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The map label for this gene is 157960755

Identifier: 157960755

GI number: 157960755

Start: 1136395

End: 1137012

Strand: Reverse

Name: 157960755

Synonym: Spea_0927

Alternate gene names: NA

Gene position: 1137012-1136395 (Counterclockwise)

Preceding gene: 157960756

Following gene: 157960751

Centisome position: 21.97

GC content: 45.79

Gene sequence:

>618_bases
ATGACAAAAGCTCAAGTATCAACGGGTGTGATAGACAGTTGGAATGACGATAAGGGATTTGGTTTTATTCAAATCCCAGA
GCAAAAACAGCAGGTTTTTCTTCATATTTCAGCCTTTGCTAGTCAGAGTCCTAGGCCGCAAAGCGGTAAGCAAGTCCAAT
TTACCTTAGCTAAAGACAAGCAAGGTAAGTGGCGCGCTGAAAAAGCGCAACTGCTCAGTGGCGGCAGCGTAAAGTCGAGC
CGAAAAATTAGCAGCAAACCAAATCGATTAAGCATAACTGTGGCTCTCGGCTTTTTTGCCACCTTGAGCATTAGCTACTC
ACTACAACACACCCCTCTTTGGCTTCTGCTCTACTTTATCTCGGCGAGCCTAGTGACCTTTATCGCCTATGGTTGGGATA
AACGAGCAGCCAAGAAGCAAGGTTGGCGTGTCAGTGAATTAAAGCTGCACCTATTAAGTGTGGCTGGTGGCTGGCCCGGT
GCACTGCTTGCCCAACAGTGGCTCAGACACAAGTCGGCTAAGAGCAGATTTAAGTTTATCCTGTGGTTAACGATAAGCAT
AAATCTAGCACTTATTTATCTTATCCATCGGCCAGAGTTGAACACAGTGTTAAGCTAA

Upstream 100 bases:

>100_bases
TGGAAGGTCTTATTCAGTTCTTGCAAGATGAGTGCTGCACTGGAGAGTCTTGTTAACAACGCGTGGTTAGATCCTAGTGA
ATAGAAGTAGATAGATCTCG

Downstream 100 bases:

>100_bases
AGCAAATAAAAAAAGCAGCCCAAATTAGCGGCTGCTTTTTTCGTTTAAACTGAGTCAATTGTGCTTAAAAAAGCTTAAGG
TGTCACGGTTACCTCTGCCG

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTKAQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPRPQSGKQVQFTLAKDKQGKWRAEKAQLLSGGSVKSS
RKISSKPNRLSITVALGFFATLSISYSLQHTPLWLLLYFISASLVTFIAYGWDKRAAKKQGWRVSELKLHLLSVAGGWPG
ALLAQQWLRHKSAKSRFKFILWLTISINLALIYLIHRPELNTVLS

Sequences:

>Translated_205_residues
MTKAQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPRPQSGKQVQFTLAKDKQGKWRAEKAQLLSGGSVKSS
RKISSKPNRLSITVALGFFATLSISYSLQHTPLWLLLYFISASLVTFIAYGWDKRAAKKQGWRVSELKLHLLSVAGGWPG
ALLAQQWLRHKSAKSRFKFILWLTISINLALIYLIHRPELNTVLS
>Mature_204_residues
TKAQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPRPQSGKQVQFTLAKDKQGKWRAEKAQLLSGGSVKSSR
KISSKPNRLSITVALGFFATLSISYSLQHTPLWLLLYFISASLVTFIAYGWDKRAAKKQGWRVSELKLHLLSVAGGWPGA
LLAQQWLRHKSAKSRFKFILWLTISINLALIYLIHRPELNTVLS

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23040; Mature: 22909

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKAQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPRPQSGKQVQFTLAKDK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCCEEEEEEECCC
QGKWRAEKAQLLSGGSVKSSRKISSKPNRLSITVALGFFATLSISYSLQHTPLWLLLYFI
CCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEHEEEEEEEEECCCHHHHHHHHH
SASLVTFIAYGWDKRAAKKQGWRVSELKLHLLSVAGGWPGALLAQQWLRHKSAKSRFKFI
HHHHHHHHHHCCCHHHHHHCCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEE
LWLTISINLALIYLIHRPELNTVLS
EEEEEEEEEEEEEEEECCCHHHHCC
>Mature Secondary Structure 
TKAQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPRPQSGKQVQFTLAKDK
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCCEEEEEEECCC
QGKWRAEKAQLLSGGSVKSSRKISSKPNRLSITVALGFFATLSISYSLQHTPLWLLLYFI
CCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEHEEEEEEEEECCCHHHHHHHHH
SASLVTFIAYGWDKRAAKKQGWRVSELKLHLLSVAGGWPGALLAQQWLRHKSAKSRFKFI
HHHHHHHHHHCCCHHHHHHCCCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEE
LWLTISINLALIYLIHRPELNTVLS
EEEEEEEEEEEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA