVAVGKVPAETL
HHHEEEEECCCCEEEEEEEEECCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHH
SRIAKSIMLQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]