Click here to switch to the map view.

The map label for this gene is 157960782

Identifier: 157960782

GI number: 157960782

Start: 1164302

End: 1164634

Strand: Direct

Name: 157960782

Synonym: Spea_0954

Alternate gene names: NA

Gene position: 1164302-1164634 (Clockwise)

Preceding gene: 157960780

Following gene: 157960783

Centisome position: 22.5

GC content: 43.54

Gene sequence:

>333_bases
ATGAATCGATTACCTCTATTGATAATCCTGATTTTTGGGTCAGCAAGCGCATCGGCAGATTACGACCCCAGCTTTAAAAT
CGGCAAAGAGAAAGCCAAAGTTTGCATGACCTGTCATGGAGAGGATGGGATCTCAACAATCGACCCTTATCCCAATTTAC
GCGGTCAAAAAGTGGGGTATTTAATATCGGCGCTTAAAGATTACCAGTCAAGGCAGCGTACTAGTGGCTTGGCCATTTTG
ATGCAGCAACAAGCAGATACGCTTAGCGAACAGGATATGAAAGACATTTCCTACTATTACTCTGTGTTAGGCACAAAACA
AGAAGAGGAGTAG

Upstream 100 bases:

>100_bases
AAAACCTAGTGATATTTCGGTGGATAATTGCACAAATTGTGGCAAATAAATCAATACCGACTAGTTTCAATAAGGTGCAT
AAGAAGATAAGGGAATGCTT

Downstream 100 bases:

>100_bases
GGCATGCAGGTAAGCACTGAGCAATATGACGTAAAGGTTGTTCGTTATTTTATTGTGGCTGCCGTTATTTGGTCTATTGC
GGGTATGTTTATTGGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNRLPLLIILIFGSASASADYDPSFKIGKEKAKVCMTCHGEDGISTIDPYPNLRGQKVGYLISALKDYQSRQRTSGLAIL
MQQQADTLSEQDMKDISYYYSVLGTKQEEE

Sequences:

>Translated_110_residues
MNRLPLLIILIFGSASASADYDPSFKIGKEKAKVCMTCHGEDGISTIDPYPNLRGQKVGYLISALKDYQSRQRTSGLAIL
MQQQADTLSEQDMKDISYYYSVLGTKQEEE
>Mature_110_residues
MNRLPLLIILIFGSASASADYDPSFKIGKEKAKVCMTCHGEDGISTIDPYPNLRGQKVGYLISALKDYQSRQRTSGLAIL
MQQQADTLSEQDMKDISYYYSVLGTKQEEE

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12288; Mature: 12288

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLPLLIILIFGSASASADYDPSFKIGKEKAKVCMTCHGEDGISTIDPYPNLRGQKVGY
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
LISALKDYQSRQRTSGLAILMQQQADTLSEQDMKDISYYYSVLGTKQEEE
HHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRLPLLIILIFGSASASADYDPSFKIGKEKAKVCMTCHGEDGISTIDPYPNLRGQKVGY
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
LISALKDYQSRQRTSGLAILMQQQADTLSEQDMKDISYYYSVLGTKQEEE
HHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]