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The map label for this gene is rseC [H]

Identifier: 157960862

GI number: 157960862

Start: 1256668

End: 1257132

Strand: Direct

Name: rseC [H]

Synonym: Spea_1034

Alternate gene names: 157960862

Gene position: 1256668-1257132 (Clockwise)

Preceding gene: 157960861

Following gene: 157960863

Centisome position: 24.29

GC content: 43.87

Gene sequence:

>465_bases
ATGATGGAAGAAATCGCTAGAGTTGTCGCTAATGGCAACTCTGGTTGGGTCGTTGTTGAAGTTGAGATGAAGAGTGCCTG
TAATCATTGTGAAAGCGGTGATTCTTGTGGCACATCTGCCGTTTCAAAAGCCTTTTCGCCTAAAGTACAACGTTTTTCAA
TTCAGAGTGATCGGCAGTTTGTTAAAGGCGAGCGCTTAAAACTGGGTTTACCGGAAAGCGTAATCTTAAAAGCAGCAACC
TTAGTCTATATTTTACCGCTTATTGGGTTGTTTATTGGCGCTTTCAGCGCTAATCAAATCGGCTCTTTAATAGGAAGCGC
TTCTGAACTGTTATCTATTTCGGGAGCATTAGTCGGTAGTTTCTGTTTCTGGGCTGTCGGAAAAAAAGCGGCCAAGAGAT
TAGAAGCGCAGGCGCAGCCTGTCATTATCAAGTCTCTGGGCAAGCCTATCGAGATAGCTAATTAG

Upstream 100 bases:

>100_bases
CGAGTTGGTAATGCCGAGGTGGTTGCAGTGGGTAAGGTTCCTGCTGAGACCTTGAGTCGCATTGCTAAAAGCATCATGTT
GCAGTGATGAAGGTTCTATC

Downstream 100 bases:

>100_bases
GCACAACACTGGCCATTAGTTATTATTCCTCAGTTATCAGACTATAAAAATTGGTATTAAAGCTGCGATCGGGTACAATT
CTGCACTTTAAAATTTTTAT

Product: positive regulator of sigma E, RseC/MucC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMEEIARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSDRQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFSANQIGSLIGSASELLSISGALVGSFCFWAVGKKAAKRLEAQAQPVIIKSLGKPIEIAN

Sequences:

>Translated_154_residues
MMEEIARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSDRQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFSANQIGSLIGSASELLSISGALVGSFCFWAVGKKAAKRLEAQAQPVIIKSLGKPIEIAN
>Mature_154_residues
MMEEIARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSDRQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFSANQIGSLIGSASELLSISGALVGSFCFWAVGKKAAKRLEAQAQPVIIKSLGKPIEIAN

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=147, Percent_Identity=29.9319727891156, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16284; Mature: 16284

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEEIARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSDRQF
CHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHH
VKGERLKLGLPESVILKAATLVYILPLIGLFIGAFSANQIGSLIGSASELLSISGALVGS
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FCFWAVGKKAAKRLEAQAQPVIIKSLGKPIEIAN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MMEEIARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSDRQF
CHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHH
VKGERLKLGLPESVILKAATLVYILPLIGLFIGAFSANQIGSLIGSASELLSISGALVGS
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FCFWAVGKKAAKRLEAQAQPVIIKSLGKPIEIAN
HHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]